RNA–Protein interactions for RNA: ENST00000217133.1

TUBB1-201, Transcript of tubulin beta 1 class VI, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB1, Length 3,496 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1-201ENST00000217133 NOVA2Q9UNW9 492 aaKnown RBP10.63□□□□□ -0.71
TUBB1-201ENST00000217133 SCP2P22307 547 aa10.63□□□□□ -0.71
TUBB1-201ENST00000217133 EPS15P42566 896 aa10.63□□□□□ -0.71
TUBB1-201ENST00000217133 GNAQP50148 359 aa10.63□□□□□ -0.71
TUBB1-201ENST00000217133 KRT71Q3SY84 523 aa10.63□□□□□ -0.71
TUBB1-201ENST00000217133 EMC10Q5UCC4 262 aa10.63□□□□□ -0.71
TUBB1-201ENST00000217133 LRIG3Q6UXM1 1119 aa10.63□□□□□ -0.71
TUBB1-201ENST00000217133 PNMA1Q8ND90 353 aa10.63□□□□□ -0.71
TUBB1-201ENST00000217133 BAP1Q92560 729 aa10.63□□□□□ -0.71
TUBB1-201ENST00000217133 SEC16BQ96JE7 1060 aa10.63□□□□□ -0.71
TUBB1-201ENST00000217133 NUCKS1Q9H1E3 243 aaKnown RBP10.63□□□□□ -0.71
TUBB1-201ENST00000217133 NIP7Q9Y221 180 aaKnown RBP eCLIP10.63□□□□□ -0.71
TUBB1-201ENST00000217133 RTCBQ9Y3I0 505 aaKnown RBP10.63□□□□□ -0.71
TUBB1-201ENST00000217133 TIAM2Q8IVF5 1701 aa10.63□□□□□ -0.71
TUBB1-201ENST00000217133 WNK3Q9BYP7 1800 aa10.62□□□□□ -0.71
TUBB1-201ENST00000217133 SRRM3A6NNA2 597 aaPredicted RBP10.62□□□□□ -0.71
TUBB1-201ENST00000217133 SERPING1P05155 500 aa10.62□□□□□ -0.71
TUBB1-201ENST00000217133 DDX42Q86XP3 938 aaKnown RBP eCLIP10.62□□□□□ -0.71
TUBB1-201ENST00000217133 FUKQ8N0W3 1084 aa10.62□□□□□ -0.71
TUBB1-201ENST00000217133 STAG2Q8N3U4 1231 aa10.62□□□□□ -0.71
TUBB1-201ENST00000217133 USP38Q8NB14 1042 aa10.62□□□□□ -0.71
TUBB1-201ENST00000217133 LSM14BQ9BX40 385 aaKnown RBP10.62□□□□□ -0.71
TUBB1-201ENST00000217133 ADAMTS1Q9UHI8 967 aa10.62□□□□□ -0.71
TUBB1-201ENST00000217133 CHD4Q14839 1912 aa10.62□□□□□ -0.71
TUBB1-201ENST00000217133 A0A1B0GUA9 196 aa10.62□□□□□ -0.71
TUBB1-201ENST00000217133 TRAF5O00463 557 aa10.62□□□□□ -0.71
TUBB1-201ENST00000217133 CYP2D6P10635 497 aa10.62□□□□□ -0.71
TUBB1-201ENST00000217133 PRPHP41219 470 aa10.62□□□□□ -0.71
TUBB1-201ENST00000217133 TXKP42681 527 aa10.62□□□□□ -0.71
TUBB1-201ENST00000217133 NAPAP54920 295 aa10.62□□□□□ -0.71
TUBB1-201ENST00000217133 PPP2R2AP63151 447 aa10.62□□□□□ -0.71
TUBB1-201ENST00000217133 EVX2Q03828 476 aa10.62□□□□□ -0.71
TUBB1-201ENST00000217133 KLHL30Q0D2K2 578 aa10.62□□□□□ -0.71
TUBB1-201ENST00000217133 BIRC3Q13489 604 aa10.62□□□□□ -0.71
TUBB1-201ENST00000217133 CUL1Q13616 776 aa10.62□□□□□ -0.71
TUBB1-201ENST00000217133 LRRC41Q15345 812 aa10.62□□□□□ -0.71
TUBB1-201ENST00000217133 NAB2Q15742 525 aa10.62□□□□□ -0.71
TUBB1-201ENST00000217133 CAVIN4Q5BKX8 364 aa10.62□□□□□ -0.71
TUBB1-201ENST00000217133 C6orf89Q6UWU4 347 aa10.62□□□□□ -0.71
TUBB1-201ENST00000217133 C1orf131Q8NDD1 294 aaKnown RBP10.62□□□□□ -0.71
TUBB1-201ENST00000217133 ISCUQ9H1K1 167 aa10.62□□□□□ -0.71
TUBB1-201ENST00000217133 ORC4O43929 436 aa10.61□□□□□ -0.71
TUBB1-201ENST00000217133 MTMR3Q13615 1198 aa10.61□□□□□ -0.71
TUBB1-201ENST00000217133 FAM83BQ5T0W9 1011 aa10.61□□□□□ -0.71
TUBB1-201ENST00000217133 EP400NLQ6ZTU2 488 aa10.61□□□□□ -0.71
TUBB1-201ENST00000217133 DHX37Q8IY37 1157 aaKnown RBP10.61□□□□□ -0.71
TUBB1-201ENST00000217133 PROCA1Q8NCQ7 364 aaPredicted RBP10.61□□□□□ -0.71
TUBB1-201ENST00000217133 EDEM3Q9BZQ6 932 aa10.61□□□□□ -0.71
TUBB1-201ENST00000217133 TFCP2L1Q9NZI6 479 aa10.61□□□□□ -0.71
TUBB1-201ENST00000217133 BAIAP2L1Q9UHR4 511 aa10.61□□□□□ -0.71
TUBB1-201ENST00000217133 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.61□□□□□ -0.71
TUBB1-201ENST00000217133 FRMD3A2A2Y4 597 aa10.61□□□□□ -0.71
TUBB1-201ENST00000217133 C21orf2O43822 256 aa10.61□□□□□ -0.71
TUBB1-201ENST00000217133 CAMTA2O94983 1202 aa10.61□□□□□ -0.71
TUBB1-201ENST00000217133 SLC8A1P32418 973 aa10.61□□□□□ -0.71
TUBB1-201ENST00000217133 ERVK-9P63128 1117 aa10.61□□□□□ -0.71
TUBB1-201ENST00000217133 TFAP4Q01664 338 aa10.61□□□□□ -0.71
TUBB1-201ENST00000217133 LRRC63Q05C16 580 aa10.61□□□□□ -0.71
TUBB1-201ENST00000217133 SF3A3Q12874 501 aaKnown RBP eCLIP10.61□□□□□ -0.712e-8■■■□□ 17.3
TUBB1-201ENST00000217133 NAA25Q14CX7 972 aa10.61□□□□□ -0.71
TUBB1-201ENST00000217133 NONOQ15233 471 aaKnown RBP eCLIP10.61□□□□□ -0.71
TUBB1-201ENST00000217133 ANKRD20A8PQ5CZ79 823 aa10.61□□□□□ -0.71
TUBB1-201ENST00000217133 INPP4AQ96PE3 977 aaPredicted RBP10.61□□□□□ -0.71
TUBB1-201ENST00000217133 AP1M1Q9BXS5 423 aa10.61□□□□□ -0.71
TUBB1-201ENST00000217133 OSBPL7Q9BZF2 842 aa10.61□□□□□ -0.71
TUBB1-201ENST00000217133 PDGFDQ9GZP0 370 aaPredicted RBP10.61□□□□□ -0.71
TUBB1-201ENST00000217133 CEP72Q9P209 647 aa10.61□□□□□ -0.71
TUBB1-201ENST00000217133 FBXL5Q9UKA1 691 aa10.61□□□□□ -0.71
TUBB1-201ENST00000217133 TPX2Q9ULW0 747 aaKnown RBP10.61□□□□□ -0.71
TUBB1-201ENST00000217133 DNM1LO00429 736 aa10.61□□□□□ -0.71
TUBB1-201ENST00000217133 TRAPPC3O43617 180 aa10.61□□□□□ -0.71
TUBB1-201ENST00000217133 ECM2O94769 699 aaPredicted RBP10.61□□□□□ -0.71
TUBB1-201ENST00000217133 RPSAP08865 295 aaKnown RBP10.61□□□□□ -0.71
TUBB1-201ENST00000217133 MAGOHP61326 146 aaKnown RBP10.61□□□□□ -0.71
TUBB1-201ENST00000217133 PPP1R7Q15435 360 aa10.61□□□□□ -0.71
TUBB1-201ENST00000217133 QPCTQ16769 361 aa10.61□□□□□ -0.71
TUBB1-201ENST00000217133 SOGA3Q5TF21 947 aa10.61□□□□□ -0.71
TUBB1-201ENST00000217133 MEI1Q5TIA1 1274 aa10.61□□□□□ -0.71
TUBB1-201ENST00000217133 SUSD4Q5VX71 490 aa10.61□□□□□ -0.71
TUBB1-201ENST00000217133 GALNT17Q6IS24 598 aa10.61□□□□□ -0.71
TUBB1-201ENST00000217133 GUF1Q8N442 669 aaKnown RBP10.61□□□□□ -0.71
TUBB1-201ENST00000217133 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.61□□□□□ -0.71
TUBB1-201ENST00000217133 MAGOHBQ96A72 148 aaKnown RBP10.61□□□□□ -0.71
TUBB1-201ENST00000217133 LEMD3Q9Y2U8 911 aa10.61□□□□□ -0.71
TUBB1-201ENST00000217133 ATP6V0A2Q9Y487 856 aa10.61□□□□□ -0.71
TUBB1-201ENST00000217133 BRWD3Q6RI45 1802 aa10.6□□□□□ -0.71
TUBB1-201ENST00000217133 PHF20L1A8MW92 1017 aa10.6□□□□□ -0.71
TUBB1-201ENST00000217133 RFC4P35249 363 aa10.6□□□□□ -0.71
TUBB1-201ENST00000217133 SCTRP47872 440 aa10.6□□□□□ -0.71
TUBB1-201ENST00000217133 ZNF844Q08AG5 666 aa10.6□□□□□ -0.71
TUBB1-201ENST00000217133 ASIC2Q16515 512 aa10.6□□□□□ -0.71
TUBB1-201ENST00000217133 ASTE1Q2TB18 679 aaPredicted RBP10.6□□□□□ -0.71
TUBB1-201ENST00000217133 HGSNATQ68CP4 663 aa10.6□□□□□ -0.71
TUBB1-201ENST00000217133 UNC13DQ70J99 1090 aa10.6□□□□□ -0.71
TUBB1-201ENST00000217133 ARMC9Q7Z3E5 817 aa10.6□□□□□ -0.71
TUBB1-201ENST00000217133 KRT25Q7Z3Z0 450 aa10.6□□□□□ -0.71
TUBB1-201ENST00000217133 C3orf20Q8ND61 904 aa10.6□□□□□ -0.71
TUBB1-201ENST00000217133 RAPGEF5Q92565 580 aa10.6□□□□□ -0.71
TUBB1-201ENST00000217133 HVCN1Q96D96 273 aa10.6□□□□□ -0.71
TUBB1-201ENST00000217133 MCM9Q9NXL9 1143 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms