RNA–Protein interactions for RNA: ENST00000636046.1

CDKL5-210, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 100 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-210ENST00000636046 USP26Q9BXU7 913 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 NIFKQ9BYG3 293 aaKnown RBP-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 LACRTQ9GZZ8 138 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 SEC61A2Q9H9S3 476 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 SEMA4GQ9NTN9 838 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 ZNF229Q9UJW7 825 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 ADAMTS5Q9UNA0 930 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 GIT1Q9Y2X7 761 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 SLC6A5Q9Y345 797 aa-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 SETXQ7Z333 2677 aaKnown RBP-0.58□□□□□ -2.5
CDKL5-210ENST00000636046 APCP25054 2843 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 SETD2Q9BYW2 2564 aaPredicted RBP-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 A0A1W2PPI3 338 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 A0A1W2PQ67 120 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 A0A1W2PRX2 142 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 KRTAP23-1A1A580 65 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 MEIOCA2RUB1 952 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 RSPH10B2B2RC85 870 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 ERVV-1B6SEH8 477 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 H0Y858 1186 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 J3QKU1 62 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 J3QW42 95 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 ARVCFO00192 962 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 DDX3XO00571 662 aaKnown RBP eCLIP-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 DPYSL4O14531 572 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 RIOK3O14730 519 aaKnown RBP-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 HNRNPDLO14979 420 aaKnown RBP-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 ZG16O60844 167 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 DLGAP3O95886 979 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 ESR1P03372 595 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 CYP1A1P04798 512 aaPredicted RBP-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 CD48P09326 243 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 RSPH10BP0C881 870 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 ZCCHC18P0CG32 403 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 PNLIPP16233 465 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 SP100P23497 879 aaPredicted RBP-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 COL8A2P25067 703 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 FASP25445 335 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 PDE4AP27815 886 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 ITPKBP27987 946 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 ARID4AP29374 1257 aaPredicted RBP-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 MC3RP41968 323 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 MMP13P45452 471 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 AVPR1BP47901 424 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 NPEPPSP55786 919 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 PIP4K2BP78356 416 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 FAM189BP81408 668 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 GUCA2AQ02747 115 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 ZFP36L1Q07352 338 aaKnown RBP-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 FUT7Q11130 342 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 CRHR2Q13324 411 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 PEX6Q13608 980 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 SMAD2Q15796 467 aaKnown RBP-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 BMT2Q1RMZ1 405 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 KRTAP19-8Q3LI54 63 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 SEZ6Q53EL9 994 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 HLA-DQA1Q5Y7H0 255 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 MAP1SQ66K74 1059 aaPredicted RBP-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 CC2D2BQ6DHV5 1058 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 PKN3Q6P5Z2 889 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 LVRNQ6Q4G3 990 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 SRGAP1Q7Z6B7 1085 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 THAP5Q7Z6K1 395 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 B3GNT8Q7Z7M8 397 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 DAAM2Q86T65 1068 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 TAX1BP1Q86VP1 789 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 CREG2Q8IUH2 290 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 ZNF561Q8N587 486 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 TOP6BLQ8N6T0 577 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 ZNF655Q8N720 491 aaPredicted RBP-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 ANKS4BQ8N8V4 417 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 AMER3Q8N944 861 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 ANKRD52Q8NB46 1076 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 NFAM1Q8NET5 270 aaPredicted RBP-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 TRIM58Q8NG06 486 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 THAP3Q8WTV1 239 aaPredicted RBP-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 CYB5D2Q8WUJ1 264 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 SLC25A43Q8WUT9 341 aaPredicted RBP-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 WNT8BQ93098 351 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 CAVIN3Q969G5 261 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 UBE2FQ969M7 185 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 SARAFQ96BY9 339 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 SYTL4Q96C24 671 aaPredicted RBP-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 C16orf92Q96LL3 132 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 NOX5Q96PH1 765 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 LMF1Q96S06 567 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 ATOH8Q96SQ7 321 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 ALOXE3Q9BYJ1 711 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 GSX2Q9BZM3 304 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 FOXQ1Q9C009 403 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 ZMYND15Q9H091 742 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 NTN4Q9HB63 628 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 GP6Q9HCN6 339 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 OSGEPQ9NPF4 335 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 TLR9Q9NR96 1032 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 TUBA8Q9NY65 449 aaPredicted RBP-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 FLRT1Q9NZU1 646 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 ZSWIM5Q9P217 1185 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 NYAP2Q9P242 653 aa-0.59□□□□□ -2.5
CDKL5-210ENST00000636046 DAXXQ9UER7 740 aaPredicted RBP-0.59□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms