RNA–Protein interactions for RNA: ENST00000636602.1

CLN5-212, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 3

Gene CLN5, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-212ENST00000636602 FKTNO75072 461 aa6.02□□□□□ -1.45
CLN5-212ENST00000636602 PRKCAP17252 672 aa6.02□□□□□ -1.45
CLN5-212ENST00000636602 SOX5P35711 763 aa6.02□□□□□ -1.45
CLN5-212ENST00000636602 STAT3P40763 770 aa6.02□□□□□ -1.45
CLN5-212ENST00000636602 CYP4F8P98187 520 aa6.02□□□□□ -1.45
CLN5-212ENST00000636602 PLEKHN1Q494U1 663 aaPredicted RBP6.02□□□□□ -1.45
CLN5-212ENST00000636602 CRB2Q5IJ48 1285 aa6.02□□□□□ -1.45
CLN5-212ENST00000636602 SAPCD2Q86UD0 394 aa6.02□□□□□ -1.45
CLN5-212ENST00000636602 Q8N1X5 172 aa6.02□□□□□ -1.45
CLN5-212ENST00000636602 ARHGEF39Q8N4T4 335 aa6.02□□□□□ -1.45
CLN5-212ENST00000636602 ZNF655Q8N720 491 aaPredicted RBP6.02□□□□□ -1.45
CLN5-212ENST00000636602 FCRL2Q96LA5 508 aaPredicted RBP6.02□□□□□ -1.45
CLN5-212ENST00000636602 C8orf49Q96NF6 230 aa6.02□□□□□ -1.45
CLN5-212ENST00000636602 SAMD11Q96NU1 681 aa6.02□□□□□ -1.45
CLN5-212ENST00000636602 NOL6Q9H6R4 1146 aaKnown RBP6.02□□□□□ -1.45
CLN5-212ENST00000636602 CAAP1Q9H8G2 361 aa6.02□□□□□ -1.45
CLN5-212ENST00000636602 SFMBT1Q9UHJ3 866 aa6.02□□□□□ -1.45
CLN5-212ENST00000636602 FHOD1Q9Y613 1164 aa6.02□□□□□ -1.45
CLN5-212ENST00000636602 A0A087WZG4 1122 aa6.01□□□□□ -1.45
CLN5-212ENST00000636602 A0A087X0B3 334 aa6.01□□□□□ -1.45
CLN5-212ENST00000636602 ACVRL1P37023 503 aa6.01□□□□□ -1.45
CLN5-212ENST00000636602 KCNJ6P48051 423 aa6.01□□□□□ -1.45
CLN5-212ENST00000636602 ZNF200P98182 395 aaPredicted RBP6.01□□□□□ -1.45
CLN5-212ENST00000636602 SNW1Q13573 536 aaKnown RBP6.01□□□□□ -1.45
CLN5-212ENST00000636602 PLEKHG6Q3KR16 790 aa6.01□□□□□ -1.45
CLN5-212ENST00000636602 CNNM4Q6P4Q7 775 aa6.01□□□□□ -1.45
CLN5-212ENST00000636602 ZC3H14Q6PJT7 736 aaKnown RBP6.01□□□□□ -1.45
CLN5-212ENST00000636602 ZFPM1Q8IX07 1006 aa6.01□□□□□ -1.45
CLN5-212ENST00000636602 FIBCD1Q8N539 461 aa6.01□□□□□ -1.45
CLN5-212ENST00000636602 UBR7Q8N806 425 aa6.01□□□□□ -1.45
CLN5-212ENST00000636602 ZNF526Q8TF50 670 aaPredicted RBP6.01□□□□□ -1.45
CLN5-212ENST00000636602 LOXL4Q96JB6 756 aa6.01□□□□□ -1.45
CLN5-212ENST00000636602 ZDHHC15Q96MV8 337 aa6.01□□□□□ -1.45
CLN5-212ENST00000636602 DSCC1Q9BVC3 393 aa6.01□□□□□ -1.45
CLN5-212ENST00000636602 PRDM14Q9GZV8 571 aa6.01□□□□□ -1.45
CLN5-212ENST00000636602 NDOR1Q9UHB4 597 aa6.01□□□□□ -1.45
CLN5-212ENST00000636602 ACSL6Q9UKU0 697 aa6.01□□□□□ -1.45
CLN5-212ENST00000636602 GPR55Q9Y2T6 319 aaPredicted RBP6.01□□□□□ -1.45
CLN5-212ENST00000636602 BLACEA4D250 179 aa6□□□□□ -1.45
CLN5-212ENST00000636602 CAPNS1P04632 268 aa6□□□□□ -1.45
CLN5-212ENST00000636602 SYPP08247 313 aa6□□□□□ -1.45
CLN5-212ENST00000636602 FBLN1P23142 703 aa6□□□□□ -1.45
CLN5-212ENST00000636602 MAPKAPK2P49137 400 aa6□□□□□ -1.45
CLN5-212ENST00000636602 HTRA3P83110 453 aa6□□□□□ -1.45
CLN5-212ENST00000636602 FOXO4P98177 505 aa6□□□□□ -1.45
CLN5-212ENST00000636602 TARBP2Q15633 366 aaKnown RBP6□□□□□ -1.45
CLN5-212ENST00000636602 SF1Q15637 639 aaKnown RBP6□□□□□ -1.45
CLN5-212ENST00000636602 GTF2IRD2BQ6EKJ0 949 aa6□□□□□ -1.45
CLN5-212ENST00000636602 GTF2IRD2Q86UP8 949 aa6□□□□□ -1.45
CLN5-212ENST00000636602 LRRTM3Q86VH5 581 aa6□□□□□ -1.45
CLN5-212ENST00000636602 JAMLQ86YT9 394 aa6□□□□□ -1.45
CLN5-212ENST00000636602 STAG1Q8WVM7 1258 aa6□□□□□ -1.45
CLN5-212ENST00000636602 KCTD13Q8WZ19 329 aa6□□□□□ -1.45
CLN5-212ENST00000636602 GFOD1Q9NXC2 390 aa6□□□□□ -1.45
CLN5-212ENST00000636602 MAGEC2Q9UBF1 373 aaPredicted RBP6□□□□□ -1.45
CLN5-212ENST00000636602 DIS3Q9Y2L1 958 aaKnown RBP6□□□□□ -1.45
CLN5-212ENST00000636602 ATP8A1Q9Y2Q0 1164 aa6□□□□□ -1.45
CLN5-212ENST00000636602 PMF1-BGLAPU3KQ54 211 aa6□□□□□ -1.45
CLN5-212ENST00000636602 MEIS1O00470 390 aa5.99□□□□□ -1.45
CLN5-212ENST00000636602 DLX3O60479 287 aa5.99□□□□□ -1.45
CLN5-212ENST00000636602 S100BP04271 92 aaPredicted RBP5.99□□□□□ -1.45
CLN5-212ENST00000636602 SNRPB2P08579 225 aaKnown RBP5.99□□□□□ -1.45
CLN5-212ENST00000636602 SDSP20132 328 aa5.99□□□□□ -1.45
CLN5-212ENST00000636602 GABREP78334 506 aa5.99□□□□□ -1.45
CLN5-212ENST00000636602 DLX2Q07687 328 aaPredicted RBP5.99□□□□□ -1.45
CLN5-212ENST00000636602 NR1I3Q14994 352 aa5.99□□□□□ -1.45
CLN5-212ENST00000636602 SLCO6A1Q86UG4 719 aa5.99□□□□□ -1.45
CLN5-212ENST00000636602 PRPF38AQ8NAV1 312 aaKnown RBP5.99□□□□□ -1.45
CLN5-212ENST00000636602 NUP43Q8NFH3 380 aa5.99□□□□□ -1.45
CLN5-212ENST00000636602 TARS2Q9BW92 718 aaKnown RBP5.99□□□□□ -1.45
CLN5-212ENST00000636602 FAM126AQ9BYI3 521 aaPredicted RBP5.99□□□□□ -1.45
CLN5-212ENST00000636602 NKX2-4Q9H2Z4 354 aa5.99□□□□□ -1.45
CLN5-212ENST00000636602 HOMER2Q9NSB8 354 aa5.99□□□□□ -1.45
CLN5-212ENST00000636602 TYW1Q9NV66 732 aaKnown RBP5.99□□□□□ -1.45
CLN5-212ENST00000636602 INTS7Q9NVH2 962 aaKnown RBP5.99□□□□□ -1.45
CLN5-212ENST00000636602 MAPRE3Q9UPY8 281 aa5.99□□□□□ -1.45
CLN5-212ENST00000636602 SF3B6Q9Y3B4 125 aaKnown RBP5.99□□□□□ -1.45
CLN5-212ENST00000636602 GSG1L2A8MUP6 293 aa5.98□□□□□ -1.45
CLN5-212ENST00000636602 PDGFRBP09619 1106 aa5.98□□□□□ -1.45
CLN5-212ENST00000636602 C6orf222P0C671 652 aaPredicted RBP5.98□□□□□ -1.45
CLN5-212ENST00000636602 ECI1P42126 302 aa5.98□□□□□ -1.45
CLN5-212ENST00000636602 CDKN1CP49918 316 aaPredicted RBP5.98□□□□□ -1.45
CLN5-212ENST00000636602 GFRA1P56159 465 aa5.98□□□□□ -1.45
CLN5-212ENST00000636602 GJA9P57773 515 aa5.98□□□□□ -1.45
CLN5-212ENST00000636602 EVA1CP58658 441 aa5.98□□□□□ -1.45
CLN5-212ENST00000636602 AMPD2Q01433 879 aa5.98□□□□□ -1.45
CLN5-212ENST00000636602 GRB10Q13322 594 aa5.98□□□□□ -1.45
CLN5-212ENST00000636602 TRIM61Q5EBN2 209 aa5.98□□□□□ -1.45
CLN5-212ENST00000636602 BRAPQ7Z569 592 aa5.98□□□□□ -1.45
CLN5-212ENST00000636602 TMC3Q7Z5M5 1100 aa5.98□□□□□ -1.45
CLN5-212ENST00000636602 RNF180Q86T96 592 aa5.98□□□□□ -1.45
CLN5-212ENST00000636602 SLC7A14Q8TBB6 771 aa5.98□□□□□ -1.45
CLN5-212ENST00000636602 CCDC140Q96MF4 163 aa5.98□□□□□ -1.45
CLN5-212ENST00000636602 CEP89Q96ST8 783 aa5.98□□□□□ -1.45
CLN5-212ENST00000636602 SLC52A2Q9HAB3 445 aa5.98□□□□□ -1.45
CLN5-212ENST00000636602 PRR13Q9NZ81 148 aa5.98□□□□□ -1.45
CLN5-212ENST00000636602 MCM8Q9UJA3 840 aa5.98□□□□□ -1.45
CLN5-212ENST00000636602 A0A1W2PQ45 241 aaPredicted RBP5.97□□□□□ -1.45
CLN5-212ENST00000636602 A0A1W2PQY0 241 aa5.97□□□□□ -1.45
CLN5-212ENST00000636602 KCNQ2O43526 872 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms