RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 SYTL3Q4VX76 610 aa3.71□□□□□ -1.81
NEB-201ENST00000172853 AKAP4Q5JQC9 854 aa3.71□□□□□ -1.81
NEB-201ENST00000172853 TTC13Q8NBP0 860 aa3.71□□□□□ -1.81
NEB-201ENST00000172853 PTPRKQ15262 1439 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 SERPINB2P05120 415 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 HPCAP84074 193 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 LBRQ14739 615 aaKnown RBP3.71□□□□□ -1.82
NEB-201ENST00000172853 TRIM67Q6ZTA4 783 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 RUNDC3BQ96NL0 473 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 IDI2Q9BXS1 227 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 RNF40O75150 1001 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 NFX1Q12986 1120 aaKnown RBP3.71□□□□□ -1.82
NEB-201ENST00000172853 ISM2Q6H9L7 571 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 KLHL24Q6TFL4 600 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 ZSCAN30Q86W11 494 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 MCCC1Q96RQ3 725 aaPredicted RBP3.71□□□□□ -1.82
NEB-201ENST00000172853 OSBPL6Q9BZF3 934 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 DNAJC11Q9NVH1 559 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 PYGMP11217 842 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 HADHAP40939 763 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 MECOMQ03112 1051 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 ITGADQ13349 1161 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 FAM98CQ17RN3 349 aaKnown RBP3.71□□□□□ -1.82
NEB-201ENST00000172853 POTEDQ86YR6 584 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 AFG1LQ8WV93 481 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 TRIM10Q9UDY6 481 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 PCDHGA4Q9Y5G9 962 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 GOLGA8IPA6NC78 632 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 HIST1H2AGP0C0S8 130 aaPredicted RBP3.71□□□□□ -1.82
NEB-201ENST00000172853 HIST1H2ADP20671 130 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 MAP4P27816 1152 aaKnown RBP3.71□□□□□ -1.82
NEB-201ENST00000172853 SESN3P58005 492 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 IDI1Q13907 227 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 SLFN12LQ6IEE8 588 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 SNX29Q8TEQ0 813 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 HIST1H2AHQ96KK5 128 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 HIST1H2AJQ99878 128 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 H2AFJQ9BTM1 129 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 CCDC177Q9NQR7 707 aaPredicted RBP3.71□□□□□ -1.82
NEB-201ENST00000172853 MPP6Q9NZW5 540 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 AK9Q5TCS8 1911 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 OPLAHO14841 1288 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 SPTLC2O15270 562 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 IMPDH2P12268 514 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 TXKP42681 527 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 TCEAL5Q5H9L2 206 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 TOGARAM2Q6ZUX3 1019 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 CRELD1Q96HD1 420 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 GAS2L1Q99501 681 aaPredicted RBP3.71□□□□□ -1.82
NEB-201ENST00000172853 TRIT1Q9H3H1 467 aaKnown RBP3.71□□□□□ -1.82
NEB-201ENST00000172853 EPB41L3Q9Y2J2 1087 aaPredicted RBP3.71□□□□□ -1.82
NEB-201ENST00000172853 VCLP18206 1134 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 TRPC1P48995 793 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 ZMYND11Q15326 602 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 OTULINQ96BN8 352 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 PDX1P52945 283 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 CYP4A11Q02928 519 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 USP39Q53GS9 565 aaKnown RBP3.71□□□□□ -1.82
NEB-201ENST00000172853 NLNQ9BYT8 704 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 FANCFQ9NPI8 374 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 LARSQ9P2J5 1176 aaKnown RBP3.71□□□□□ -1.82
NEB-201ENST00000172853 TSKSQ9UJT2 592 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 AMFRQ9UKV5 643 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 SNX6Q9UNH7 406 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 INPP5FQ9Y2H2 1132 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 ZSCAN9O15535 394 aaPredicted RBP3.71□□□□□ -1.82
NEB-201ENST00000172853 MTRF1O75570 445 aaKnown RBP3.71□□□□□ -1.82
NEB-201ENST00000172853 MYL7Q01449 175 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 UVSSAQ2YD98 709 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 ALDH1L2Q3SY69 923 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 MRPL48Q96GC5 212 aaKnown RBP3.71□□□□□ -1.82
NEB-201ENST00000172853 KATNAL1Q9BW62 490 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 ARFGAP3Q9NP61 516 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 CCDC141Q6ZP82 1450 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 THOC2Q8NI27 1593 aaKnown RBP3.71□□□□□ -1.82
NEB-201ENST00000172853 DENND4BO75064 1496 aaPredicted RBP3.71□□□□□ -1.82
NEB-201ENST00000172853 SNUPNO95149 360 aaKnown RBP3.71□□□□□ -1.82
NEB-201ENST00000172853 PTK2Q05397 1052 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 MKRN3Q13064 507 aaKnown RBP3.71□□□□□ -1.82
NEB-201ENST00000172853 MTMR3Q13615 1198 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 B4GALNT4Q76KP1 1039 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 ZNF513Q8N8E2 541 aaPredicted RBP3.71□□□□□ -1.82
NEB-201ENST00000172853 STKLD1Q8NE28 680 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 VMP1Q96GC9 406 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 TTF2Q9UNY4 1162 aaKnown RBP3.71□□□□□ -1.82
NEB-201ENST00000172853 PLCH2O75038 1416 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 VSTM5A8MXK1 200 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 DDAH1O94760 285 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 LRG1P02750 347 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 RALBP11234 206 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 BCAMP50895 628 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 GTF2IP78347 998 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 PPP2R3AQ06190 1150 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 SPON1Q9HCB6 807 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 TRPC7Q9HCX4 862 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 LZTFL1Q9NQ48 299 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 PIM2Q9P1W9 311 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 PLB1Q6P1J6 1458 aa3.71□□□□□ -1.82
NEB-201ENST00000172853 HNRNPH1P31943 449 aaKnown RBP3.71□□□□□ -1.82
NEB-201ENST00000172853 SV2CQ496J9 727 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms