RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 LRRC45Q96CN5 670 aa17.16■□□□□ 0.34
CACNA1A-235ENST00000637004 AK8Q96MA6 479 aa17.16■□□□□ 0.34
CACNA1A-235ENST00000637004 TAF1DQ9H5J8 278 aaPredicted RBP17.16■□□□□ 0.34
CACNA1A-235ENST00000637004 DDX20Q9UHI6 824 aaKnown RBP17.16■□□□□ 0.34
CACNA1A-235ENST00000637004 TRAPPC3O43617 180 aa17.15■□□□□ 0.34
CACNA1A-235ENST00000637004 STARD3NLO95772 234 aa17.15■□□□□ 0.34
CACNA1A-235ENST00000637004 FGRP09769 529 aa17.15■□□□□ 0.34
CACNA1A-235ENST00000637004 SLC8A1P32418 973 aa17.15■□□□□ 0.34
CACNA1A-235ENST00000637004 KIF5BP33176 963 aa17.15■□□□□ 0.34
CACNA1A-235ENST00000637004 PRPHP41219 470 aa17.15■□□□□ 0.34
CACNA1A-235ENST00000637004 GFPT1Q06210 699 aaPredicted RBP17.15■□□□□ 0.34
CACNA1A-235ENST00000637004 CACNA2D4Q7Z3S7 1137 aa17.15■□□□□ 0.34
CACNA1A-235ENST00000637004 RBAK-RBAKDNI3L0D1 243 aa17.15■□□□□ 0.34
CACNA1A-235ENST00000637004 GCFC2P16383 781 aaKnown RBP17.15■□□□□ 0.34
CACNA1A-235ENST00000637004 SLC1A4P43007 532 aa17.15■□□□□ 0.34
CACNA1A-235ENST00000637004 BRIP1Q9BX63 1249 aa17.15■□□□□ 0.34
CACNA1A-235ENST00000637004 NUCKS1Q9H1E3 243 aaKnown RBP17.15■□□□□ 0.34
CACNA1A-235ENST00000637004 BCAMP50895 628 aa17.14■□□□□ 0.33
CACNA1A-235ENST00000637004 CUL1Q13616 776 aa17.14■□□□□ 0.33
CACNA1A-235ENST00000637004 CENPPQ6IPU0 288 aa17.14■□□□□ 0.33
CACNA1A-235ENST00000637004 PDXDC1Q6P996 788 aa17.14■□□□□ 0.33
CACNA1A-235ENST00000637004 BAP1Q92560 729 aa17.14■□□□□ 0.33
CACNA1A-235ENST00000637004 ISCUQ9H1K1 167 aa17.14■□□□□ 0.33
CACNA1A-235ENST00000637004 MYH10P35580 1976 aa17.14■□□□□ 0.33
CACNA1A-235ENST00000637004 PALMO75781 387 aa17.14■□□□□ 0.33
CACNA1A-235ENST00000637004 PLCG1P19174 1290 aa17.14■□□□□ 0.33
CACNA1A-235ENST00000637004 HLTFQ14527 1009 aaKnown RBP eCLIP17.14■□□□□ 0.33
CACNA1A-235ENST00000637004 TDRD12Q587J7 1177 aaKnown RBP17.14■□□□□ 0.33
CACNA1A-235ENST00000637004 ANKRD20A8PQ5CZ79 823 aa17.14■□□□□ 0.33
CACNA1A-235ENST00000637004 CABP7Q86V35 215 aa17.14■□□□□ 0.33
CACNA1A-235ENST00000637004 CACNA2D3Q8IZS8 1091 aa17.14■□□□□ 0.33
CACNA1A-235ENST00000637004 TMEM60Q9H2L4 133 aa17.14■□□□□ 0.33
CACNA1A-235ENST00000637004 SLC12A6Q9UHW9 1150 aa17.14■□□□□ 0.33
CACNA1A-235ENST00000637004 ARAP2Q8WZ64 1704 aa17.13■□□□□ 0.33
CACNA1A-235ENST00000637004 FAM205AQ6ZU69 1335 aa17.13■□□□□ 0.33
CACNA1A-235ENST00000637004 ADAMTS3O15072 1205 aa17.13■□□□□ 0.33
CACNA1A-235ENST00000637004 SLC9C1Q4G0N8 1177 aa17.13■□□□□ 0.33
CACNA1A-235ENST00000637004 DNAJC10Q8IXB1 793 aa17.13■□□□□ 0.33
CACNA1A-235ENST00000637004 INPP4AQ96PE3 977 aaPredicted RBP17.13■□□□□ 0.33
CACNA1A-235ENST00000637004 OSBPL7Q9BZF2 842 aa17.13■□□□□ 0.33
CACNA1A-235ENST00000637004 DUOX1Q9NRD9 1551 aa17.13■□□□□ 0.33
CACNA1A-235ENST00000637004 PAPPAQ13219 1627 aa17.13■□□□□ 0.33
CACNA1A-235ENST00000637004 SMIM22K7EJ46 135 aa17.13■□□□□ 0.33
CACNA1A-235ENST00000637004 SNAP23O00161 211 aa17.13■□□□□ 0.33
CACNA1A-235ENST00000637004 FCER1AP12319 257 aa17.13■□□□□ 0.33
CACNA1A-235ENST00000637004 CRYMQ14894 314 aa17.13■□□□□ 0.33
CACNA1A-235ENST00000637004 NAB2Q15742 525 aa17.13■□□□□ 0.33
CACNA1A-235ENST00000637004 SEMA6BQ9H3T3 888 aa17.13■□□□□ 0.33
CACNA1A-235ENST00000637004 RAD51CO43502 376 aa17.12■□□□□ 0.33
CACNA1A-235ENST00000637004 MYBP10242 640 aa17.12■□□□□ 0.33
CACNA1A-235ENST00000637004 VEGFAP15692 232 aaPredicted RBP17.12■□□□□ 0.33
CACNA1A-235ENST00000637004 HSD17B3P37058 310 aa17.12■□□□□ 0.33
CACNA1A-235ENST00000637004 NBPF9Q3BBW0 867 aa17.12■□□□□ 0.33
CACNA1A-235ENST00000637004 LACTB2Q53H82 288 aaPredicted RBP17.12■□□□□ 0.33
CACNA1A-235ENST00000637004 ADGRA1Q86SQ6 560 aa17.12■□□□□ 0.33
CACNA1A-235ENST00000637004 SEC16BQ96JE7 1060 aa17.12■□□□□ 0.33
CACNA1A-235ENST00000637004 A0A1B0GUA9 196 aa17.12■□□□□ 0.33
CACNA1A-235ENST00000637004 C5orf60A6NFR6 353 aa17.12■□□□□ 0.33
CACNA1A-235ENST00000637004 ODF2Q5BJF6 829 aa17.12■□□□□ 0.33
CACNA1A-235ENST00000637004 MEI1Q5TIA1 1274 aa17.12■□□□□ 0.33
CACNA1A-235ENST00000637004 USP38Q8NB14 1042 aa17.12■□□□□ 0.33
CACNA1A-235ENST00000637004 PCDHGC5Q9Y5F6 944 aa17.12■□□□□ 0.33
CACNA1A-235ENST00000637004 CYP2D7A0A087X1C5 515 aa17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 DNM1LO00429 736 aa17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 FTCDO95954 541 aa17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 PAEPP09466 180 aa17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 SCP2P22307 547 aa17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 CTNNA1P35221 906 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 XRCC4Q13426 336 aa17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 GKAP1Q5VSY0 366 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 GALNT17Q6IS24 598 aa17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 CEP120Q8N960 986 aa17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 TAF4BQ92750 862 aa17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 SYN2Q92777 582 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 UPF1Q92900 1129 aaKnown RBP eCLIP17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 SCLT1Q96NL6 688 aa17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 RIOK1Q9BRS2 568 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 SHANK3Q9BYB0 1731 aa17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 LRP5O75197 1615 aa17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 CES2O00748 559 aa17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 NKRFO15226 690 aaKnown RBP eCLIP17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 SERPING1P05155 500 aa17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 ERCC3P19447 782 aa17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 DNA2P51530 1060 aa17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 ATP2B2Q01814 1243 aa17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 MTMR3Q13615 1198 aa17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 AGBL2Q5U5Z8 902 aa17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 HGSNATQ68CP4 663 aa17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 FAM43BQ6ZT52 329 aaPredicted RBP17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 TEX11Q8IYF3 940 aa17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 RASGRP4Q8TDF6 673 aa17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 LRRC15Q8TF66 581 aa17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 HAUS2Q9NVX0 235 aa17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 ABCF2Q9UG63 623 aa17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 TPX2Q9ULW0 747 aaKnown RBP17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 LEMD3Q9Y2U8 911 aa17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 FLT1P17948 1338 aa17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 ORC4O43929 436 aa17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 SCTRP47872 440 aa17.11■□□□□ 0.33
CACNA1A-235ENST00000637004 PPP2R2AP63151 447 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms