RNA–Protein interactions for RNA: ENST00000640131.1

SPIN3-236, Transcript of spindlin family member 3, humanhuman

TSL 1 (best)

Gene SPIN3, Length 2,938 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-236ENST00000640131 MYO6Q9UM54 1294 aa13.69□□□□□ -0.22
SPIN3-236ENST00000640131 SCAF8Q9UPN6 1271 aaKnown RBP13.69□□□□□ -0.22
SPIN3-236ENST00000640131 RNF225M0QZC1 329 aaPredicted RBP13.69□□□□□ -0.22
SPIN3-236ENST00000640131 OR52Z1P0C646 297 aa13.69□□□□□ -0.22
SPIN3-236ENST00000640131 PYGBP11216 843 aa13.69□□□□□ -0.22
SPIN3-236ENST00000640131 NPR1P16066 1061 aa13.69□□□□□ -0.22
SPIN3-236ENST00000640131 SHMT1P34896 483 aa13.69□□□□□ -0.22
SPIN3-236ENST00000640131 PAK1Q13153 545 aa13.69□□□□□ -0.22
SPIN3-236ENST00000640131 DYMQ7RTS9 669 aa13.69□□□□□ -0.22
SPIN3-236ENST00000640131 MYLK4Q86YV6 388 aaPredicted RBP13.69□□□□□ -0.22
SPIN3-236ENST00000640131 TEKT1Q969V4 418 aa13.69□□□□□ -0.22
SPIN3-236ENST00000640131 SPZ1Q9BXG8 430 aa13.69□□□□□ -0.22
SPIN3-236ENST00000640131 PDGFDQ9GZP0 370 aaPredicted RBP13.69□□□□□ -0.22
SPIN3-236ENST00000640131 ZMYND12Q9H0C1 365 aa13.69□□□□□ -0.22
SPIN3-236ENST00000640131 SH3GLB2Q9NR46 395 aa13.69□□□□□ -0.22
SPIN3-236ENST00000640131 BLOC1S6Q9UL45 172 aa13.69□□□□□ -0.22
SPIN3-236ENST00000640131 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.69□□□□□ -0.22
SPIN3-236ENST00000640131 PPP2R2CQ9Y2T4 447 aa13.69□□□□□ -0.22
SPIN3-236ENST00000640131 DDTLA6NHG4 134 aaPredicted RBP13.68□□□□□ -0.22
SPIN3-236ENST00000640131 PPP1R11O60927 126 aaPredicted RBP13.68□□□□□ -0.22
SPIN3-236ENST00000640131 ERLIN1O75477 346 aa13.68□□□□□ -0.22
SPIN3-236ENST00000640131 FCER1AP12319 257 aa13.68□□□□□ -0.22
SPIN3-236ENST00000640131 CRKP46108 304 aa13.68□□□□□ -0.22
SPIN3-236ENST00000640131 MAP3K9P80192 1104 aa13.68□□□□□ -0.22
SPIN3-236ENST00000640131 AOC3Q16853 763 aa13.68□□□□□ -0.22
SPIN3-236ENST00000640131 APOBEC3HQ6NTF7 200 aaKnown RBP13.68□□□□□ -0.22
SPIN3-236ENST00000640131 NEK8Q86SG6 692 aa13.68□□□□□ -0.22
SPIN3-236ENST00000640131 ADGRF4Q8IZF3 695 aa13.68□□□□□ -0.22
SPIN3-236ENST00000640131 NLGN1Q8N2Q7 840 aa13.68□□□□□ -0.22
SPIN3-236ENST00000640131 LMBR1Q8WVP7 490 aa13.68□□□□□ -0.22
SPIN3-236ENST00000640131 L1RE1Q9UN81 338 aa13.68□□□□□ -0.22
SPIN3-236ENST00000640131 A0A1B0GTH6 734 aa13.68□□□□□ -0.22
SPIN3-236ENST00000640131 NKRFO15226 690 aaKnown RBP eCLIP13.68□□□□□ -0.22
SPIN3-236ENST00000640131 RNF40O75150 1001 aa13.68□□□□□ -0.22
SPIN3-236ENST00000640131 FXR1P51114 621 aaKnown RBP eCLIP13.68□□□□□ -0.22
SPIN3-236ENST00000640131 ASIC1P78348 528 aa13.68□□□□□ -0.22
SPIN3-236ENST00000640131 TLDC1Q6P9B6 456 aa13.68□□□□□ -0.22
SPIN3-236ENST00000640131 PPFIBP1Q86W92 1011 aa13.68□□□□□ -0.22
SPIN3-236ENST00000640131 ACRBPQ8NEB7 543 aa13.68□□□□□ -0.22
SPIN3-236ENST00000640131 FSBPO95073 299 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 RPSAP08865 295 aaKnown RBP13.67□□□□□ -0.22
SPIN3-236ENST00000640131 IMPDH2P12268 514 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 RANBP1P43487 201 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 SLC8A3P57103 927 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 USP4Q13107 963 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 TBX2Q13207 712 aaPredicted RBP13.67□□□□□ -0.22
SPIN3-236ENST00000640131 THEMIS2Q5TEJ8 643 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 ELOA2Q8IYF1 753 aaPredicted RBP13.67□□□□□ -0.22
SPIN3-236ENST00000640131 WDR24Q96S15 920 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 DNAJC18Q9H819 358 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 ADD3Q9UEY8 706 aaKnown RBP13.67□□□□□ -0.22
