RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 PRAMEF18Q5VWM3 479 aa5.93□□□□□ -1.46
CCDC7-211ENST00000638889 RCBTB1Q8NDN9 531 aa5.93□□□□□ -1.46
CCDC7-211ENST00000638889 DVL3Q92997 716 aaPredicted RBP5.93□□□□□ -1.46
CCDC7-211ENST00000638889 TOE1Q96GM8 510 aaKnown RBP5.93□□□□□ -1.46
CCDC7-211ENST00000638889 WRNIP1Q96S55 665 aa5.93□□□□□ -1.46
CCDC7-211ENST00000638889 CCSER2Q9H7U1 834 aa5.93□□□□□ -1.46
CCDC7-211ENST00000638889 ACTR10Q9NZ32 417 aa5.93□□□□□ -1.46
CCDC7-211ENST00000638889 DTLQ9NZJ0 730 aa5.93□□□□□ -1.46
CCDC7-211ENST00000638889 LRP2BPQ9P2M1 347 aa5.93□□□□□ -1.46
CCDC7-211ENST00000638889 LAMTOR5O43504 91 aa5.92□□□□□ -1.46
CCDC7-211ENST00000638889 TADA3O75528 432 aa5.92□□□□□ -1.46
CCDC7-211ENST00000638889 ECI1P42126 302 aa5.92□□□□□ -1.46
CCDC7-211ENST00000638889 C6orf15Q6UXA7 325 aaPredicted RBP5.92□□□□□ -1.46
CCDC7-211ENST00000638889 FAM178BQ8IXR5 827 aa5.92□□□□□ -1.46
CCDC7-211ENST00000638889 CLIC6Q96NY7 704 aa5.92□□□□□ -1.46
CCDC7-211ENST00000638889 LGR4Q9BXB1 951 aa5.92□□□□□ -1.46
CCDC7-211ENST00000638889 TCRBV5S2A0A599 114 aa5.91□□□□□ -1.46
CCDC7-211ENST00000638889 SMAD7O15105 426 aaKnown RBP5.91□□□□□ -1.46
CCDC7-211ENST00000638889 TBX1O43435 398 aa5.91□□□□□ -1.46
CCDC7-211ENST00000638889 SUSD5O60279 629 aa5.91□□□□□ -1.46
CCDC7-211ENST00000638889 B4GALT3O60512 393 aa5.91□□□□□ -1.46
CCDC7-211ENST00000638889 CYP1A1P04798 512 aaPredicted RBP5.91□□□□□ -1.46
CCDC7-211ENST00000638889 IL13P35225 146 aa5.91□□□□□ -1.46
CCDC7-211ENST00000638889 STEAP3Q658P3 488 aa5.91□□□□□ -1.46
CCDC7-211ENST00000638889 PPIL6Q8IXY8 311 aa5.91□□□□□ -1.46
CCDC7-211ENST00000638889 PHOSPHO1Q8TCT1 267 aa5.91□□□□□ -1.46
CCDC7-211ENST00000638889 YTHDC1Q96MU7 727 aaKnown RBP5.91□□□□□ -1.46
CCDC7-211ENST00000638889 TMEM209Q96SK2 561 aa5.91□□□□□ -1.46
CCDC7-211ENST00000638889 TMEM168Q9H0V1 697 aa5.91□□□□□ -1.46
CCDC7-211ENST00000638889 L2HGDHQ9H9P8 463 aa5.91□□□□□ -1.46
CCDC7-211ENST00000638889 HSPBP1Q9NZL4 362 aa5.91□□□□□ -1.46
CCDC7-211ENST00000638889 PCDHB4Q9Y5E5 795 aa5.91□□□□□ -1.46
CCDC7-211ENST00000638889 MAFKO60675 156 aa5.9□□□□□ -1.46
CCDC7-211ENST00000638889 DGKIO75912 1065 aa5.9□□□□□ -1.46
CCDC7-211ENST00000638889 KCNJ6P48051 423 aa5.9□□□□□ -1.46
CCDC7-211ENST00000638889 GFRA1P56159 465 aa5.9□□□□□ -1.46
CCDC7-211ENST00000638889 CYP4F22Q6NT55 531 aa5.9□□□□□ -1.46
CCDC7-211ENST00000638889 PKN3Q6P5Z2 889 aa5.9□□□□□ -1.46
CCDC7-211ENST00000638889 TEPPQ6URK8 271 aa5.9□□□□□ -1.46
CCDC7-211ENST00000638889 VPS37DQ86XT2 251 aa5.9□□□□□ -1.46
CCDC7-211ENST00000638889 ARRDC4Q8NCT1 418 aa5.9□□□□□ -1.46
CCDC7-211ENST00000638889 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.9□□□□□ -1.46
CCDC7-211ENST00000638889 MBD6Q96DN6 1003 aa5.9□□□□□ -1.46
CCDC7-211ENST00000638889 EPN3Q9H201 632 aa5.9□□□□□ -1.46
CCDC7-211ENST00000638889 EPB41L1Q9H4G0 881 aa5.9□□□□□ -1.46
CCDC7-211ENST00000638889 CAPN10Q9HC96 672 aa5.9□□□□□ -1.46
CCDC7-211ENST00000638889 PPP4R1LQ9P1A2 415 aa5.9□□□□□ -1.46
CCDC7-211ENST00000638889 KIAA1522Q9P206 1035 aaPredicted RBP5.9□□□□□ -1.46
CCDC7-211ENST00000638889 PRKAG3Q9UGI9 489 aa5.9□□□□□ -1.46
CCDC7-211ENST00000638889 FBXL7Q9UJT9 491 aa5.9□□□□□ -1.46
CCDC7-211ENST00000638889 PCDHA2Q9Y5H9 948 aa5.9□□□□□ -1.46
CCDC7-211ENST00000638889 NPFFR2Q9Y5X5 522 aa5.9□□□□□ -1.46
CCDC7-211ENST00000638889 AKAP8O43823 692 aaKnown RBP5.89□□□□□ -1.47
CCDC7-211ENST00000638889 SSBP05455 408 aaKnown RBP eCLIP5.89□□□□□ -1.47
CCDC7-211ENST00000638889 FXNQ16595 210 aa5.89□□□□□ -1.47
CCDC7-211ENST00000638889 PRSS53Q2L4Q9 553 aa5.89□□□□□ -1.47
CCDC7-211ENST00000638889 LARP1BQ659C4 914 aaKnown RBP5.89□□□□□ -1.47
CCDC7-211ENST00000638889 LIMS2Q7Z4I7 341 aa5.89□□□□□ -1.47
CCDC7-211ENST00000638889 C1orf159Q96HA4 380 aa5.89□□□□□ -1.47
CCDC7-211ENST00000638889 CHAMP1Q96JM3 812 aa5.89□□□□□ -1.47
CCDC7-211ENST00000638889 CDK5RAP1Q96SZ6 601 aaKnown RBP5.89□□□□□ -1.47
CCDC7-211ENST00000638889 SMOC1Q9H4F8 434 aa5.89□□□□□ -1.47
CCDC7-211ENST00000638889 CLDND1Q9NY35 253 aa5.89□□□□□ -1.47
CCDC7-211ENST00000638889 TSC22D4Q9Y3Q8 395 aa5.89□□□□□ -1.47
CCDC7-211ENST00000638889 DDAH1O94760 285 aa5.88□□□□□ -1.47
CCDC7-211ENST00000638889 LRG1P02750 347 aa5.88□□□□□ -1.47
CCDC7-211ENST00000638889 CAPNS1P04632 268 aa5.88□□□□□ -1.47
CCDC7-211ENST00000638889 EPHB4P54760 987 aa5.88□□□□□ -1.47
CCDC7-211ENST00000638889 MLLT6P55198 1093 aaPredicted RBP5.88□□□□□ -1.47
CCDC7-211ENST00000638889 SF1Q15637 639 aaKnown RBP5.88□□□□□ -1.47
CCDC7-211ENST00000638889 SLC35F1Q5T1Q4 408 aa5.88□□□□□ -1.47
CCDC7-211ENST00000638889 TRIM48Q8IWZ4 208 aa5.88□□□□□ -1.47
CCDC7-211ENST00000638889 KLHL36Q8N4N3 616 aa5.88□□□□□ -1.47
CCDC7-211ENST00000638889 TMEM145Q8NBT3 493 aa5.88□□□□□ -1.47
CCDC7-211ENST00000638889 KISS1RQ969F8 398 aaPredicted RBP5.88□□□□□ -1.47
CCDC7-211ENST00000638889 MYOTQ9UBF9 498 aa5.88□□□□□ -1.47
CCDC7-211ENST00000638889 SRRDQ9UH36 339 aa5.88□□□□□ -1.47
CCDC7-211ENST00000638889 ST6GALNAC2Q9UJ37 374 aa5.88□□□□□ -1.47
CCDC7-211ENST00000638889 NPEPPSL1A6NEC2 478 aa5.87□□□□□ -1.47
CCDC7-211ENST00000638889 B2RBV5 119 aa5.87□□□□□ -1.47
CCDC7-211ENST00000638889 LCP1P13796 627 aa5.87□□□□□ -1.47
CCDC7-211ENST00000638889 PPP2CBP62714 309 aa5.87□□□□□ -1.47
CCDC7-211ENST00000638889 PPP2CAP67775 309 aa5.87□□□□□ -1.47
CCDC7-211ENST00000638889 DENND5AQ6IQ26 1287 aa5.87□□□□□ -1.47
CCDC7-211ENST00000638889 EEPD1Q7L9B9 569 aa5.87□□□□□ -1.47
CCDC7-211ENST00000638889 DNERQ8NFT8 737 aa5.87□□□□□ -1.47
CCDC7-211ENST00000638889 TTLL11Q8NHH1 800 aa5.87□□□□□ -1.47
CCDC7-211ENST00000638889 ZCCHC14Q8WYQ9 949 aaKnown RBP5.87□□□□□ -1.47
CCDC7-211ENST00000638889 ZSWIM3Q96MP5 696 aa5.87□□□□□ -1.47
CCDC7-211ENST00000638889 FTSJ1Q9UET6 329 aa5.87□□□□□ -1.47
CCDC7-211ENST00000638889 MRVI1Q9Y6F6 885 aa5.87□□□□□ -1.47
CCDC7-211ENST00000638889 AGRPO00253 132 aa5.86□□□□□ -1.47
CCDC7-211ENST00000638889 KRIT1O00522 736 aa5.86□□□□□ -1.47
CCDC7-211ENST00000638889 MAP4K2Q12851 820 aa5.86□□□□□ -1.47
CCDC7-211ENST00000638889 MRM1Q6IN84 353 aaKnown RBP5.86□□□□□ -1.47
CCDC7-211ENST00000638889 ARHGEF18Q6ZSZ5 1173 aa5.86□□□□□ -1.47
CCDC7-211ENST00000638889 CIR1Q86X95 450 aaPredicted RBP5.86□□□□□ -1.47
CCDC7-211ENST00000638889 KBTBD2Q8IY47 623 aa5.86□□□□□ -1.47
CCDC7-211ENST00000638889 KCTD13Q8WZ19 329 aa5.86□□□□□ -1.47
CCDC7-211ENST00000638889 CDIP1Q9H305 208 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 2004 ms