RNA–Protein interactions for RNA: ENSMUST00000088716.11

Smarcc1-201, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,717 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-201ENSMUST00000088716 Gga1Q8R0H9 635 aa23.33■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Chmp2aQ9DB34 222 aa23.33■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 PycardQ9EPB4 193 aa23.33■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Popdc2Q9ES82 367 aa23.33■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Slc39a2G3X943 309 aa23.33■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Alppl2P24823 529 aa23.33■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Sox5P35710 763 aa23.33■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Prpf6Q91YR7 941 aaKnown RBP23.33■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Rnf14Q9JI90 485 aa23.33■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Fam81bA0A140LI28 432 aa23.33■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Fam228bQ497Q6 232 aa23.33■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Aldh18a1Q9Z110 795 aa23.33■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Vgll3P85442 326 aa23.32■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Kctd16Q5DTY9 427 aa23.32■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 FcgrtQ61559 365 aa23.32■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Lrch2Q3UMG5 773 aa23.32■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Ccdc84Q4VA36 332 aaKnown RBP23.32■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Terb1Q8C0V1 768 aa23.32■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Abcg3Q99P81 650 aa23.32■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Fem1bQ9Z2G0 627 aa23.32■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Cog7Q3UM29 770 aa23.32■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Rint1Q8BZ36 792 aa23.32■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 ZfaP23607 742 aa23.32■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Gad1P48318 593 aa23.32■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Atp11aP98197 1187 aa23.32■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Serpinb3dQ6UKZ0 387 aa23.32■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Trerf1Q8BXJ2 1205 aa23.32■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Sulf1Q8K007 870 aa23.32■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Rabgap1A2AWA9 1064 aa23.32■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Snap25P60879 206 aa23.32■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Mum1l1Q4VA55 681 aa23.32■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Caprin1Q60865 707 aaKnown RBP23.32■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Impg2Q80XH2 1243 aa23.32■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Slc26a6Q8CIW6 758 aa23.32■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Hip1Q8VD75 1029 aaKnown RBP23.32■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Mei1Q9D4I2 1268 aa23.32■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Gbp6A0A0G2JDV3 611 aa23.31■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Gm43302L7N1X8 611 aa23.31■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Nek8Q91ZR4 698 aa23.31■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Tnni1Q9WUZ5 187 aa23.31■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Pacsin2Q9WVE8 486 aaKnown RBP23.31■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Sec24cG3X972 1096 aaKnown RBP23.31■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Rpf1Q7TND5 349 aaKnown RBP23.31■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Ehd2Q8BH64 543 aa23.31■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Rims1Q99NE5 1463 aa23.31■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Abcb5B5X0E4 1255 aa23.31■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Zfp597E9Q6S0 419 aa23.31■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Nkiras1Q8CEC5 192 aa23.31■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Rassf9Q8K342 435 aa23.31■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Ophn1Q99J31 802 aa23.31■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Telo2Q9DC40 840 aaKnown RBP23.31■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Vmn2r78K7N6U5 853 aa23.31■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 PrimpolQ6P1E7 537 aa23.31■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 RubcnQ80U62 956 aa23.31■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Jade1Q6ZPI0 834 aaKnown RBP23.3■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Wbp11Q923D5 641 aaKnown RBP23.3■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Cpsf3Q9QXK7 684 aa23.3■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Kif14L0N7N1 1674 aaKnown RBP23.3■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Tcp11Q01755 566 aa23.3■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Mettl17Q3U2U7 461 aa23.3■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Gm10392Q3V3I3 114 aa23.3■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 UrgcpQ5NCI0 926 aa23.3■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 AmphQ7TQF7 686 aa23.3■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Ints4Q8CIM8 964 aa23.3■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Arhgap18Q8K0Q5 663 aa23.3■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Gadd45gQ9Z111 159 aa23.3■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Msh6P54276 1358 aaKnown RBP23.3■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Dclk2Q6PGN3 756 aa23.3■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Abhd8Q8R0P8 439 aa23.3■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Cox16Q9CR63 106 aa23.3■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Spata17Q9D552 379 aa23.3■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Arl6ip4Q9JM93 229 aa23.3■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Myo3bQ1EG27 1305 aa23.3■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Anks1aP59672 1150 aa23.3■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Add3Q9QYB5 706 aaKnown RBP23.3■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Exoc4O35382 975 aa23.3■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Orc4O88708 433 aa23.3■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Sptlc3Q8BG54 563 aa23.3■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Dnaaf1Q9D2H9 634 aa23.3■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Mcf2A2AEU1 1111 aa23.29■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 DffaO54786 331 aa23.29■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Trim71Q1PSW8 855 aaKnown RBP23.29■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Ireb2Q811J3 963 aaKnown RBP23.29■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Ddx25Q9QY15 484 aa23.29■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Lrriq4A6H6A4 596 aa23.29■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Qrich1Q3UA37 777 aa23.29■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 NntQ61941 1086 aaKnown RBP23.29■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 GypcQ78HU7 95 aa23.29■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Ces1dQ8VCT4 565 aa23.29■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Ppp1r16bQ8VHQ3 568 aa23.29■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Serpina9Q9D7D2 418 aa23.29■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Med14A2ABV5 1459 aaKnown RBP23.29■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Krt26Q3TRJ4 462 aa23.29■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Efcab14Q8BGQ6 484 aa23.29■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 AdarQ99MU3 1178 aaKnown RBP23.29■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Vstm4T1NXB5 319 aa23.29■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Tarbp1E9Q368 1579 aa23.29■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Myo1eE9Q634 1107 aa23.29■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Tmed1Q3V009 227 aa23.29■■□□□ 1.32
Smarcc1-201ENSMUST00000088716 Zfp341Q6PGC9 846 aa23.29■■□□□ 1.32
Retrieved 100 of 22,080 RNA–protein pairs in 15 ms