SPIN3-236ENST00000640131 SCN9AQ15858 1988 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 KCNJ18B7U540 433 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 USP17L15C9J2P7 530 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 USP17L13C9JLJ4 530 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 USP17L11C9JVI0 530 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 USP17L18D6R9N7 530 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 USP17L22D6RA61 530 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 USP17L17D6RBQ6 530 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 USP17L19D6RCP7 530 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 USP17L20D6RJB6 530 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 KIAA0754O94854 1291 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 OATP04181 439 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 KCNJ6P48051 423 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 GNG11P61952 73 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 USP17L24Q0WX57 530 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 IKQ13123 557 aaPredicted RBP13.67□□□□□ -0.22
SPIN3-236ENST00000640131 KCNJ12Q14500 433 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 CASP8Q14790 479 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 ARL6IP4Q66PJ3 421 aaKnown RBP13.67□□□□□ -0.22
SPIN3-236ENST00000640131 USP17L6PQ6QN14 398 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 EZH1Q92800 747 aaPredicted RBP13.67□□□□□ -0.22
SPIN3-236ENST00000640131 FAM163AQ96GL9 167 aaPredicted RBP13.67□□□□□ -0.22
SPIN3-236ENST00000640131 NUDT12Q9BQG2 462 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 ZSWIM4Q9H7M6 989 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 MRPL44Q9H9J2 332 aaKnown RBP13.67□□□□□ -0.22
SPIN3-236ENST00000640131 ABCB6Q9NP58 842 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.67□□□□□ -0.221e-18■■■■■ 447.2
SPIN3-236ENST00000640131 HOMER3Q9NSC5 361 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 MYH4Q9Y623 1939 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 COL11A2P13942 1736 aaPredicted RBP13.67□□□□□ -0.22
SPIN3-236ENST00000640131 SHTN1A0MZ66 631 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 AKR1B15C9JRZ8 316 aaPredicted RBP13.67□□□□□ -0.22
SPIN3-236ENST00000640131 TPD52L2O43399 206 aaKnown RBP13.67□□□□□ -0.22
SPIN3-236ENST00000640131 RTN3O95197 1032 aaPredicted RBP13.67□□□□□ -0.22
SPIN3-236ENST00000640131 GNA11P29992 359 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 CD151P48509 253 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 GABPAQ06546 454 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 ZNF658Q5TYW1 1059 aaPredicted RBP13.67□□□□□ -0.22
SPIN3-236ENST00000640131 CDKAL1Q5VV42 579 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 TRIM47Q96LD4 638 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 RABEP2Q9H5N1 569 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 TDRD3Q9H7E2 651 aaKnown RBP13.67□□□□□ -0.22
SPIN3-236ENST00000640131 JMJD4Q9H9V9 463 aa13.67□□□□□ -0.22
SPIN3-236ENST00000640131 SMCHD1A6NHR9 2005 aa13.66□□□□□ -0.22
SPIN3-236ENST00000640131 TTLL1O95922 423 aa13.66□□□□□ -0.22
SPIN3-236ENST00000640131 ABL1P00519 1130 aa13.66□□□□□ -0.22
SPIN3-236ENST00000640131 SSBP05455 408 aaKnown RBP eCLIP13.66□□□□□ -0.22
SPIN3-236ENST00000640131 ADCY7P51828 1080 aa13.66□□□□□ -0.22
SPIN3-236ENST00000640131 PDE4DQ08499 809 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms