RNA–Protein interactions for RNA: ENST00000641513.1

PHGDH-219, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-219ENST00000641513 KCNMB3Q9NPA1 279 aa9.93□□□□□ -0.82
PHGDH-219ENST00000641513 RABGAP1Q9Y3P9 1069 aa9.93□□□□□ -0.82
PHGDH-219ENST00000641513 RIPK3Q9Y572 518 aa9.93□□□□□ -0.82
PHGDH-219ENST00000641513 UTRNP46939 3433 aa9.93□□□□□ -0.82
PHGDH-219ENST00000641513 PLXNB2O15031 1838 aa9.93□□□□□ -0.82
PHGDH-219ENST00000641513 KDM3AQ9Y4C1 1321 aa9.92□□□□□ -0.82
PHGDH-219ENST00000641513 SMTNL1A8MU46 457 aa9.92□□□□□ -0.82
PHGDH-219ENST00000641513 TBX3O15119 743 aa9.92□□□□□ -0.82
PHGDH-219ENST00000641513 MSH4O15457 936 aa9.92□□□□□ -0.82
PHGDH-219ENST00000641513 TUBB4AP04350 444 aa9.92□□□□□ -0.82
PHGDH-219ENST00000641513 RPN1P04843 607 aaKnown RBP9.92□□□□□ -0.82
PHGDH-219ENST00000641513 OSBPP22059 807 aa9.92□□□□□ -0.82
PHGDH-219ENST00000641513 RPS6P62753 249 aaKnown RBP9.92□□□□□ -0.82
PHGDH-219ENST00000641513 AMPD3Q01432 767 aa9.92□□□□□ -0.82
PHGDH-219ENST00000641513 DPYDQ12882 1025 aa9.92□□□□□ -0.82
PHGDH-219ENST00000641513 MKRN3Q13064 507 aaKnown RBP9.92□□□□□ -0.82
PHGDH-219ENST00000641513 PABPC4Q13310 644 aaKnown RBP eCLIP9.92□□□□□ -0.82
PHGDH-219ENST00000641513 GRB10Q13322 594 aa9.92□□□□□ -0.82
PHGDH-219ENST00000641513 BAATQ14032 418 aaPredicted RBP9.92□□□□□ -0.82
PHGDH-219ENST00000641513 TKFCQ3LXA3 575 aa9.92□□□□□ -0.82
PHGDH-219ENST00000641513 CT47A1Q5JQC4 288 aaPredicted RBP9.92□□□□□ -0.82
PHGDH-219ENST00000641513 ARHGEF16Q5VV41 709 aa9.92□□□□□ -0.82
PHGDH-219ENST00000641513 FASTKD5Q7L8L6 764 aaKnown RBP9.92□□□□□ -0.82
PHGDH-219ENST00000641513 DHX40Q8IX18 779 aaKnown RBP9.92□□□□□ -0.82
PHGDH-219ENST00000641513 SAMD3Q8N6K7 520 aa9.92□□□□□ -0.82
PHGDH-219ENST00000641513 C2orf69Q8N8R5 385 aa9.92□□□□□ -0.82
PHGDH-219ENST00000641513 TRIML1Q8N9V2 468 aa9.92□□□□□ -0.82
PHGDH-219ENST00000641513 REPS2Q8NFH8 660 aa9.92□□□□□ -0.82
PHGDH-219ENST00000641513 ETNPPLQ8TBG4 499 aa9.92□□□□□ -0.82
PHGDH-219ENST00000641513 SYTL5Q8TDW5 730 aaPredicted RBP9.92□□□□□ -0.82
PHGDH-219ENST00000641513 PNMA5Q96PV4 448 aa9.92□□□□□ -0.82
PHGDH-219ENST00000641513 RMDN3Q96TC7 470 aa9.92□□□□□ -0.82
PHGDH-219ENST00000641513 MMTAG2Q9BU76 263 aaKnown RBP9.92□□□□□ -0.82
PHGDH-219ENST00000641513 ACAD9Q9H845 621 aa9.92□□□□□ -0.82
PHGDH-219ENST00000641513 MAGEF1Q9HAY2 307 aa9.92□□□□□ -0.82
PHGDH-219ENST00000641513 RMND1Q9NWS8 449 aa9.92□□□□□ -0.82
PHGDH-219ENST00000641513 MAP3K20Q9NYL2 800 aaKnown RBP9.92□□□□□ -0.82
PHGDH-219ENST00000641513 PKD2L1Q9P0L9 805 aa9.92□□□□□ -0.82
PHGDH-219ENST00000641513 COL20A1Q9P218 1284 aa9.92□□□□□ -0.82
PHGDH-219ENST00000641513 ADAMTS5Q9UNA0 930 aa9.92□□□□□ -0.82
PHGDH-219ENST00000641513 MCM3APO60318 1980 aa9.92□□□□□ -0.82
PHGDH-219ENST00000641513 RPTORQ8N122 1335 aa9.91□□□□□ -0.82
PHGDH-219ENST00000641513 KIF2AO00139 706 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-219ENST00000641513 CHMP2AO43633 222 aa9.91□□□□□ -0.82
PHGDH-219ENST00000641513 GAS7O60861 476 aa9.91□□□□□ -0.82
PHGDH-219ENST00000641513 CELF2O95319 508 aaKnown RBP9.91□□□□□ -0.82
PHGDH-219ENST00000641513 SSBP05455 408 aaKnown RBP eCLIP9.91□□□□□ -0.82
PHGDH-219ENST00000641513 SARSP49591 514 aaKnown RBP9.91□□□□□ -0.82
PHGDH-219ENST00000641513 ASIC1P78348 528 aa9.91□□□□□ -0.82
PHGDH-219ENST00000641513 SETQ01105 290 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-219ENST00000641513 SNAPC2Q13487 334 aa9.91□□□□□ -0.82
PHGDH-219ENST00000641513 MORC3Q14149 939 aa9.91□□□□□ -0.82
PHGDH-219ENST00000641513 MCM6Q14566 821 aa9.91□□□□□ -0.82
PHGDH-219ENST00000641513 HSP90AA2PQ14568 343 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-219ENST00000641513 CEP55Q53EZ4 464 aa9.91□□□□□ -0.82
PHGDH-219ENST00000641513 NAALADL2Q58DX5 795 aa9.91□□□□□ -0.82
PHGDH-219ENST00000641513 LRCH2Q5VUJ6 765 aa9.91□□□□□ -0.82
PHGDH-219ENST00000641513 HAUS3Q68CZ6 603 aa9.91□□□□□ -0.82
PHGDH-219ENST00000641513 SV2BQ7L1I2 683 aa9.91□□□□□ -0.82
PHGDH-219ENST00000641513 MLKLQ8NB16 471 aa9.91□□□□□ -0.82
PHGDH-219ENST00000641513 LENG9Q96B70 501 aa9.91□□□□□ -0.82
PHGDH-219ENST00000641513 GSDMAQ96QA5 445 aa9.91□□□□□ -0.82
PHGDH-219ENST00000641513 NUDT12Q9BQG2 462 aa9.91□□□□□ -0.82
PHGDH-219ENST00000641513 MXRA8Q9BRK3 442 aa9.91□□□□□ -0.82
PHGDH-219ENST00000641513 ZNF577Q9BSK1 485 aa9.91□□□□□ -0.82
PHGDH-219ENST00000641513 NT5C3AQ9H0P0 336 aa9.91□□□□□ -0.82
PHGDH-219ENST00000641513 ASCC2Q9H1I8 757 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-219ENST00000641513 GBA2Q9HCG7 927 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-219ENST00000641513 NMRK2Q9NPI5 230 aa9.91□□□□□ -0.82
PHGDH-219ENST00000641513 STK17AQ9UEE5 414 aa9.91□□□□□ -0.82
PHGDH-219ENST00000641513 ZNF214Q9UL59 606 aaPredicted RBP9.91□□□□□ -0.82
PHGDH-219ENST00000641513 AGTPBP1Q9UPW5 1226 aa9.91□□□□□ -0.82
PHGDH-219ENST00000641513 KCNH4Q9UQ05 1017 aa9.91□□□□□ -0.82
PHGDH-219ENST00000641513 IGLV3-22A0A075B6J6 115 aa9.9□□□□□ -0.82
PHGDH-219ENST00000641513 DDX39AO00148 427 aaKnown RBP9.9□□□□□ -0.82
PHGDH-219ENST00000641513 PEX10O60683 326 aa9.9□□□□□ -0.82
PHGDH-219ENST00000641513 ARP10275 920 aa9.9□□□□□ -0.82
PHGDH-219ENST00000641513 PTGS1P23219 599 aa9.9□□□□□ -0.82
PHGDH-219ENST00000641513 CCND2P30279 289 aa9.9□□□□□ -0.82
PHGDH-219ENST00000641513 HOXA7P31268 230 aaPredicted RBP9.9□□□□□ -0.82
PHGDH-219ENST00000641513 HERVK_113P62684 666 aa9.9□□□□□ -0.82
PHGDH-219ENST00000641513 PGM5Q15124 567 aa9.9□□□□□ -0.82
PHGDH-219ENST00000641513 TMEM119Q4V9L6 283 aa9.9□□□□□ -0.82
PHGDH-219ENST00000641513 LDLRAD1Q5T700 205 aa9.9□□□□□ -0.82
PHGDH-219ENST00000641513 NT5DC1Q5TFE4 455 aa9.9□□□□□ -0.82
PHGDH-219ENST00000641513 PCNX4Q63HM2 1172 aa9.9□□□□□ -0.82
PHGDH-219ENST00000641513 KLHL10Q6JEL2 608 aa9.9□□□□□ -0.82
PHGDH-219ENST00000641513 CCDC186Q7Z3E2 898 aa9.9□□□□□ -0.82
PHGDH-219ENST00000641513 NCAPG2Q86XI2 1143 aa9.9□□□□□ -0.82
PHGDH-219ENST00000641513 DRC7Q8IY82 874 aa9.9□□□□□ -0.82
PHGDH-219ENST00000641513 ANKRD35Q8N283 1001 aa9.9□□□□□ -0.82
PHGDH-219ENST00000641513 MB21D1Q8N884 522 aa9.9□□□□□ -0.82
PHGDH-219ENST00000641513 CCDC150Q8NCX0 1101 aa9.9□□□□□ -0.82
PHGDH-219ENST00000641513 IL31RAQ8NI17 732 aa9.9□□□□□ -0.82
PHGDH-219ENST00000641513 LARP4BQ92615 738 aaKnown RBP9.9□□□□□ -0.82
PHGDH-219ENST00000641513 RAD54LQ92698 747 aa9.9□□□□□ -0.82
PHGDH-219ENST00000641513 PURBQ96QR8 312 aaKnown RBP9.9□□□□□ -0.82
PHGDH-219ENST00000641513 MTRQ99707 1265 aa9.9□□□□□ -0.82
PHGDH-219ENST00000641513 TEKT3Q9BXF9 490 aa9.9□□□□□ -0.82
PHGDH-219ENST00000641513 LRRC27Q9C0I9 530 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms