RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Ccdc40Q8BI79 1192 aa16.22■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Golph3Q9CRA5 298 aa16.22■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Ankrd2Q9WV06 328 aa16.22■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Psmd10Q9Z2X2 231 aa16.22■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Gm7168A0AUV4 508 aa16.21■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Prr5lA2AVJ5 370 aa16.21■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Tex35Q14BK3 207 aa16.21■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 HnrnpdQ60668 355 aaKnown RBP16.21■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Dnajc8Q6NZB0 253 aaKnown RBP16.21■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Ctage5Q8R311 779 aa16.21■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Armc9Q9D2I5 817 aa16.21■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Sel1lQ9Z2G6 790 aa16.21■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Serpinb6cW4VSP4 379 aa16.21■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Phlpp1Q8CHE4 1687 aa16.21■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Trappc11B2RXC1 1133 aa16.21■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Gm7347D3YYI9 267 aa16.21■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Fgd3O88842 733 aa16.21■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Gna15P30678 374 aa16.21■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Scp2P32020 547 aaKnown RBP16.21■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Trmt1Q3TX08 663 aa16.21■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Psg29Q3URN6 468 aa16.21■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Mum1l1Q4VA55 681 aa16.21■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Bola2Q8BGS2 86 aa16.21■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Krt79Q8VED5 531 aa16.21■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Ttc14Q9CSP9 761 aa16.21■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 AacsQ9D2R0 672 aa16.21■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 UvssaQ9D479 717 aa16.21■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Mad2l2Q9D752 211 aa16.21■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Mrpl12Q9DB15 201 aaKnown RBP16.21■□□□□ 0.19
Ushbp1-201ENSMUST00000049184 Ankrd63A2ARS0 390 aa16.2■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 HdgfP51859 237 aaKnown RBP16.2■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Mmp14P53690 582 aa16.2■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 TraddQ3U0V2 310 aa16.2■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Asic2Q925H0 512 aa16.2■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Cd274Q9EP73 290 aa16.2■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Capn15Q9JLG8 1095 aa16.2■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Gm4985A2ALC6 410 aa16.2■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Guca2bO09051 106 aa16.2■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Pja1O55176 578 aa16.2■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 FechP22315 420 aaKnown RBP16.2■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Gjc1P28229 396 aa16.2■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Ephb4P54761 987 aa16.2■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Senp1P59110 640 aa16.2■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Cdcp1Q5U462 833 aa16.2■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Pkn3Q8K045 878 aa16.2■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Pcdhb3Q91XZ7 784 aa16.2■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Nop56Q9D6Z1 580 aaKnown RBP16.2■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Mxra8Q9DBV4 442 aa16.2■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Apba1B2RUJ5 842 aa16.19■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Gm5814J3QP80 125 aa16.19■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Gucy1b3O54865 620 aa16.19■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Casp4P70343 373 aa16.19■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Pls1Q3V0K9 630 aa16.19■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 PRAG1Q571I4 1179 aa16.19■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 NkrfQ8BY02 690 aaKnown RBP16.19■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Senp2Q91ZX6 588 aa16.19■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Mrfap1Q9CQL7 125 aa16.19■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Erp44Q9D1Q6 406 aa16.19■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 4931423N10RikQ9D4J9 382 aa16.19■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Ccdc89Q9DA73 370 aa16.19■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Rnf4Q9QZS2 194 aa16.19■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 AdkP55264 361 aa16.19■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Tcerg1lQ3B807 590 aa16.19■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Aak1Q3UHJ0 959 aa16.19■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Abl2Q4JIM5 1182 aa16.19■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Ccpg1Q640L3 753 aa16.19■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Esco1Q69Z69 843 aa16.19■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Slf2Q6P9P0 1278 aa16.19■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Trim37Q6PCX9 961 aa16.19■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Lrrc4cQ8C031 640 aa16.19■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Bud13Q8R149 637 aa16.19■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Peak1Q69Z38 1735 aa16.19■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Ube4aE9Q735 1028 aa16.18■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 TyrobpO54885 114 aa16.18■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Ccdc138Q0VF22 680 aa16.18■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 HelqQ2VPA6 1069 aa16.18■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Lrig2Q52KR2 1054 aa16.18■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Kirrel3Q8BR86 778 aa16.18■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Psmd2Q8VDM4 908 aa16.18■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Xpo6Q924Z6 1125 aa16.18■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Kremen1Q99N43 473 aa16.18■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Haus2Q9CQS9 234 aa16.18■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 CpvlQ9D3S9 478 aa16.18■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Ccdc182Q9D9C6 152 aa16.18■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 1700018B08RikQ9DA83 213 aa16.18■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Gm28036V9GXJ1 658 aa16.18■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Gm7356A0A087WSA6 508 aa16.18■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Fam171a1A2ATK9 892 aa16.18■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Hsf3D0VYS2 492 aa16.18■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 R3hdm1E9Q9Q2 1135 aaKnown RBP16.18■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Abi2P62484 446 aa16.18■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Agbl1Q09M05 972 aa16.18■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 SlmapQ3URD3 845 aa16.18■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Drc1Q3USS3 753 aa16.18■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 ChukQ60680 745 aa16.18■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 E2f5Q61502 335 aa16.18■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Zdhhc24Q6IR37 284 aa16.18■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Krt9Q6RHW0 743 aa16.18■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Fgd5Q80UZ0 1219 aa16.18■□□□□ 0.18
Ushbp1-201ENSMUST00000049184 Wdr60Q8C761 999 aa16.18■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 37.7 ms