RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 ATXN8OSP0DMR3 200 aa18.53■□□□□ 0.56
ITGB4-201ENST00000200181 CC2D2AQ9P2K1 1620 aa18.53■□□□□ 0.56
ITGB4-201ENST00000200181 GFPT2O94808 682 aa18.53■□□□□ 0.56
ITGB4-201ENST00000200181 PDIA3P30101 505 aaKnown RBP18.53■□□□□ 0.56
ITGB4-201ENST00000200181 SCRN1Q12765 414 aa18.53■□□□□ 0.56
ITGB4-201ENST00000200181 METTL23Q86XA0 190 aa18.53■□□□□ 0.56
ITGB4-201ENST00000200181 HIPK4Q8NE63 616 aa18.53■□□□□ 0.56
ITGB4-201ENST00000200181 GINM1Q9NU53 330 aa18.53■□□□□ 0.56
ITGB4-201ENST00000200181 ZMYM4Q5VZL5 1548 aa18.52■□□□□ 0.56
ITGB4-201ENST00000200181 FOSP01100 380 aaPredicted RBP18.52■□□□□ 0.56
ITGB4-201ENST00000200181 CA4P22748 312 aa18.52■□□□□ 0.56
ITGB4-201ENST00000200181 ICA1Q05084 483 aa18.52■□□□□ 0.56
ITGB4-201ENST00000200181 PABPC4Q13310 644 aaKnown RBP eCLIP18.52■□□□□ 0.56
ITGB4-201ENST00000200181 TNFAIP1Q13829 316 aa18.52■□□□□ 0.56
ITGB4-201ENST00000200181 BBS9Q3SYG4 887 aa18.52■□□□□ 0.56
ITGB4-201ENST00000200181 ZNF658Q5TYW1 1059 aaPredicted RBP18.52■□□□□ 0.56
ITGB4-201ENST00000200181 CRLF3Q8IUI8 442 aa18.52■□□□□ 0.56
ITGB4-201ENST00000200181 NCLNQ969V3 563 aa18.52■□□□□ 0.56
ITGB4-201ENST00000200181 NHEJ1Q9H9Q4 299 aaPredicted RBP18.52■□□□□ 0.56
ITGB4-201ENST00000200181 IRAK4Q9NWZ3 460 aa18.52■□□□□ 0.56
ITGB4-201ENST00000200181 FNDC3AQ9Y2H6 1198 aaKnown RBP18.52■□□□□ 0.56
ITGB4-201ENST00000200181 GTPBP10A4D1E9 387 aaKnown RBP18.52■□□□□ 0.56
ITGB4-201ENST00000200181 SOWAHDA6NJG2 315 aa18.52■□□□□ 0.56
ITGB4-201ENST00000200181 ZNF233A6NK53 670 aa18.52■□□□□ 0.56
ITGB4-201ENST00000200181 ARHGEF9O43307 516 aa18.52■□□□□ 0.56
ITGB4-201ENST00000200181 HSPA4LO95757 839 aa18.52■□□□□ 0.56
ITGB4-201ENST00000200181 ANGPTL8Q6UXH0 198 aa18.52■□□□□ 0.56
ITGB4-201ENST00000200181 NCAPG2Q86XI2 1143 aa18.52■□□□□ 0.56
ITGB4-201ENST00000200181 DYDC2Q96IM9 177 aa18.52■□□□□ 0.56
ITGB4-201ENST00000200181 CARD14Q9BXL6 1004 aa18.52■□□□□ 0.56
ITGB4-201ENST00000200181 WARS2Q9UGM6 360 aaKnown RBP18.52■□□□□ 0.56
ITGB4-201ENST00000200181 ABCC12Q96J65 1359 aa18.52■□□□□ 0.56
ITGB4-201ENST00000200181 DNMBPQ6XZF7 1577 aa18.52■□□□□ 0.56
ITGB4-201ENST00000200181 LLGL1Q15334 1064 aa18.52■□□□□ 0.56
ITGB4-201ENST00000200181 LGR6Q9HBX8 967 aa18.52■□□□□ 0.56
ITGB4-201ENST00000200181 PALD1Q9ULE6 856 aa18.52■□□□□ 0.56
ITGB4-201ENST00000200181 SYCE1LA8MT33 242 aa18.52■□□□□ 0.55
ITGB4-201ENST00000200181 PYGLP06737 847 aa18.52■□□□□ 0.55
ITGB4-201ENST00000200181 GSPT1P15170 499 aaKnown RBP18.52■□□□□ 0.55
ITGB4-201ENST00000200181 ALDH1B1P30837 517 aa18.52■□□□□ 0.55
ITGB4-201ENST00000200181 ATP6V0A1Q93050 837 aa18.52■□□□□ 0.55
ITGB4-201ENST00000200181 CLCN6P51797 869 aa18.51■□□□□ 0.55
ITGB4-201ENST00000200181 CASP8Q14790 479 aa18.51■□□□□ 0.55
ITGB4-201ENST00000200181 CENPUQ71F23 418 aa18.51■□□□□ 0.55
ITGB4-201ENST00000200181 ZBTB18Q99592 522 aa18.51■□□□□ 0.55
ITGB4-201ENST00000200181 NEURL1BA8MQ27 555 aa18.51■□□□□ 0.55
ITGB4-201ENST00000200181 PPIP5K2O43314 1243 aa18.51■□□□□ 0.55
ITGB4-201ENST00000200181 PKP1Q13835 747 aa18.51■□□□□ 0.55
ITGB4-201ENST00000200181 LRRC41Q15345 812 aa18.51■□□□□ 0.55
ITGB4-201ENST00000200181 NUGGCQ68CJ6 796 aa18.51■□□□□ 0.55
ITGB4-201ENST00000200181 RNF207Q6ZRF8 634 aa18.51■□□□□ 0.55
ITGB4-201ENST00000200181 SMYD4Q8IYR2 804 aaPredicted RBP18.51■□□□□ 0.55
ITGB4-201ENST00000200181 TMEM232C9JQI7 657 aa18.51■□□□□ 0.55
ITGB4-201ENST00000200181 IL13P35225 146 aa18.51■□□□□ 0.55
ITGB4-201ENST00000200181 SLC39A14Q15043 492 aa18.51■□□□□ 0.55
ITGB4-201ENST00000200181 SLFN13Q68D06 897 aa18.51■□□□□ 0.55
ITGB4-201ENST00000200181 PCDHA13Q9Y5I0 950 aa18.51■□□□□ 0.55
ITGB4-201ENST00000200181 GADL1Q6ZQY3 521 aa18.51■□□□□ 0.55
ITGB4-201ENST00000200181 PRPF38AQ8NAV1 312 aaKnown RBP18.51■□□□□ 0.55
ITGB4-201ENST00000200181 PYROXD1Q8WU10 500 aa18.51■□□□□ 0.55
ITGB4-201ENST00000200181 YIPF3Q9GZM5 350 aa18.51■□□□□ 0.55
ITGB4-201ENST00000200181 KMT5AQ9NQR1 393 aa18.51■□□□□ 0.55
ITGB4-201ENST00000200181 GCNT4Q9P109 453 aa18.51■□□□□ 0.55
ITGB4-201ENST00000200181 IPO5O00410 1097 aaKnown RBP18.51■□□□□ 0.55
ITGB4-201ENST00000200181 PRPSAP2O60256 369 aa18.51■□□□□ 0.55
ITGB4-201ENST00000200181 SLC7A5Q01650 507 aa18.51■□□□□ 0.55
ITGB4-201ENST00000200181 C11orf57Q6ZUT1 292 aaPredicted RBP18.51■□□□□ 0.55
ITGB4-201ENST00000200181 AK8Q96MA6 479 aa18.51■□□□□ 0.55
ITGB4-201ENST00000200181 FOXP1Q9H334 677 aaPredicted RBP18.51■□□□□ 0.55
ITGB4-201ENST00000200181 PCDHA4Q9UN74 947 aa18.51■□□□□ 0.55
ITGB4-201ENST00000200181 SERPING1P05155 500 aa18.5■□□□□ 0.55
ITGB4-201ENST00000200181 TAC1P20366 129 aa18.5■□□□□ 0.55
ITGB4-201ENST00000200181 MDM2Q00987 491 aaPredicted RBP18.5■□□□□ 0.55
ITGB4-201ENST00000200181 UBE2TQ9NPD8 197 aaPredicted RBP18.5■□□□□ 0.55
ITGB4-201ENST00000200181 EIF4A3P38919 411 aaKnown RBP18.5■□□□□ 0.55
ITGB4-201ENST00000200181 SEPT2Q15019 361 aa18.5■□□□□ 0.55
ITGB4-201ENST00000200181 DPCR1Q3MIW9 517 aa18.5■□□□□ 0.55
ITGB4-201ENST00000200181 DDX17Q92841 729 aaKnown RBP18.5■□□□□ 0.55
ITGB4-201ENST00000200181 TTC25Q96NG3 672 aa18.5■□□□□ 0.55
ITGB4-201ENST00000200181 ELAC2Q9BQ52 826 aaKnown RBP18.5■□□□□ 0.55
ITGB4-201ENST00000200181 PCDHA1Q9Y5I3 950 aa18.5■□□□□ 0.55
ITGB4-201ENST00000200181 HNRNPH2P55795 449 aaKnown RBP18.5■□□□□ 0.55
ITGB4-201ENST00000200181 CUL1Q13616 776 aa18.5■□□□□ 0.55
ITGB4-201ENST00000200181 EXT2Q93063 718 aa18.5■□□□□ 0.55
ITGB4-201ENST00000200181 AP1M1Q9BXS5 423 aa18.5■□□□□ 0.55
ITGB4-201ENST00000200181 SUN2Q9UH99 717 aa18.5■□□□□ 0.55
ITGB4-201ENST00000200181 MAN1B1Q9UKM7 699 aa18.5■□□□□ 0.55
ITGB4-201ENST00000200181 TRAPPC10P48553 1259 aa18.5■□□□□ 0.55
ITGB4-201ENST00000200181 PI4K2BQ8TCG2 481 aa18.5■□□□□ 0.55
ITGB4-201ENST00000200181 CACTINQ8WUQ7 758 aaKnown RBP18.5■□□□□ 0.55
ITGB4-201ENST00000200181 DHX38Q92620 1227 aaKnown RBP18.5■□□□□ 0.55
ITGB4-201ENST00000200181 CLIC2O15247 247 aa18.5■□□□□ 0.55
ITGB4-201ENST00000200181 E2F6O75461 281 aa18.5■□□□□ 0.55
ITGB4-201ENST00000200181 ENOX1Q8TC92 643 aaKnown RBP18.5■□□□□ 0.55
ITGB4-201ENST00000200181 ZNF577Q9BSK1 485 aa18.5■□□□□ 0.55
ITGB4-201ENST00000200181 BEGAINQ9BUH8 593 aa18.5■□□□□ 0.55
ITGB4-201ENST00000200181 PITPNM3Q9BZ71 974 aa18.5■□□□□ 0.55
ITGB4-201ENST00000200181 TRPV6Q9H1D0 765 aa18.5■□□□□ 0.55
ITGB4-201ENST00000200181 TMEM60Q9H2L4 133 aa18.5■□□□□ 0.55
ITGB4-201ENST00000200181 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms