RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 ERVK-21P61565 698 aa11.66□□□□□ -0.54
PHGDH-222ENST00000641587 STXBP2Q15833 593 aa11.66□□□□□ -0.54
PHGDH-222ENST00000641587 DGKDQ16760 1214 aa11.66□□□□□ -0.54
PHGDH-222ENST00000641587 KIAA0753Q2KHM9 967 aa11.66□□□□□ -0.54
PHGDH-222ENST00000641587 C7orf31Q8N865 590 aa11.66□□□□□ -0.54
PHGDH-222ENST00000641587 PNMA1Q8ND90 353 aa11.66□□□□□ -0.54
PHGDH-222ENST00000641587 RGS22Q8NE09 1264 aa11.66□□□□□ -0.54
PHGDH-222ENST00000641587 NSUN6Q8TEA1 469 aaKnown RBP11.66□□□□□ -0.54
PHGDH-222ENST00000641587 ZFP91Q96JP5 570 aaPredicted RBP11.66□□□□□ -0.54
PHGDH-222ENST00000641587 TTC14Q96N46 770 aa11.66□□□□□ -0.54
PHGDH-222ENST00000641587 RAD9AQ99638 391 aa11.66□□□□□ -0.54
PHGDH-222ENST00000641587 OSBPL7Q9BZF2 842 aa11.66□□□□□ -0.54
PHGDH-222ENST00000641587 PNMA2Q9UL42 364 aa11.66□□□□□ -0.54
PHGDH-222ENST00000641587 MRVI1Q9Y6F6 885 aa11.66□□□□□ -0.54
PHGDH-222ENST00000641587 ATG2AQ2TAZ0 1938 aa11.65□□□□□ -0.54
PHGDH-222ENST00000641587 ABHD14A-ACY1A0A1B0GW23 586 aa11.65□□□□□ -0.54
PHGDH-222ENST00000641587 HAS3O00219 553 aa11.65□□□□□ -0.54
PHGDH-222ENST00000641587 OPLAHO14841 1288 aa11.65□□□□□ -0.54
PHGDH-222ENST00000641587 GPR37L1O60883 481 aa11.65□□□□□ -0.54
PHGDH-222ENST00000641587 REC8O95072 547 aa11.65□□□□□ -0.54
PHGDH-222ENST00000641587 ARHGEF16Q5VV41 709 aa11.65□□□□□ -0.54
PHGDH-222ENST00000641587 TICAM2Q86XR7 235 aa11.65□□□□□ -0.54
PHGDH-222ENST00000641587 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.65□□□□□ -0.54
PHGDH-222ENST00000641587 VAT1LQ9HCJ6 419 aa11.65□□□□□ -0.54
PHGDH-222ENST00000641587 ANO2Q9NQ90 1003 aa11.65□□□□□ -0.54
PHGDH-222ENST00000641587 PXMP2Q9NR77 195 aa11.65□□□□□ -0.54
PHGDH-222ENST00000641587 DOCK5Q9H7D0 1870 aa11.64□□□□□ -0.55
PHGDH-222ENST00000641587 MUC6Q6W4X9 2439 aa11.64□□□□□ -0.55
PHGDH-222ENST00000641587 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.64□□□□□ -0.55
PHGDH-222ENST00000641587 B4E1Z4 1266 aa11.64□□□□□ -0.55
PHGDH-222ENST00000641587 PI4K2BG5E9Z4 385 aa11.64□□□□□ -0.55
PHGDH-222ENST00000641587 SGSM2O43147 1006 aa11.64□□□□□ -0.55
PHGDH-222ENST00000641587 DHX16O60231 1041 aaKnown RBP11.64□□□□□ -0.55
PHGDH-222ENST00000641587 KDM4AO75164 1064 aa11.64□□□□□ -0.55
PHGDH-222ENST00000641587 RGS20O76081 388 aa11.64□□□□□ -0.55
PHGDH-222ENST00000641587 CFBP00751 764 aa11.64□□□□□ -0.55
PHGDH-222ENST00000641587 NR3C2P08235 984 aa11.64□□□□□ -0.55
PHGDH-222ENST00000641587 PTK7Q13308 1070 aa11.64□□□□□ -0.55
PHGDH-222ENST00000641587 MKRN4PQ13434 485 aaPredicted RBP11.64□□□□□ -0.55
PHGDH-222ENST00000641587 IKBKEQ14164 716 aa11.64□□□□□ -0.55
PHGDH-222ENST00000641587 HSDL1Q3SXM5 330 aa11.64□□□□□ -0.55
PHGDH-222ENST00000641587 FBXO11Q86XK2 927 aa11.64□□□□□ -0.55
PHGDH-222ENST00000641587 FAM178BQ8IXR5 827 aa11.64□□□□□ -0.55
PHGDH-222ENST00000641587 MYOCDQ8IZQ8 938 aa11.64□□□□□ -0.55
PHGDH-222ENST00000641587 FBXO22Q8NEZ5 403 aa11.64□□□□□ -0.55
PHGDH-222ENST00000641587 DBF4BQ8NFT6 615 aa11.64□□□□□ -0.55
PHGDH-222ENST00000641587 IL31RAQ8NI17 732 aa11.64□□□□□ -0.55
PHGDH-222ENST00000641587 PPTC7Q8NI37 304 aa11.64□□□□□ -0.55
PHGDH-222ENST00000641587 ESR2Q92731 530 aa11.64□□□□□ -0.55
PHGDH-222ENST00000641587 GPKOWQ92917 476 aaPredicted RBP eCLIP11.64□□□□□ -0.55
PHGDH-222ENST00000641587 EMID1Q96A84 441 aaPredicted RBP11.64□□□□□ -0.55
PHGDH-222ENST00000641587 IWS1Q96ST2 819 aa11.64□□□□□ -0.55
PHGDH-222ENST00000641587 JMJD4Q9H9V9 463 aa11.64□□□□□ -0.55
PHGDH-222ENST00000641587 LMCD1Q9NZU5 365 aa11.64□□□□□ -0.55
PHGDH-222ENST00000641587 MYO7AQ13402 2215 aa11.64□□□□□ -0.55
PHGDH-222ENST00000641587 NLRC5Q86WI3 1866 aa11.63□□□□□ -0.55
PHGDH-222ENST00000641587 H3BQ06 376 aaPredicted RBP11.63□□□□□ -0.55
PHGDH-222ENST00000641587 PPP1R11O60927 126 aaPredicted RBP11.63□□□□□ -0.55
PHGDH-222ENST00000641587 LGR5O75473 907 aa11.63□□□□□ -0.55
PHGDH-222ENST00000641587 PARNO95453 639 aaKnown RBP11.63□□□□□ -0.55
PHGDH-222ENST00000641587 SEC24BO95487 1268 aa11.63□□□□□ -0.55
PHGDH-222ENST00000641587 PCP11498 1178 aaKnown RBP11.63□□□□□ -0.55
PHGDH-222ENST00000641587 MYCLP12524 364 aaPredicted RBP11.63□□□□□ -0.55
PHGDH-222ENST00000641587 THPOP40225 353 aa11.63□□□□□ -0.55
PHGDH-222ENST00000641587 LAMC2Q13753 1193 aa11.63□□□□□ -0.55
PHGDH-222ENST00000641587 LEXMQ3ZCV2 418 aa11.63□□□□□ -0.55
PHGDH-222ENST00000641587 ASPRV1Q53RT3 343 aa11.63□□□□□ -0.55
PHGDH-222ENST00000641587 DGKHQ86XP1 1220 aa11.63□□□□□ -0.55
PHGDH-222ENST00000641587 MCF2L2Q86YR7 1114 aa11.63□□□□□ -0.55
PHGDH-222ENST00000641587 DHX37Q8IY37 1157 aaKnown RBP11.63□□□□□ -0.55
PHGDH-222ENST00000641587 GJD3Q8N144 294 aa11.63□□□□□ -0.55
PHGDH-222ENST00000641587 STAG2Q8N3U4 1231 aa11.63□□□□□ -0.55
PHGDH-222ENST00000641587 ENAHQ8N8S7 591 aaPredicted RBP11.63□□□□□ -0.55
PHGDH-222ENST00000641587 KATNAL1Q9BW62 490 aa11.63□□□□□ -0.55
PHGDH-222ENST00000641587 RNF41Q9H4P4 317 aaPredicted RBP11.63□□□□□ -0.55
PHGDH-222ENST00000641587 BCAS3Q9H6U6 928 aa11.63□□□□□ -0.55
PHGDH-222ENST00000641587 KAT14Q9H8E8 782 aa11.63□□□□□ -0.55
PHGDH-222ENST00000641587 MRPL11Q9Y3B7 192 aaKnown RBP11.63□□□□□ -0.55
PHGDH-222ENST00000641587 ZNF213O14771 459 aa11.62□□□□□ -0.55
PHGDH-222ENST00000641587 EIF3JO75822 258 aaKnown RBP11.62□□□□□ -0.55
PHGDH-222ENST00000641587 GGPS1O95749 300 aa11.62□□□□□ -0.55
PHGDH-222ENST00000641587 CTSHP09668 335 aa11.62□□□□□ -0.55
PHGDH-222ENST00000641587 HOXD8P13378 290 aaPredicted RBP11.62□□□□□ -0.55
PHGDH-222ENST00000641587 HOXA13P31271 388 aaPredicted RBP11.62□□□□□ -0.55
PHGDH-222ENST00000641587 SSTR3P32745 418 aaPredicted RBP11.62□□□□□ -0.55
PHGDH-222ENST00000641587 HSD17B4P51659 736 aa11.62□□□□□ -0.55
PHGDH-222ENST00000641587 SP2Q02086 613 aa11.62□□□□□ -0.55
PHGDH-222ENST00000641587 MYSM1Q5VVJ2 828 aa11.62□□□□□ -0.55
PHGDH-222ENST00000641587 PTCRAQ6ISU1 281 aaPredicted RBP11.62□□□□□ -0.55
PHGDH-222ENST00000641587 IQCA1Q86XH1 822 aa11.62□□□□□ -0.55
PHGDH-222ENST00000641587 SPATA33Q96N06 139 aa11.62□□□□□ -0.55
PHGDH-222ENST00000641587 ZSCAN10Q96SZ4 725 aaPredicted RBP11.62□□□□□ -0.55
PHGDH-222ENST00000641587 PDCD2LQ9BRP1 358 aa11.62□□□□□ -0.55
PHGDH-222ENST00000641587 IL25Q9H293 177 aa11.62□□□□□ -0.55
PHGDH-222ENST00000641587 ARIH1Q9Y4X5 557 aaPredicted RBP11.62□□□□□ -0.55
PHGDH-222ENST00000641587 BAZ2BQ9UIF8 2168 aaKnown RBP11.61□□□□□ -0.55
PHGDH-222ENST00000641587 RSPH10B2B2RC85 870 aa11.61□□□□□ -0.55
PHGDH-222ENST00000641587 EFCAB14O75071 495 aa11.61□□□□□ -0.55
PHGDH-222ENST00000641587 UPP2O95045 317 aa11.61□□□□□ -0.55
PHGDH-222ENST00000641587 PARP1P09874 1014 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms