RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Amer1Q7TS75 1132 aa28.58■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Cracr2bQ80ZJ8 394 aa28.58■■■□□ 2.17
Tpm1-216ENSMUST00000113707 D130040H23RikQ8BII3 405 aa28.58■■■□□ 2.17
Tpm1-216ENSMUST00000113707 Brca1P48754 1812 aa28.58■■■□□ 2.17
Tpm1-216ENSMUST00000113707 JcadQ5DTX6 1320 aa28.58■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Gm4758L7N258 96 aa28.57■■■□□ 2.16
Tpm1-216ENSMUST00000113707 AurkbO70126 345 aa28.57■■■□□ 2.16
Tpm1-216ENSMUST00000113707 MycnP03966 462 aaKnown RBP28.57■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Tal1P22091 329 aa28.57■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Ovgp1Q62010 721 aa28.57■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Tfe3Q64092 572 aaKnown RBP28.57■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Serpinb13Q8CDC0 389 aa28.57■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Hoxc10P31257 342 aa28.57■■■□□ 2.16
Tpm1-216ENSMUST00000113707 March6Q6ZQ89 909 aa28.57■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Cep95Q8BVV7 827 aa28.57■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Fsip1Q9D3V5 435 aa28.57■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Klhl10Q9D5V2 608 aa28.57■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Cabp5Q9JLK3 173 aa28.57■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Uso1Q9Z1Z0 959 aaKnown RBP28.57■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Knop1Q9Z2Q2 478 aaKnown RBP28.57■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Gm5580A0A0N4SVP8 411 aa28.56■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Ccdc121E9Q6D3 323 aa28.56■■■□□ 2.16
Tpm1-216ENSMUST00000113707 AgtP11859 477 aa28.56■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Znf618Q80YY7 953 aaKnown RBP28.56■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Cyp4f39Q8BGU0 532 aa28.56■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Trim47Q8C0E3 641 aa28.56■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Nek9Q8K1R7 984 aa28.56■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Vstm4T1NXB5 319 aa28.56■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Fam205aA2APU8 1308 aa28.56■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Spocd1B1ASB6 936 aa28.55■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Slc12a8Q8VI23 705 aa28.55■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Rfc4Q99J62 364 aa28.55■■■□□ 2.16
Tpm1-216ENSMUST00000113707 CutaQ9CQ89 177 aa28.55■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Mrvi1Q9WUX5 899 aaKnown RBP28.55■■■□□ 2.16
Tpm1-216ENSMUST00000113707 PfasQ5SUR0 1337 aa28.55■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Arl14Q3SXC5 192 aa28.55■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Bag1Q60739 355 aa28.55■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Senp5Q6NXL6 749 aa28.55■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Csgalnact2Q8C1F4 542 aa28.55■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Gtf2a1Q99PM3 378 aa28.55■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Zfand4D3Z3C6 739 aa28.54■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Ccdc191J3QQ27 883 aa28.54■■■□□ 2.16
Tpm1-216ENSMUST00000113707 PicalmQ7M6Y3 660 aaKnown RBP28.54■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Supt20hQ7TT00 530 aaKnown RBP28.54■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Armcx3Q8BHS6 379 aa28.54■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Cc2d1bQ8BRN9 848 aa28.54■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Klhl40Q9D783 621 aa28.54■■■□□ 2.16
Tpm1-216ENSMUST00000113707 PpihQ9D868 188 aa28.54■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Tbx18Q9EPZ6 613 aa28.54■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Sorbs3Q9R1Z8 733 aa28.54■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Fzd9Q9R216 592 aa28.54■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Etnk2A7MCT6 385 aa28.53■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Gm10436L7N1Y3 520 aa28.53■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Dhx15O35286 795 aaKnown RBP28.53■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Prl2c3P04768 224 aa28.53■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Pik3r1P26450 724 aa28.53■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Frat1P70339 274 aa28.53■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Tmem35bQ3U0Y2 150 aa28.53■■■□□ 2.16
Tpm1-216ENSMUST00000113707 P4ha1Q60715 534 aa28.53■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Tll1Q62381 1013 aa28.53■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Cyp26b1Q811W2 512 aa28.53■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Spdl1Q923A2 608 aa28.53■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Kif17Q99PW8 1038 aa28.53■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Lrp2bpQ9D4C6 346 aa28.53■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Cmtr1Q9DBC3 837 aa28.53■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Dnm2P39054 870 aaKnown RBP28.53■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Irf5P56477 497 aa28.53■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Pdrg1P59048 133 aa28.53■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Znf697Q569E7 569 aa28.53■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Fam20aQ8CID3 541 aa28.53■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Apopt1Q9CQW7 192 aa28.53■■■□□ 2.16
Tpm1-216ENSMUST00000113707 March8Q9DBD2 286 aa28.53■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Pgap3A2A559 320 aa28.52■■■□□ 2.16
Tpm1-216ENSMUST00000113707 NpcdF8VQB8 469 aa28.52■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Vmn2r78K7N6U5 853 aa28.52■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Zfp781Q0P5U5 243 aa28.52■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Fam83hQ148V8 1209 aa28.52■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Gse1Q3U3C9 1213 aa28.52■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Gpd2Q64521 727 aa28.52■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Znf280dQ68FE8 974 aa28.52■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Tpm4Q6IRU2 248 aa28.52■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Raver2Q7TPD6 673 aa28.52■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Tbc1d22bQ80VE5 505 aa28.52■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Ireb2Q811J3 963 aaKnown RBP28.52■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Spata32Q8C5V0 334 aa28.52■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Ddx27Q921N6 760 aaKnown RBP28.52■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Pstpip2Q99M15 334 aa28.52■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Bco2Q99NF1 532 aa28.52■■■□□ 2.16
Tpm1-216ENSMUST00000113707 Pus7B7ZNL8 666 aaKnown RBP28.51■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Akr1b1P45376 316 aa28.51■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Lmntd2Q0VET5 664 aa28.51■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Gpatch11Q3UFS4 262 aa28.51■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Mindy1Q76LS9 468 aa28.51■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Ipo4Q8VI75 1082 aa28.51■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Smtnl1Q99LM3 459 aa28.51■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Myl7Q9QVP4 175 aa28.51■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Plcg1Q62077 1302 aa28.51■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Chrna9G3X8Z7 479 aa28.51■■■□□ 2.15
Tpm1-216ENSMUST00000113707 SarsP26638 512 aaKnown RBP28.51■■■□□ 2.15
Tpm1-216ENSMUST00000113707 Traf5P70191 558 aa28.51■■■□□ 2.15
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms