RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 TAOK3Q9H2K8 898 aa8.86□□□□□ -0.99
HMGXB4-201ENST00000216106 NDST4Q9H3R1 872 aa8.86□□□□□ -0.99
HMGXB4-201ENST00000216106 CGNQ9P2M7 1197 aaKnown RBP8.86□□□□□ -0.99
HMGXB4-201ENST00000216106 VAV3Q9UKW4 847 aa8.86□□□□□ -0.99
HMGXB4-201ENST00000216106 IGLV3-22A0A075B6J6 115 aa8.86□□□□□ -0.99
HMGXB4-201ENST00000216106 RPA1P27694 616 aa8.86□□□□□ -0.99
HMGXB4-201ENST00000216106 ZNF569Q5MCW4 686 aa8.86□□□□□ -0.99
HMGXB4-201ENST00000216106 JDP2Q8WYK2 163 aa8.86□□□□□ -0.99
HMGXB4-201ENST00000216106 ZBED3Q96IU2 234 aaPredicted RBP8.86□□□□□ -0.99
HMGXB4-201ENST00000216106 ERGIC2Q96RQ1 377 aa8.86□□□□□ -0.99
HMGXB4-201ENST00000216106 FEZ1Q99689 392 aa8.86□□□□□ -0.99
HMGXB4-201ENST00000216106 ZNF341Q9BYN7 854 aa8.86□□□□□ -0.99
HMGXB4-201ENST00000216106 PGAP2Q9UHJ9 254 aa8.86□□□□□ -0.99
HMGXB4-201ENST00000216106 PCDHA2Q9Y5H9 948 aa8.86□□□□□ -0.99
HMGXB4-201ENST00000216106 MRFAP1Q9Y605 127 aa8.86□□□□□ -0.99
HMGXB4-201ENST00000216106 EPN1Q9Y6I3 576 aaPredicted RBP8.86□□□□□ -0.99
HMGXB4-201ENST00000216106 GCOM1H8Y6P7 765 aaPredicted RBP8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 EML1O00423 815 aa8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 CHMP2AO43633 222 aa8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 FGFR1OPO95684 399 aaKnown RBP8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 CYP3A4P08684 503 aa8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 POLR2MP0CAP2 368 aa8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 MAP3K9P80192 1104 aa8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 RASA3Q14644 834 aa8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 MAN2A1Q16706 1144 aa8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 ZCWPW2Q504Y3 356 aa8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 FBXO38Q6PIJ6 1188 aa8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 NUP58Q9BVL2 599 aa8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 CCDC94Q9BW85 323 aaPredicted RBP8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 SH2D4AQ9H788 454 aa8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 FAM207AQ9NSI2 230 aaPredicted RBP8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 RGL1Q9NZL6 768 aa8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 DNM3Q9UQ16 869 aa8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 REXO2Q9Y3B8 237 aaKnown RBP8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 BRCA1P38398 1863 aaKnown RBP8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 TRAF5O00463 557 aa8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 ASNSP08243 561 aa8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 DALRD3Q5D0E6 543 aaKnown RBP8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 TRIM10Q9UDY6 481 aa8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 EPHB6O15197 1021 aa8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 ARHGAP25P42331 645 aa8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 DGKZQ13574 1117 aa8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 KIF4BQ2VIQ3 1234 aa8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 SLC35F6Q8N357 371 aa8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 CCDC155Q8N6L0 562 aa8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 RETREG2Q8NC44 543 aa8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 SCFD1Q8WVM8 642 aa8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 EIF2AK1Q9BQI3 630 aaKnown RBP8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 REEP2Q9BRK0 252 aa8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 TANGO6Q9C0B7 1094 aa8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 BHMT2Q9H2M3 363 aa8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 POLD4Q9HCU8 107 aa8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 TFR2Q9UP52 801 aa8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 RBBP6Q7Z6E9 1792 aaKnown RBP8.85□□□□□ -0.99
HMGXB4-201ENST00000216106 SLC26A4O43511 780 aa8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 CASP5P51878 434 aa8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 ZBED6P86452 979 aa8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 FKBP3Q00688 224 aaKnown RBP8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 PPP2R3AQ06190 1150 aa8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 TRAF1Q13077 416 aa8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 MEA1Q16626 185 aa8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 LDHDQ86WU2 507 aa8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 GPIHBP1Q8IV16 184 aa8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 SYT2Q8N9I0 419 aaPredicted RBP8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 MMRN2Q9H8L6 949 aa8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 EMILIN3Q9NT22 766 aa8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 SIK3Q9Y2K2 1263 aa8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 MRPL11Q9Y3B7 192 aaKnown RBP8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 PITPNM2Q9BZ72 1349 aa8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 FRMD3A2A2Y4 597 aa8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 NFKBIEO00221 500 aa8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 TADA3O75528 432 aa8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 TGFB2P61812 414 aa8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 GIT2Q14161 759 aa8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 CCDC40Q4G0X9 1142 aa8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 LRCH2Q5VUJ6 765 aa8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 FAM160B2Q86V87 743 aa8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 ZNF397Q8NF99 534 aaPredicted RBP8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 UBXN4Q92575 508 aa8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 AGBL1Q96MI9 1066 aa8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 ZNHIT6Q9NWK9 470 aaKnown RBP8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 FEM1BQ9UK73 627 aa8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 COL4A3BPQ9Y5P4 624 aa8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 ABCB11O95342 1321 aa8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 SPDYE4A6NLX3 237 aa8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 RSPH10B2B2RC85 870 aa8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 RSPH10BP0C881 870 aa8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 INPP5BP32019 993 aa8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 CTTNQ14247 550 aaKnown RBP8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 PIGOQ8TEQ8 1089 aa8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 GUCA1BQ9UMX6 200 aa8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 ASTN2O75129 1339 aaPredicted RBP8.84□□□□□ -0.99
HMGXB4-201ENST00000216106 PHF20L1A8MW92 1017 aa8.83□□□□□ -1
HMGXB4-201ENST00000216106 HOXA7P31268 230 aaPredicted RBP8.83□□□□□ -1
HMGXB4-201ENST00000216106 HERVK_113P62684 666 aa8.83□□□□□ -1
HMGXB4-201ENST00000216106 FIGNQ5HY92 759 aa8.83□□□□□ -1
HMGXB4-201ENST00000216106 SFR1Q86XK3 245 aa8.83□□□□□ -1
HMGXB4-201ENST00000216106 SMCR8Q8TEV9 937 aaPredicted RBP8.83□□□□□ -1
HMGXB4-201ENST00000216106 RUSC1Q9BVN2 902 aa8.83□□□□□ -1
HMGXB4-201ENST00000216106 KCTD10Q9H3F6 313 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 697.7 ms