RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 SSU72P8A0A1W2PR75 194 aa15.45■□□□□ 0.06
USH1C-201ENST00000005226 GRID2IPA4D2P6 1211 aa15.45■□□□□ 0.06
USH1C-201ENST00000005226 SLURP2P0DP57 97 aa15.45■□□□□ 0.06
USH1C-201ENST00000005226 LSP1P33241 339 aa15.45■□□□□ 0.06
USH1C-201ENST00000005226 RNF10Q8N5U6 811 aaKnown RBP15.45■□□□□ 0.06
USH1C-201ENST00000005226 NEDD1Q8NHV4 660 aa15.45■□□□□ 0.06
USH1C-201ENST00000005226 ATP6V0A2Q9Y487 856 aa15.45■□□□□ 0.06
USH1C-201ENST00000005226 COL22A1Q8NFW1 1626 aaPredicted RBP15.44■□□□□ 0.06
USH1C-201ENST00000005226 KCNK3O14649 394 aa15.44■□□□□ 0.06
USH1C-201ENST00000005226 HNRNPH1P31943 449 aaKnown RBP15.44■□□□□ 0.06
USH1C-201ENST00000005226 SLC16A2P36021 539 aa15.44■□□□□ 0.06
USH1C-201ENST00000005226 FXR2P51116 673 aaKnown RBP eCLIP15.44■□□□□ 0.06
USH1C-201ENST00000005226 ADCY7P51828 1080 aa15.44■□□□□ 0.06
USH1C-201ENST00000005226 FKBP3Q00688 224 aaKnown RBP15.44■□□□□ 0.06
USH1C-201ENST00000005226 KLHL30Q0D2K2 578 aa15.44■□□□□ 0.06
USH1C-201ENST00000005226 PAK2Q13177 524 aa15.44■□□□□ 0.06
USH1C-201ENST00000005226 HLTFQ14527 1009 aaKnown RBP eCLIP15.44■□□□□ 0.06
USH1C-201ENST00000005226 CEP85LQ5SZL2 805 aa15.44■□□□□ 0.06
USH1C-201ENST00000005226 MEI1Q5TIA1 1274 aa15.44■□□□□ 0.06
USH1C-201ENST00000005226 TTBK2Q6IQ55 1244 aa15.44■□□□□ 0.06
USH1C-201ENST00000005226 KCNV1Q6PIU1 500 aa15.44■□□□□ 0.06
USH1C-201ENST00000005226 CEP72Q9P209 647 aa15.44■□□□□ 0.06
USH1C-201ENST00000005226 PLAAQ9Y263 795 aa15.44■□□□□ 0.06
USH1C-201ENST00000005226 IRS2Q9Y4H2 1338 aa15.44■□□□□ 0.06
USH1C-201ENST00000005226 BACH1O14867 736 aa15.44■□□□□ 0.06
USH1C-201ENST00000005226 ZCWPW2Q504Y3 356 aa15.44■□□□□ 0.06
USH1C-201ENST00000005226 FAM26FQ5R3K3 315 aa15.44■□□□□ 0.06
USH1C-201ENST00000005226 MMS22LQ6ZRQ5 1243 aa15.44■□□□□ 0.06
USH1C-201ENST00000005226 HAS1Q92839 578 aa15.44■□□□□ 0.06
USH1C-201ENST00000005226 IQCDQ96DY2 449 aa15.44■□□□□ 0.06
USH1C-201ENST00000005226 INPP4AQ96PE3 977 aaPredicted RBP15.44■□□□□ 0.06
USH1C-201ENST00000005226 RTFDC1Q9BY42 306 aaPredicted RBP15.44■□□□□ 0.06
USH1C-201ENST00000005226 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.44■□□□□ 0.06
USH1C-201ENST00000005226 NR1D1P20393 614 aa15.43■□□□□ 0.06
USH1C-201ENST00000005226 WDR66Q8TBY9 1149 aa15.43■□□□□ 0.06
USH1C-201ENST00000005226 SNED1Q8TER0 1413 aa15.43■□□□□ 0.06
USH1C-201ENST00000005226 KIAA1024Q9UPX6 916 aa15.43■□□□□ 0.06
USH1C-201ENST00000005226 RREB1Q92766 1687 aa15.43■□□□□ 0.06
USH1C-201ENST00000005226 PDHBP11177 359 aa15.43■□□□□ 0.06
USH1C-201ENST00000005226 SLC9A1P19634 815 aa15.43■□□□□ 0.06
USH1C-201ENST00000005226 GUCY2CP25092 1073 aa15.43■□□□□ 0.06
USH1C-201ENST00000005226 ERVK-9P63128 1117 aa15.43■□□□□ 0.06
USH1C-201ENST00000005226 CDC37Q16543 378 aaPredicted RBP15.43■□□□□ 0.06
USH1C-201ENST00000005226 SLC18A3Q16572 532 aa15.43■□□□□ 0.06
USH1C-201ENST00000005226 GLE1Q53GS7 698 aaKnown RBP15.43■□□□□ 0.06
USH1C-201ENST00000005226 HERC4Q5GLZ8 1057 aaPredicted RBP15.43■□□□□ 0.06
USH1C-201ENST00000005226 C16orf86Q6ZW13 317 aa15.43■□□□□ 0.06
USH1C-201ENST00000005226 BCAS3Q9H6U6 928 aa15.43■□□□□ 0.06
USH1C-201ENST00000005226 PPANQ9NQ55 473 aaKnown RBP15.43■□□□□ 0.06
USH1C-201ENST00000005226 ROBO3Q96MS0 1386 aa15.42■□□□□ 0.06
USH1C-201ENST00000005226 RBAK-RBAKDNI3L0D1 243 aa15.42■□□□□ 0.06
USH1C-201ENST00000005226 CEP104O60308 925 aa15.42■□□□□ 0.06
USH1C-201ENST00000005226 PPP1R11O60927 126 aaPredicted RBP15.42■□□□□ 0.06
USH1C-201ENST00000005226 TNFRSF8P28908 595 aa15.42■□□□□ 0.06
USH1C-201ENST00000005226 STAT3P40763 770 aa15.42■□□□□ 0.06
USH1C-201ENST00000005226 HDLBPQ00341 1268 aaKnown RBP15.42■□□□□ 0.06
USH1C-201ENST00000005226 TMEM119Q4V9L6 283 aa15.42■□□□□ 0.06
USH1C-201ENST00000005226 RNF187Q5TA31 235 aaPredicted RBP15.42■□□□□ 0.06
USH1C-201ENST00000005226 NAA35Q5VZE5 725 aa15.42■□□□□ 0.06
USH1C-201ENST00000005226 RIC8AQ9NPQ8 531 aa15.42■□□□□ 0.06
USH1C-201ENST00000005226 BCCIPQ9P287 314 aaKnown RBP eCLIP15.42■□□□□ 0.06
USH1C-201ENST00000005226 PPP4CP60510 307 aa15.42■□□□□ 0.06
USH1C-201ENST00000005226 PTK2Q05397 1052 aa15.42■□□□□ 0.06
USH1C-201ENST00000005226 PICALMQ13492 652 aa15.42■□□□□ 0.06
USH1C-201ENST00000005226 OTUD6BQ8N6M0 293 aa15.42■□□□□ 0.06
USH1C-201ENST00000005226 USP38Q8NB14 1042 aa15.42■□□□□ 0.06
USH1C-201ENST00000005226 NEUROG2Q9H2A3 272 aa15.42■□□□□ 0.06
USH1C-201ENST00000005226 DDX25Q9UHL0 483 aaKnown RBP15.42■□□□□ 0.06
USH1C-201ENST00000005226 LAMB2P55268 1798 aa15.42■□□□□ 0.06
USH1C-201ENST00000005226 SPATA31A1Q5TZJ5 1347 aa15.42■□□□□ 0.06
USH1C-201ENST00000005226 POTEB3A0JP26 581 aa15.41■□□□□ 0.06
USH1C-201ENST00000005226 POTECB2RU33 542 aa15.41■□□□□ 0.06
USH1C-201ENST00000005226 FLT3P36888 993 aa15.41■□□□□ 0.06
USH1C-201ENST00000005226 ADAM9Q13443 819 aa15.41■□□□□ 0.06
USH1C-201ENST00000005226 ASIC2Q16515 512 aa15.41■□□□□ 0.06
USH1C-201ENST00000005226 POTEBQ6S5H4 581 aa15.41■□□□□ 0.06
USH1C-201ENST00000005226 KDM7AQ6ZMT4 941 aa15.41■□□□□ 0.06
USH1C-201ENST00000005226 ZNF473Q8WTR7 871 aaKnown RBP15.41■□□□□ 0.06
USH1C-201ENST00000005226 RUBCNQ92622 972 aa15.41■□□□□ 0.06
USH1C-201ENST00000005226 RIOX1Q9H6W3 641 aa15.41■□□□□ 0.06
USH1C-201ENST00000005226 CASP5P51878 434 aa15.41■□□□□ 0.06
USH1C-201ENST00000005226 PDIA5Q14554 519 aa15.41■□□□□ 0.06
USH1C-201ENST00000005226 PTGISQ16647 500 aa15.41■□□□□ 0.06
USH1C-201ENST00000005226 TPTE2Q6XPS3 522 aa15.41■□□□□ 0.06
USH1C-201ENST00000005226 ZNF571Q7Z3V5 609 aaPredicted RBP15.41■□□□□ 0.06
USH1C-201ENST00000005226 TRIM59Q8IWR1 403 aa15.41■□□□□ 0.06
USH1C-201ENST00000005226 SCFD1Q8WVM8 642 aa15.41■□□□□ 0.06
USH1C-201ENST00000005226 ATP6V1G3Q96LB4 118 aa15.41■□□□□ 0.06
USH1C-201ENST00000005226 CCT8L2Q96SF2 557 aa15.41■□□□□ 0.06
USH1C-201ENST00000005226 LRRC4CQ9HCJ2 640 aa15.41■□□□□ 0.06
USH1C-201ENST00000005226 E7EVH7 732 aa15.4■□□□□ 0.06
USH1C-201ENST00000005226 RAD21O60216 631 aa15.4■□□□□ 0.06
USH1C-201ENST00000005226 ITGA4P13612 1032 aa15.4■□□□□ 0.06
USH1C-201ENST00000005226 MNAT1P51948 309 aa15.4■□□□□ 0.06
USH1C-201ENST00000005226 GSTO1P78417 241 aa15.4■□□□□ 0.06
USH1C-201ENST00000005226 PDE4CQ08493 712 aa15.4■□□□□ 0.06
USH1C-201ENST00000005226 KCNH2Q12809 1159 aa15.4■□□□□ 0.06
USH1C-201ENST00000005226 RPS6KA1Q15418 735 aa15.4■□□□□ 0.06
USH1C-201ENST00000005226 GPBP1Q86WP2 473 aa15.4■□□□□ 0.06
USH1C-201ENST00000005226 RAB34Q9BZG1 259 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 787.7 ms