RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 TNFAIP1Q13829 316 aa16.04■□□□□ 0.16
PRKAB1-201ENST00000229328 SYCP1Q15431 976 aa16.04■□□□□ 0.16
PRKAB1-201ENST00000229328 NBPF12Q5TAG4 269 aaPredicted RBP16.04■□□□□ 0.16
PRKAB1-201ENST00000229328 MYOCDQ8IZQ8 938 aa16.04■□□□□ 0.16
PRKAB1-201ENST00000229328 ERMNQ8TAM6 284 aa16.04■□□□□ 0.16
PRKAB1-201ENST00000229328 RGL1Q9NZL6 768 aa16.04■□□□□ 0.16
PRKAB1-201ENST00000229328 ERCC3P19447 782 aa16.03■□□□□ 0.16
PRKAB1-201ENST00000229328 NCBP1Q09161 790 aaKnown RBP16.03■□□□□ 0.16
PRKAB1-201ENST00000229328 KIF4BQ2VIQ3 1234 aa16.03■□□□□ 0.16
PRKAB1-201ENST00000229328 LRRC55Q6ZSA7 311 aa16.03■□□□□ 0.16
PRKAB1-201ENST00000229328 WDR24Q96S15 920 aa16.03■□□□□ 0.16
PRKAB1-201ENST00000229328 CHP1Q99653 195 aa16.03■□□□□ 0.16
PRKAB1-201ENST00000229328 DEFB129Q9H1M3 183 aa16.03■□□□□ 0.16
PRKAB1-201ENST00000229328 PHLPP2Q6ZVD8 1323 aa16.03■□□□□ 0.16
PRKAB1-201ENST00000229328 FZD9O00144 591 aa16.03■□□□□ 0.16
PRKAB1-201ENST00000229328 CCDC175P0C221 793 aa16.03■□□□□ 0.16
PRKAB1-201ENST00000229328 LRRC63Q05C16 580 aa16.03■□□□□ 0.16
PRKAB1-201ENST00000229328 HERC4Q5GLZ8 1057 aaPredicted RBP16.03■□□□□ 0.16
PRKAB1-201ENST00000229328 CCDC65Q8IXS2 484 aa16.03■□□□□ 0.16
PRKAB1-201ENST00000229328 EIF2AK1Q9BQI3 630 aaKnown RBP16.03■□□□□ 0.16
PRKAB1-201ENST00000229328 L2HGDHQ9H9P8 463 aa16.03■□□□□ 0.16
PRKAB1-201ENST00000229328 DNM3Q9UQ16 869 aa16.03■□□□□ 0.16
PRKAB1-201ENST00000229328 ABCB11O95342 1321 aa16.03■□□□□ 0.16
PRKAB1-201ENST00000229328 TUBB4AP04350 444 aa16.02■□□□□ 0.16
PRKAB1-201ENST00000229328 ZCWPW2Q504Y3 356 aa16.02■□□□□ 0.16
PRKAB1-201ENST00000229328 CCDC125Q86Z20 511 aa16.02■□□□□ 0.16
PRKAB1-201ENST00000229328 ACRBPQ8NEB7 543 aa16.02■□□□□ 0.16
PRKAB1-201ENST00000229328 IRX2Q9BZI1 471 aaPredicted RBP16.02■□□□□ 0.16
PRKAB1-201ENST00000229328 TTYH3Q9C0H2 523 aa16.02■□□□□ 0.16
PRKAB1-201ENST00000229328 ZHX3Q9H4I2 956 aa16.02■□□□□ 0.16
PRKAB1-201ENST00000229328 CCPG1Q9ULG6 757 aa16.02■□□□□ 0.16
PRKAB1-201ENST00000229328 CAPN11Q9UMQ6 739 aa16.02■□□□□ 0.16
PRKAB1-201ENST00000229328 CD2APQ9Y5K6 639 aa16.02■□□□□ 0.16
PRKAB1-201ENST00000229328 FRMD3A2A2Y4 597 aa16.02■□□□□ 0.15
PRKAB1-201ENST00000229328 CHMP2AO43633 222 aa16.02■□□□□ 0.15
PRKAB1-201ENST00000229328 ICAM1P05362 532 aa16.02■□□□□ 0.15
PRKAB1-201ENST00000229328 KRT18P05783 430 aaKnown RBP16.02■□□□□ 0.15
PRKAB1-201ENST00000229328 PRAMEF18Q5VWM3 479 aa16.02■□□□□ 0.15
PRKAB1-201ENST00000229328 OTOP1Q7RTM1 612 aa16.02■□□□□ 0.15
PRKAB1-201ENST00000229328 TMTC1Q8IUR5 882 aa16.02■□□□□ 0.15
PRKAB1-201ENST00000229328 NELFCDQ8IXH7 590 aa16.02■□□□□ 0.15
PRKAB1-201ENST00000229328 SYT2Q8N9I0 419 aaPredicted RBP16.02■□□□□ 0.15
PRKAB1-201ENST00000229328 NLGN2Q8NFZ4 835 aa16.02■□□□□ 0.15
PRKAB1-201ENST00000229328 BCAS3Q9H6U6 928 aa16.02■□□□□ 0.15
PRKAB1-201ENST00000229328 POLD4Q9HCU8 107 aa16.02■□□□□ 0.15
PRKAB1-201ENST00000229328 LZTFL1Q9NQ48 299 aa16.02■□□□□ 0.15
PRKAB1-201ENST00000229328 AGPAT5Q9NUQ2 364 aa16.02■□□□□ 0.15
PRKAB1-201ENST00000229328 COL20A1Q9P218 1284 aa16.02■□□□□ 0.15
PRKAB1-201ENST00000229328 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.02■□□□□ 0.15
PRKAB1-201ENST00000229328 FZD1Q9UP38 647 aa16.02■□□□□ 0.15
PRKAB1-201ENST00000229328 V9GYY5 206 aaPredicted RBP16.02■□□□□ 0.15
PRKAB1-201ENST00000229328 ZNF541Q9H0D2 1346 aa16.02■□□□□ 0.15
PRKAB1-201ENST00000229328 GOLGA6L9A6NEM1 432 aa16.01■□□□□ 0.15
PRKAB1-201ENST00000229328 NFIBO00712 420 aa16.01■□□□□ 0.15
PRKAB1-201ENST00000229328 PSMD10O75832 226 aa16.01■□□□□ 0.15
PRKAB1-201ENST00000229328 ARP10275 920 aa16.01■□□□□ 0.15
PRKAB1-201ENST00000229328 GNG11P61952 73 aa16.01■□□□□ 0.15
PRKAB1-201ENST00000229328 GIT2Q14161 759 aa16.01■□□□□ 0.15
PRKAB1-201ENST00000229328 LRRN4CLQ8ND94 238 aa16.01■□□□□ 0.15
PRKAB1-201ENST00000229328 HOOK2Q96ED9 719 aa16.01■□□□□ 0.15
PRKAB1-201ENST00000229328 SLF1Q9BQI6 1058 aa16.01■□□□□ 0.15
PRKAB1-201ENST00000229328 KIAA1683Q9H0B3 1180 aa16.01■□□□□ 0.15
PRKAB1-201ENST00000229328 LUC7L2Q9Y383 392 aaKnown RBP16.01■□□□□ 0.15
PRKAB1-201ENST00000229328 LTBP3Q9NS15 1303 aa16.01■□□□□ 0.15
PRKAB1-201ENST00000229328 WDR46O15213 610 aaKnown RBP16.01■□□□□ 0.15
PRKAB1-201ENST00000229328 CTNND1O60716 968 aaKnown RBP16.01■□□□□ 0.15
PRKAB1-201ENST00000229328 CTTNQ14247 550 aaKnown RBP16.01■□□□□ 0.15
PRKAB1-201ENST00000229328 CEP55Q53EZ4 464 aa16.01■□□□□ 0.15
PRKAB1-201ENST00000229328 LRCH2Q5VUJ6 765 aa16.01■□□□□ 0.15
PRKAB1-201ENST00000229328 WDR59Q6PJI9 974 aa16.01■□□□□ 0.15
PRKAB1-201ENST00000229328 CYP26C1Q6V0L0 522 aa16.01■□□□□ 0.15
PRKAB1-201ENST00000229328 CPXCR1Q8N123 301 aa16.01■□□□□ 0.15
PRKAB1-201ENST00000229328 PRPF38AQ8NAV1 312 aaKnown RBP16.01■□□□□ 0.15
PRKAB1-201ENST00000229328 OR8K1Q8NGG5 319 aa16.01■□□□□ 0.15
PRKAB1-201ENST00000229328 SCFD1Q8WVM8 642 aa16.01■□□□□ 0.15
PRKAB1-201ENST00000229328 SLC5A5Q92911 643 aa16.01■□□□□ 0.15
PRKAB1-201ENST00000229328 DNAJC7Q99615 494 aa16.01■□□□□ 0.15
PRKAB1-201ENST00000229328 REEP2Q9BRK0 252 aa16.01■□□□□ 0.15
PRKAB1-201ENST00000229328 BHMT2Q9H2M3 363 aa16.01■□□□□ 0.15
PRKAB1-201ENST00000229328 ABL1P00519 1130 aa16■□□□□ 0.15
PRKAB1-201ENST00000229328 CASP5P51878 434 aa16■□□□□ 0.15
PRKAB1-201ENST00000229328 MTMR2Q13614 643 aa16■□□□□ 0.15
PRKAB1-201ENST00000229328 VWA3BQ502W6 1294 aa16■□□□□ 0.15
PRKAB1-201ENST00000229328 CLEC4DQ8WXI8 215 aa16■□□□□ 0.15
PRKAB1-201ENST00000229328 ANKRD7Q92527 254 aa16■□□□□ 0.15
PRKAB1-201ENST00000229328 HSD17B14Q9BPX1 270 aa16■□□□□ 0.15
PRKAB1-201ENST00000229328 POLR3CQ9BUI4 534 aaPredicted RBP16■□□□□ 0.15
PRKAB1-201ENST00000229328 SLU7O95391 586 aaKnown RBP16■□□□□ 0.15
PRKAB1-201ENST00000229328 HSD17B4P51659 736 aa16■□□□□ 0.15
PRKAB1-201ENST00000229328 TEX2Q8IWB9 1127 aa16■□□□□ 0.15
PRKAB1-201ENST00000229328 PIGOQ8TEQ8 1089 aa16■□□□□ 0.15
PRKAB1-201ENST00000229328 ERGIC2Q96RQ1 377 aa16■□□□□ 0.15
PRKAB1-201ENST00000229328 TSG101Q99816 390 aa16■□□□□ 0.15
PRKAB1-201ENST00000229328 RUSC1Q9BVN2 902 aa16■□□□□ 0.15
PRKAB1-201ENST00000229328 TANGO6Q9C0B7 1094 aa16■□□□□ 0.15
PRKAB1-201ENST00000229328 NDST4Q9H3R1 872 aa16■□□□□ 0.15
PRKAB1-201ENST00000229328 RAVER2Q9HCJ3 691 aaKnown RBP16■□□□□ 0.15
PRKAB1-201ENST00000229328 EMILIN3Q9NT22 766 aa16■□□□□ 0.15
PRKAB1-201ENST00000229328 PITPNM2Q9BZ72 1349 aa16■□□□□ 0.15
PRKAB1-201ENST00000229328 RSPH10B2B2RC85 870 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms