RNA–Protein interactions for RNA: ENSMUST00000020200.13

Cfap54-201, Transcript of Cilia- and flagella-associated protein 54, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Cfap54, Length 2,473 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54-201ENSMUST00000020200 Sec31aQ3UPL0 1230 aaKnown RBP12.09□□□□□ -0.47
Cfap54-201ENSMUST00000020200 Tsg101Q61187 391 aa12.09□□□□□ -0.47
Cfap54-201ENSMUST00000020200 Traf3ip3Q8C0G2 513 aa12.09□□□□□ -0.47
Cfap54-201ENSMUST00000020200 Trappc12Q8K2L8 797 aa12.09□□□□□ -0.47
Cfap54-201ENSMUST00000020200 Appl2Q8K3G9 662 aa12.09□□□□□ -0.47
Cfap54-201ENSMUST00000020200 Gpsm2Q8VDU0 679 aa12.09□□□□□ -0.47
Cfap54-201ENSMUST00000020200 CrygnQ8VHL5 183 aa12.09□□□□□ -0.47
Cfap54-201ENSMUST00000020200 Gcom1E9PZ54 550 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Pip4k2aO70172 405 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 NfibP97863 570 aaKnown RBP12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 MyzapQ3UIJ9 466 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Zfp953Q3UPV7 304 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Tmem232Q5K6N0 675 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Trak2Q6P9N8 913 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Pabpc4Q6PHQ9 660 aaKnown RBP12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Slc9c1Q6UJY2 1175 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Snd1Q78PY7 910 aaKnown RBP12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 RragaQ80X95 313 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 D130040H23RikQ8BII3 405 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Hgh1Q8C3I8 393 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Phf20l1Q8CCJ9 1013 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 MyripQ8K3I4 856 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Enox2Q8R0Z2 598 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Ddx41Q91VN6 622 aaKnown RBP12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Mrpl11Q9CQF0 192 aaKnown RBP12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Cmtr1Q9DBC3 837 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Trpc5Q9QX29 975 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Pex11aQ9Z211 246 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 C87977A2A958 498 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Fyb2A2A995 729 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Ccdc78D3Z5T1 437 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 ThbdP15306 577 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Ccdc84Q4VA36 332 aaKnown RBP12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Hspa4Q61316 841 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 LdhdQ7TNG8 484 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Pgrmc2Q80UU9 217 aaKnown RBP12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Tmco3Q8BH01 678 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Sap130Q8BIH0 1057 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Sash3Q8K352 380 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Znrd1-asQ8R0E5 213 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Slc25a38Q91XD8 326 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Ndfip2Q91ZP6 311 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Ppp1r3aQ99MR9 1089 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Lpin2Q99PI5 893 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Dbndd2Q9CRD4 158 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Tmem192Q9CXT7 266 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Fsip1Q9D3V5 435 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 4930548H24RikQ9D496 437 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Sapcd2Q9D818 391 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Rwdd2aQ9D9S3 292 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Zkscan5Q9Z1D8 819 aa12.08□□□□□ -0.48
Cfap54-201ENSMUST00000020200 H2afxP27661 143 aaKnown RBP12.07□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Ifnar1P33896 590 aa12.07□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Bace1P56818 501 aa12.07□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Actn4P57780 912 aaKnown RBP12.07□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Tnfaip8l3Q3TBL6 204 aa12.07□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Psmd1Q3TXS7 953 aa12.07□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Brd9Q3UQU0 596 aaKnown RBP12.07□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Spag5Q7TME2 1165 aa12.07□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Pnpla2Q8BJ56 486 aa12.07□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Snapc2Q91XA5 359 aa12.07□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Mettl16Q9CQG2 553 aaKnown RBP12.07□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Ccdc43Q9CR29 222 aaKnown RBP12.07□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Galnt15Q9D2N8 638 aa12.07□□□□□ -0.48
Cfap54-201ENSMUST00000020200 PdclQ9DBX2 301 aa12.07□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Myl7Q9QVP4 175 aa12.07□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Tjp3Q9QXY1 905 aa12.07□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Sec14l1A8Y5H7 715 aa12.06□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Cpb1B2RS76 415 aa12.06□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Scarf1Q5ND28 820 aa12.06□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Tpm4Q6IRU2 248 aa12.06□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Rhbdf1Q6PIX5 856 aa12.06□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Kbtbd13Q8C828 458 aa12.06□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Ppfibp1Q8C8U0 969 aaKnown RBP12.06□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Srgap2Q91Z67 1071 aa12.06□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Dnajc14Q921R4 703 aa12.06□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Kif17Q99PW8 1038 aa12.06□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Cdca7Q9D0M2 382 aa12.06□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Tgm5Q9D7I9 724 aa12.06□□□□□ -0.48
Cfap54-201ENSMUST00000020200 PpihQ9D868 188 aa12.06□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Arhgef7Q9ES28 862 aa12.06□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Apol10bG3X9K7 334 aa12.06□□□□□ -0.48
Cfap54-201ENSMUST00000020200 PurbO35295 324 aaKnown RBP12.06□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Trim43cP86449 446 aa12.06□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Sema4bQ62179 823 aa12.06□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Lrrn2Q6PHP6 730 aa12.06□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Atp1a2Q6PIE5 1020 aa12.06□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Tlr13Q6R5N8 991 aa12.06□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Tmc3Q7TQ69 1130 aa12.06□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Haus4Q8BFT2 363 aa12.06□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Nr3c2Q8VII8 978 aa12.06□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Eif4a3Q91VC3 411 aaKnown RBP12.06□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Eef1gQ9D8N0 437 aaKnown RBP12.06□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Ccdc89Q9DA73 370 aa12.06□□□□□ -0.48
Cfap54-201ENSMUST00000020200 DexiQ9WUQ7 95 aa12.06□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Ttc38A3KMP2 465 aa12.05□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Vmn2r78K7N6U5 853 aa12.05□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Nmt1O70310 496 aaKnown RBP12.05□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Nr2f2P43135 414 aa12.05□□□□□ -0.48
Cfap54-201ENSMUST00000020200 Traf5P70191 558 aa12.05□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 27.1 ms