RNA–Protein interactions for RNA: ENST00000216083.6

CBX6-201, Transcript of chromobox 6, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CBX6, Length 3,191 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6-201ENST00000216083 TRIM9Q9C026 710 aa16.32■□□□□ 0.2
CBX6-201ENST00000216083 XPO4Q9C0E2 1151 aaKnown RBP16.32■□□□□ 0.2
CBX6-201ENST00000216083 CTNND2Q9UQB3 1225 aa16.32■□□□□ 0.2
CBX6-201ENST00000216083 COL11A1P12107 1806 aaPredicted RBP16.32■□□□□ 0.2
CBX6-201ENST00000216083 DSG3P32926 999 aa16.32■□□□□ 0.2
CBX6-201ENST00000216083 CIITAP33076 1130 aa16.32■□□□□ 0.2
CBX6-201ENST00000216083 ASIC1P78348 528 aa16.32■□□□□ 0.2
CBX6-201ENST00000216083 CATSPERGQ6ZRH7 1159 aa16.32■□□□□ 0.2
CBX6-201ENST00000216083 SYTL5Q8TDW5 730 aaPredicted RBP16.32■□□□□ 0.2
CBX6-201ENST00000216083 RNF146Q9NTX7 359 aa16.32■□□□□ 0.2
CBX6-201ENST00000216083 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.32■□□□□ 0.2
CBX6-201ENST00000216083 MYMKA6NI61 221 aa16.32■□□□□ 0.2
CBX6-201ENST00000216083 DDX39AO00148 427 aaKnown RBP16.32■□□□□ 0.2
CBX6-201ENST00000216083 EML1O00423 815 aa16.32■□□□□ 0.2
CBX6-201ENST00000216083 HSD17B4P51659 736 aa16.32■□□□□ 0.2
CBX6-201ENST00000216083 CCZ1BP86790 482 aa16.32■□□□□ 0.2
CBX6-201ENST00000216083 CCZ1P86791 482 aaPredicted RBP16.32■□□□□ 0.2
CBX6-201ENST00000216083 SKIDA1Q1XH10 827 aa16.32■□□□□ 0.2
CBX6-201ENST00000216083 NYAP1Q6ZVC0 841 aa16.32■□□□□ 0.2
CBX6-201ENST00000216083 LARP4BQ92615 738 aaKnown RBP16.32■□□□□ 0.2
CBX6-201ENST00000216083 EEF2KMTQ96G04 330 aa16.32■□□□□ 0.2
CBX6-201ENST00000216083 C12orf42Q96LP6 360 aa16.32■□□□□ 0.2
CBX6-201ENST00000216083 ZNF214Q9UL59 606 aaPredicted RBP16.32■□□□□ 0.2
CBX6-201ENST00000216083 RLFQ13129 1914 aa16.32■□□□□ 0.2
CBX6-201ENST00000216083 OTOFQ9HC10 1997 aa16.31■□□□□ 0.2
CBX6-201ENST00000216083 IKBKBO14920 756 aa16.31■□□□□ 0.2
CBX6-201ENST00000216083 IREB2P48200 963 aaKnown RBP16.31■□□□□ 0.2
CBX6-201ENST00000216083 CACNB1Q02641 598 aaPredicted RBP16.31■□□□□ 0.2
CBX6-201ENST00000216083 GOLGA8FQ08AF8 430 aa16.31■□□□□ 0.2
CBX6-201ENST00000216083 GOLGA8DPQ0D2H9 430 aa16.31■□□□□ 0.2
CBX6-201ENST00000216083 REPS2Q8NFH8 660 aa16.31■□□□□ 0.2
CBX6-201ENST00000216083 POLD4Q9HCU8 107 aa16.31■□□□□ 0.2
CBX6-201ENST00000216083 SPDYE16A6NNV3 312 aaPredicted RBP16.31■□□□□ 0.2
CBX6-201ENST00000216083 CYP3A4P08684 503 aa16.31■□□□□ 0.2
CBX6-201ENST00000216083 FCER1AP12319 257 aa16.31■□□□□ 0.2
CBX6-201ENST00000216083 PSMC6P62333 389 aa16.31■□□□□ 0.2
CBX6-201ENST00000216083 BAATQ14032 418 aaPredicted RBP16.31■□□□□ 0.2
CBX6-201ENST00000216083 CEP55Q53EZ4 464 aa16.31■□□□□ 0.2
CBX6-201ENST00000216083 MOXD1Q6UVY6 613 aa16.31■□□□□ 0.2
CBX6-201ENST00000216083 NAP1L4Q99733 375 aaKnown RBP16.31■□□□□ 0.2
CBX6-201ENST00000216083 RGL1Q9NZL6 768 aa16.31■□□□□ 0.2
CBX6-201ENST00000216083 ITGB5P18084 799 aa16.3■□□□□ 0.2
CBX6-201ENST00000216083 PRCPP42785 496 aa16.3■□□□□ 0.2
CBX6-201ENST00000216083 FANCCQ00597 558 aa16.3■□□□□ 0.2
CBX6-201ENST00000216083 SARM1Q6SZW1 724 aa16.3■□□□□ 0.2
CBX6-201ENST00000216083 SV2BQ7L1I2 683 aa16.3■□□□□ 0.2
CBX6-201ENST00000216083 SLFN12Q8IYM2 578 aa16.3■□□□□ 0.2
CBX6-201ENST00000216083 WDR11Q9BZH6 1224 aa16.3■□□□□ 0.2
CBX6-201ENST00000216083 PARP14Q460N5 1801 aa16.3■□□□□ 0.2
CBX6-201ENST00000216083 MYCLP12524 364 aaPredicted RBP16.3■□□□□ 0.2
CBX6-201ENST00000216083 MCTP2Q6DN12 878 aa16.3■□□□□ 0.2
CBX6-201ENST00000216083 RNF207Q6ZRF8 634 aa16.3■□□□□ 0.2
CBX6-201ENST00000216083 CATSPER3Q86XQ3 398 aa16.3■□□□□ 0.2
CBX6-201ENST00000216083 RAD54LQ92698 747 aa16.3■□□□□ 0.2
CBX6-201ENST00000216083 DNAI1Q9UI46 699 aa16.3■□□□□ 0.2
CBX6-201ENST00000216083 VAV3Q9UKW4 847 aa16.3■□□□□ 0.2
CBX6-201ENST00000216083 NPHP3-ACAD11A0A0J9YXS1 232 aa16.3■□□□□ 0.2
CBX6-201ENST00000216083 TRIM49BA6NDI0 452 aa16.3■□□□□ 0.2
CBX6-201ENST00000216083 GRIN3BO60391 1043 aa16.3■□□□□ 0.2
CBX6-201ENST00000216083 IDEP14735 1019 aa16.3■□□□□ 0.2
CBX6-201ENST00000216083 TMEM119Q4V9L6 283 aa16.3■□□□□ 0.2
CBX6-201ENST00000216083 SERPINC1P01008 464 aa16.29■□□□□ 0.2
CBX6-201ENST00000216083 NF2P35240 595 aa16.29■□□□□ 0.2
CBX6-201ENST00000216083 PDE4DQ08499 809 aa16.29■□□□□ 0.2
CBX6-201ENST00000216083 STK4Q13043 487 aa16.29■□□□□ 0.2
CBX6-201ENST00000216083 MKRN3Q13064 507 aaKnown RBP16.29■□□□□ 0.2
CBX6-201ENST00000216083 LRCH2Q5VUJ6 765 aa16.29■□□□□ 0.2
CBX6-201ENST00000216083 CREBRFQ8IUR6 639 aa16.29■□□□□ 0.2
CBX6-201ENST00000216083 R3HDMLQ9H3Y0 253 aa16.29■□□□□ 0.2
CBX6-201ENST00000216083 SYNRGQ9UMZ2 1314 aa16.29■□□□□ 0.2
CBX6-201ENST00000216083 TPM4P67936 248 aa16.29■□□□□ 0.2
CBX6-201ENST00000216083 MRPS9P82933 396 aaKnown RBP16.29■□□□□ 0.2
CBX6-201ENST00000216083 ZNF658Q5TYW1 1059 aaPredicted RBP16.29■□□□□ 0.2
CBX6-201ENST00000216083 DACH1Q9UI36 760 aa16.29■□□□□ 0.2
CBX6-201ENST00000216083 PMS1P54277 932 aaKnown RBP16.28■□□□□ 0.2
CBX6-201ENST00000216083 TMC6Q7Z403 805 aa16.28■□□□□ 0.2
CBX6-201ENST00000216083 MCF2L2Q86YR7 1114 aa16.28■□□□□ 0.2
CBX6-201ENST00000216083 ANKRD13AQ8IZ07 590 aa16.28■□□□□ 0.2
CBX6-201ENST00000216083 RMDN3Q96TC7 470 aa16.28■□□□□ 0.2
CBX6-201ENST00000216083 ZSWIM4Q9H7M6 989 aa16.28■□□□□ 0.2
CBX6-201ENST00000216083 SLC39A2Q9NP94 309 aa16.28■□□□□ 0.2
CBX6-201ENST00000216083 ZBTB39O15060 712 aa16.28■□□□□ 0.2
CBX6-201ENST00000216083 SPATA31C1P0DKV0 1188 aa16.28■□□□□ 0.2
CBX6-201ENST00000216083 CTTNQ14247 550 aaKnown RBP16.28■□□□□ 0.2
CBX6-201ENST00000216083 TMCO3Q6UWJ1 677 aa16.28■□□□□ 0.2
CBX6-201ENST00000216083 GLIS3Q8NEA6 775 aa16.28■□□□□ 0.2
CBX6-201ENST00000216083 ENOX1Q8TC92 643 aaKnown RBP16.28■□□□□ 0.2
CBX6-201ENST00000216083 ZNF526Q8TF50 670 aaPredicted RBP16.28■□□□□ 0.2
CBX6-201ENST00000216083 ZC3H15Q8WU90 426 aaKnown RBP16.28■□□□□ 0.2
CBX6-201ENST00000216083 DDX12PQ92771 950 aa16.28■□□□□ 0.2
CBX6-201ENST00000216083 ZNF577Q9BSK1 485 aa16.28■□□□□ 0.2
CBX6-201ENST00000216083 CUEDC2Q9H467 287 aa16.28■□□□□ 0.2
CBX6-201ENST00000216083 URI1O94763 535 aaPredicted RBP16.28■□□□□ 0.2
CBX6-201ENST00000216083 PABPC4Q13310 644 aaKnown RBP eCLIP16.28■□□□□ 0.2
CBX6-201ENST00000216083 NELFBQ8WX92 580 aa16.28■□□□□ 0.2
CBX6-201ENST00000216083 OPTNQ96CV9 577 aa16.28■□□□□ 0.2
CBX6-201ENST00000216083 FAM20AQ96MK3 541 aa16.28■□□□□ 0.2
CBX6-201ENST00000216083 C7orf25Q9BPX7 421 aa16.28■□□□□ 0.2
CBX6-201ENST00000216083 PTPRFP10586 1907 aa16.27■□□□□ 0.2
CBX6-201ENST00000216083 OAS2P29728 719 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms