RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 SV2BQ7L1I2 683 aa16.85■□□□□ 0.29
TRIM3-215ENST00000639856 BLOC1S4Q9NUP1 217 aa16.85■□□□□ 0.29
TRIM3-215ENST00000639856 CGNQ9P2M7 1197 aaKnown RBP16.85■□□□□ 0.29
TRIM3-215ENST00000639856 BICDL2A1A5D9 508 aa16.84■□□□□ 0.29
TRIM3-215ENST00000639856 SPDYE3A6NKU9 549 aa16.84■□□□□ 0.29
TRIM3-215ENST00000639856 CCNE1P24864 410 aa16.84■□□□□ 0.29
TRIM3-215ENST00000639856 STK4Q13043 487 aa16.84■□□□□ 0.29
TRIM3-215ENST00000639856 COBLL1Q53SF7 1204 aa16.84■□□□□ 0.29
TRIM3-215ENST00000639856 P2RX5Q93086 422 aa16.84■□□□□ 0.29
TRIM3-215ENST00000639856 PNMA5Q96PV4 448 aa16.84■□□□□ 0.29
TRIM3-215ENST00000639856 DUSP9Q99956 384 aaKnown RBP16.84■□□□□ 0.29
TRIM3-215ENST00000639856 NUDT12Q9BQG2 462 aa16.84■□□□□ 0.29
TRIM3-215ENST00000639856 ADGRG1Q9Y653 693 aa16.84■□□□□ 0.29
TRIM3-215ENST00000639856 LGALS16A8MUM7 142 aa16.84■□□□□ 0.29
TRIM3-215ENST00000639856 CFBP00751 764 aa16.84■□□□□ 0.29
TRIM3-215ENST00000639856 USP11P51784 963 aa16.84■□□□□ 0.29
TRIM3-215ENST00000639856 GNG11P61952 73 aa16.84■□□□□ 0.29
TRIM3-215ENST00000639856 CNNM4Q6P4Q7 775 aa16.84■□□□□ 0.29
TRIM3-215ENST00000639856 SCYL3Q8IZE3 742 aa16.84■□□□□ 0.29
TRIM3-215ENST00000639856 LARP4BQ92615 738 aaKnown RBP16.84■□□□□ 0.29
TRIM3-215ENST00000639856 CDK5RAP3Q96JB5 506 aa16.84■□□□□ 0.29
TRIM3-215ENST00000639856 EMILIN3Q9NT22 766 aa16.84■□□□□ 0.29
TRIM3-215ENST00000639856 ABHD10Q9NUJ1 306 aa16.84■□□□□ 0.29
TRIM3-215ENST00000639856 MAGEC2Q9UBF1 373 aaPredicted RBP16.84■□□□□ 0.29
TRIM3-215ENST00000639856 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.84■□□□□ 0.29
TRIM3-215ENST00000639856 ZNF112Q9UJU3 913 aa16.84■□□□□ 0.29
TRIM3-215ENST00000639856 V9GYY5 206 aaPredicted RBP16.84■□□□□ 0.29
TRIM3-215ENST00000639856 WDR46O15213 610 aaKnown RBP16.83■□□□□ 0.28
TRIM3-215ENST00000639856 VCAM1P19320 739 aa16.83■□□□□ 0.28
TRIM3-215ENST00000639856 SREBF1P36956 1147 aa16.83■□□□□ 0.28
TRIM3-215ENST00000639856 SPP2Q13103 211 aa16.83■□□□□ 0.28
TRIM3-215ENST00000639856 LDHDQ86WU2 507 aa16.83■□□□□ 0.28
TRIM3-215ENST00000639856 CSGALNACT2Q8N6G5 542 aa16.83■□□□□ 0.28
TRIM3-215ENST00000639856 LPAR1Q92633 364 aa16.83■□□□□ 0.28
TRIM3-215ENST00000639856 AGBL1Q96MI9 1066 aa16.83■□□□□ 0.28
TRIM3-215ENST00000639856 MRPL44Q9H9J2 332 aaKnown RBP16.83■□□□□ 0.28
TRIM3-215ENST00000639856 ZNF536O15090 1300 aa16.82■□□□□ 0.28
TRIM3-215ENST00000639856 A0A1W2PQC6 194 aa16.82■□□□□ 0.28
TRIM3-215ENST00000639856 FAM86B1E9PN63 330 aa16.82■□□□□ 0.28
TRIM3-215ENST00000639856 PIK3CDO00329 1044 aa16.82■□□□□ 0.28
TRIM3-215ENST00000639856 URI1O94763 535 aaPredicted RBP16.82■□□□□ 0.28
TRIM3-215ENST00000639856 FAM86B2P0C5J1 330 aa16.82■□□□□ 0.28
TRIM3-215ENST00000639856 FCER1AP12319 257 aa16.82■□□□□ 0.28
TRIM3-215ENST00000639856 PRKG1Q13976 671 aa16.82■□□□□ 0.28
TRIM3-215ENST00000639856 MCM6Q14566 821 aa16.82■□□□□ 0.28
TRIM3-215ENST00000639856 PRR16Q569H4 304 aa16.82■□□□□ 0.28
TRIM3-215ENST00000639856 KRT79Q5XKE5 535 aa16.82■□□□□ 0.28
TRIM3-215ENST00000639856 TMTC1Q8IUR5 882 aa16.82■□□□□ 0.28
TRIM3-215ENST00000639856 MB21D1Q8N884 522 aa16.82■□□□□ 0.28
TRIM3-215ENST00000639856 ZNF507Q8TCN5 953 aa16.82■□□□□ 0.28
TRIM3-215ENST00000639856 SNX29Q8TEQ0 813 aa16.82■□□□□ 0.28
TRIM3-215ENST00000639856 WDR24Q96S15 920 aa16.82■□□□□ 0.28
TRIM3-215ENST00000639856 ARID3AQ99856 593 aa16.82■□□□□ 0.28
TRIM3-215ENST00000639856 SLF1Q9BQI6 1058 aa16.82■□□□□ 0.28
TRIM3-215ENST00000639856 TANGO6Q9C0B7 1094 aa16.82■□□□□ 0.28
TRIM3-215ENST00000639856 GINM1Q9NU53 330 aa16.82■□□□□ 0.28
TRIM3-215ENST00000639856 PHIPQ8WWQ0 1821 aa16.82■□□□□ 0.28
TRIM3-215ENST00000639856 CYP3A7-CYP3A51PA0A087WV96 503 aa16.82■□□□□ 0.28
TRIM3-215ENST00000639856 PVALEFA0A1B0GWK0 134 aa16.82■□□□□ 0.28
TRIM3-215ENST00000639856 MYMKA6NI61 221 aa16.82■□□□□ 0.28
TRIM3-215ENST00000639856 RNF225M0QZC1 329 aaPredicted RBP16.82■□□□□ 0.28
TRIM3-215ENST00000639856 MARCH6O60337 910 aa16.82■□□□□ 0.28
TRIM3-215ENST00000639856 FOSP01100 380 aaPredicted RBP16.82■□□□□ 0.28
TRIM3-215ENST00000639856 PTPRAP18433 802 aa16.82■□□□□ 0.28
TRIM3-215ENST00000639856 CYP3A7P24462 503 aa16.82■□□□□ 0.28
TRIM3-215ENST00000639856 CASQ1P31415 396 aa16.82■□□□□ 0.28
TRIM3-215ENST00000639856 ELF2Q15723 593 aa16.82■□□□□ 0.28
TRIM3-215ENST00000639856 ANKRD40Q6AI12 368 aa16.82■□□□□ 0.28
TRIM3-215ENST00000639856 KIAA0895Q8NCT3 520 aa16.82■□□□□ 0.28
TRIM3-215ENST00000639856 MBOAT7Q96N66 472 aa16.82■□□□□ 0.28
TRIM3-215ENST00000639856 NAP1L4Q99733 375 aaKnown RBP16.82■□□□□ 0.28
TRIM3-215ENST00000639856 KCNMB3Q9NPA1 279 aa16.82■□□□□ 0.28
TRIM3-215ENST00000639856 KRT9P35527 623 aa16.81■□□□□ 0.28
TRIM3-215ENST00000639856 DNM2P50570 870 aa16.81■□□□□ 0.28
TRIM3-215ENST00000639856 C9orf131Q5VYM1 1079 aa16.81■□□□□ 0.28
TRIM3-215ENST00000639856 UNC13DQ70J99 1090 aa16.81■□□□□ 0.28
TRIM3-215ENST00000639856 CYP2W1Q8TAV3 490 aa16.81■□□□□ 0.28
TRIM3-215ENST00000639856 RAD54LQ92698 747 aa16.81■□□□□ 0.28
TRIM3-215ENST00000639856 LENG9Q96B70 501 aa16.81■□□□□ 0.28
TRIM3-215ENST00000639856 PKNOX2Q96KN3 472 aa16.81■□□□□ 0.28
TRIM3-215ENST00000639856 PARP14Q460N5 1801 aa16.81■□□□□ 0.28
TRIM3-215ENST00000639856 FLOT1O75955 427 aa16.81■□□□□ 0.28
TRIM3-215ENST00000639856 ECM1Q16610 540 aa16.81■□□□□ 0.28
TRIM3-215ENST00000639856 TMEM119Q4V9L6 283 aa16.81■□□□□ 0.28
TRIM3-215ENST00000639856 CYP26C1Q6V0L0 522 aa16.81■□□□□ 0.28
TRIM3-215ENST00000639856 FAM114A1Q8IWE2 563 aa16.81■□□□□ 0.28
TRIM3-215ENST00000639856 PRPF38AQ8NAV1 312 aaKnown RBP16.81■□□□□ 0.28
TRIM3-215ENST00000639856 KLRG1Q96E93 195 aa16.81■□□□□ 0.28
TRIM3-215ENST00000639856 TUBGCP2Q9BSJ2 902 aa16.81■□□□□ 0.28
TRIM3-215ENST00000639856 PICK1Q9NRD5 415 aa16.81■□□□□ 0.28
TRIM3-215ENST00000639856 CCPG1Q9ULG6 757 aa16.81■□□□□ 0.28
TRIM3-215ENST00000639856 PCDHA12Q9UN75 941 aa16.81■□□□□ 0.28
TRIM3-215ENST00000639856 GCOM1H8Y6P7 765 aaPredicted RBP16.8■□□□□ 0.28
TRIM3-215ENST00000639856 ICAM1P05362 532 aa16.8■□□□□ 0.28
TRIM3-215ENST00000639856 POLR2MP0CAP2 368 aa16.8■□□□□ 0.28
TRIM3-215ENST00000639856 ERVK-24P63145 666 aa16.8■□□□□ 0.28
TRIM3-215ENST00000639856 UBXN2AP68543 259 aa16.8■□□□□ 0.28
TRIM3-215ENST00000639856 MCTP2Q6DN12 878 aa16.8■□□□□ 0.28
TRIM3-215ENST00000639856 MOXD1Q6UVY6 613 aa16.8■□□□□ 0.28
TRIM3-215ENST00000639856 LRRN4CLQ8ND94 238 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms