RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Slc5a5Q99PN0 618 aa16.58■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Lrrc57Q9D1G5 239 aa16.58■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Arhgap6O54834 987 aa16.58■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Trim43aQ3TL54 445 aa16.58■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Vmn1r209Q5NC97 312 aa16.58■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Gas8Q60779 478 aa16.58■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Dhx37Q6NZL1 1150 aa16.58■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Creb3l3Q91XE9 479 aa16.58■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Add1Q9QYC0 735 aaKnown RBP16.58■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Klra10Q9R1G6 266 aa16.58■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Rnf207Q3V3A7 635 aa16.57■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Pym1Q8CHP5 203 aaKnown RBP16.57■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Oxnad1Q8VE38 311 aa16.57■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Fut8Q9WTS2 575 aa16.57■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Trim10Q9WUH5 489 aa16.57■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Ttc38A3KMP2 465 aa16.57■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Ifi207E9Q3L4 978 aa16.57■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Nr1i3O35627 358 aa16.57■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Mpp3O88910 568 aa16.57■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 EporP14753 507 aa16.57■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Ptger2Q62053 362 aa16.57■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Ncapg2Q6DFV1 1138 aa16.57■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Nyap1Q6PFX7 833 aa16.57■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Naa35Q6PHQ8 725 aa16.57■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 WaslQ91YD9 501 aa16.57■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Erp44Q9D1Q6 406 aa16.57■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Nr2f2P43135 414 aa16.57■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Tnfaip8l3Q3TBL6 204 aa16.57■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Brip1Q5SXJ3 1174 aa16.57■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Ddx10Q80Y44 875 aaKnown RBP16.57■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Riox2Q8CD15 465 aa16.57■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Rbm41Q8JZV4 413 aa16.57■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 VillQ91YD6 859 aa16.57■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 CenphQ9QYM8 241 aa16.57■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Angptl3Q9R182 455 aa16.57■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Odf2A3KGV1 830 aaKnown RBP16.56■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Kifap3P70188 793 aa16.56■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 HmmrQ00547 794 aaKnown RBP16.56■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Rasip1Q3U0S6 961 aa16.56■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Ms4a5Q810P8 197 aa16.56■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Rfc4Q99J62 364 aa16.56■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Styxl1Q9DAR2 321 aa16.56■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Myoz2Q9JJW5 264 aa16.56■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Tfr2Q9JKX3 798 aa16.56■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Kcnh2O35219 1162 aa16.56■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 AurkbO70126 345 aa16.56■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Eps15P42567 897 aa16.56■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Mcl1P97287 331 aa16.56■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Ccpg1Q640L3 753 aa16.56■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Tlr11Q6R5P0 926 aa16.56■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Ttc7aQ8BGB2 858 aa16.56■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Erlin1Q91X78 346 aa16.56■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Prpf6Q91YR7 941 aaKnown RBP16.56■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 4931423N10RikQ9D4J9 382 aa16.56■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Flvcr1B2RXV4 560 aa16.55■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Tcp10bE9PYJ0 438 aa16.55■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Cetn3O35648 167 aa16.55■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 KhsrpQ3U0V1 748 aaKnown RBP16.55■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Igf2bp2Q5SF07 592 aaKnown RBP16.55■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Mkrn3Q60764 544 aa16.55■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Actn1Q7TPR4 892 aaKnown RBP16.55■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Ddx25Q9QY15 484 aa16.55■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Col4a5Q63ZW6 1691 aa16.55■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Nfxl1E9Q8I7 918 aaKnown RBP16.55■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Vmn2r78K7N6U5 853 aa16.55■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Pgrmc1O55022 195 aa16.55■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Gjb6P70689 261 aa16.55■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Large2Q5XPT3 690 aa16.55■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Pacsin1Q61644 441 aa16.55■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Pim2Q62070 370 aa16.55■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Gja3Q64448 417 aa16.55■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Spag7Q7TNE3 227 aaKnown RBP16.55■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Sugp2Q8CH09 1067 aa16.55■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Sgms1Q8VCQ6 419 aa16.55■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Ppp1r3aQ99MR9 1089 aa16.55■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Eid1Q9DCR4 169 aa16.55■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Azi2Q9QYP6 405 aa16.55■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 MybP06876 636 aa16.54■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Depdc1aQ8CIG0 804 aa16.54■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 AagabQ8R2R3 316 aa16.54■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Eps8l2Q99K30 729 aa16.54■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Mzb1Q9D8I1 188 aa16.54■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Cd44P15379 778 aa16.54■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Lrriq3Q14DL3 633 aa16.54■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Skap2Q3UND0 358 aa16.54■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Scfd1Q8BRF7 639 aaKnown RBP16.54■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Lrp2bpQ9D4C6 346 aa16.54■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 IkQ9Z1M8 557 aaKnown RBP16.54■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Esr2O08537 530 aa16.54■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Kdm7aQ3UWM4 940 aa16.54■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Hoxa13Q62424 386 aa16.54■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Ces1eQ64176 562 aa16.54■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Exoc3Q6KAR6 755 aa16.54■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 NfrkbQ6PIJ4 1296 aaKnown RBP16.54■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 F13a1Q8BH61 732 aa16.54■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Parp10Q8CIE4 960 aa16.54■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 F11Q91Y47 624 aa16.54■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Asic2Q925H0 512 aa16.54■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Spata17Q9D552 379 aa16.54■□□□□ 0.24
Nkx3-1-201ENSMUST00000022646 Mxra8Q9DBV4 442 aa16.54■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 54 ms