RNA–Protein interactions for RNA: ENST00000635578.1

SMARCB1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 242 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-209ENST00000635578 A0A087WZG4 1122 aa1.96□□□□□ -2.1
SMARCB1-209ENST00000635578 PPM1BO75688 479 aa1.96□□□□□ -2.1
SMARCB1-209ENST00000635578 CYP7B1O75881 506 aa1.96□□□□□ -2.1
SMARCB1-209ENST00000635578 ADH4P08319 380 aa1.96□□□□□ -2.1
SMARCB1-209ENST00000635578 ACO1P21399 889 aaKnown RBP1.96□□□□□ -2.1
SMARCB1-209ENST00000635578 COMTP21964 271 aa1.96□□□□□ -2.1
SMARCB1-209ENST00000635578 GUCY2CP25092 1073 aa1.96□□□□□ -2.1
SMARCB1-209ENST00000635578 IL12RB1P42701 662 aa1.96□□□□□ -2.1
SMARCB1-209ENST00000635578 KCNA1Q09470 495 aa1.96□□□□□ -2.1
SMARCB1-209ENST00000635578 CSRP2Q16527 193 aa1.96□□□□□ -2.1
SMARCB1-209ENST00000635578 TAX1BP1Q86VP1 789 aa1.96□□□□□ -2.1
SMARCB1-209ENST00000635578 C1orf210Q8IVY1 113 aa1.96□□□□□ -2.1
SMARCB1-209ENST00000635578 SLITRK4Q8IW52 837 aa1.96□□□□□ -2.1
SMARCB1-209ENST00000635578 AMER2Q8N7J2 671 aa1.96□□□□□ -2.1
SMARCB1-209ENST00000635578 ARRDC4Q8NCT1 418 aa1.96□□□□□ -2.1
SMARCB1-209ENST00000635578 TOE1Q96GM8 510 aaKnown RBP1.96□□□□□ -2.1
SMARCB1-209ENST00000635578 PLEKHG4BQ96PX9 1271 aa1.96□□□□□ -2.1
SMARCB1-209ENST00000635578 TM9SF2Q99805 663 aa1.96□□□□□ -2.1
SMARCB1-209ENST00000635578 KLHL25Q9H0H3 589 aa1.96□□□□□ -2.1
SMARCB1-209ENST00000635578 NGRNQ9NPE2 291 aaKnown RBP1.96□□□□□ -2.1
SMARCB1-209ENST00000635578 TMEFF2Q9UIK5 374 aaPredicted RBP1.96□□□□□ -2.1
SMARCB1-209ENST00000635578 PPT2Q9UMR5 302 aa1.96□□□□□ -2.1
SMARCB1-209ENST00000635578 SUGT1Q9Y2Z0 365 aa1.96□□□□□ -2.1
SMARCB1-209ENST00000635578 PLSCR1O15162 318 aa1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 KCNH1O95259 989 aa1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 IMPDH2P12268 514 aa1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 SLC6A11P48066 632 aa1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 ATXN1P54253 815 aaKnown RBP1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 PURAQ00577 322 aaKnown RBP1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 SCRN1Q12765 414 aa1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 INF2Q27J81 1249 aa1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 AGBL4Q5VU57 503 aa1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 TEPPQ6URK8 271 aa1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 CEP68Q76N32 757 aa1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 HS2ST1Q7LGA3 356 aa1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 FBXO33Q7Z6M2 555 aa1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 LDLRAD3Q86YD5 345 aa1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 KIAA0825Q8IV33 1275 aa1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 SCUBE1Q8IWY4 988 aa1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 HOMEZQ8IX15 550 aa1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 IFNL2Q8IZJ0 200 aa1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 FUKQ8N0W3 1084 aa1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 TAB3Q8N5C8 712 aaPredicted RBP1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 LARP4BQ92615 738 aaKnown RBP1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 VOPP1Q96AW1 172 aa1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 TRMT2BQ96GJ1 504 aaKnown RBP1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 TMEM209Q96SK2 561 aa1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 AGAP2Q99490 1192 aa1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 SPON2Q9BUD6 331 aa1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 NT5C1AQ9BXI3 368 aa1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 MMRN2Q9H8L6 949 aa1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 SEC61A2Q9H9S3 476 aa1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 DLL4Q9NR61 685 aa1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 DTLQ9NZJ0 730 aa1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 ADAM29Q9UKF5 820 aa1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 WASF3Q9UPY6 502 aa1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 PTPN22Q9Y2R2 807 aa1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 REXO2Q9Y3B8 237 aaKnown RBP1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 PCDHB4Q9Y5E5 795 aa1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 CCDC180Q9P1Z9 1646 aa1.95□□□□□ -2.1
SMARCB1-209ENST00000635578 RAMP2O60895 175 aa1.94□□□□□ -2.1
SMARCB1-209ENST00000635578 FBXO21O94952 628 aa1.94□□□□□ -2.1
SMARCB1-209ENST00000635578 COL6A1P12109 1028 aa1.94□□□□□ -2.1
SMARCB1-209ENST00000635578 BMP5P22003 454 aa1.94□□□□□ -2.1
SMARCB1-209ENST00000635578 BCL6P41182 706 aa1.94□□□□□ -2.1
SMARCB1-209ENST00000635578 GLRBP48167 497 aa1.94□□□□□ -2.1
SMARCB1-209ENST00000635578 RPL11P62913 178 aaKnown RBP1.94□□□□□ -2.1
SMARCB1-209ENST00000635578 GRB10Q13322 594 aa1.94□□□□□ -2.1
SMARCB1-209ENST00000635578 TUBA3CQ13748 450 aa1.94□□□□□ -2.1
SMARCB1-209ENST00000635578 MROH9Q5TGP6 573 aa1.94□□□□□ -2.1
SMARCB1-209ENST00000635578 STEAP3Q658P3 488 aa1.94□□□□□ -2.1
SMARCB1-209ENST00000635578 TUBA3EQ6PEY2 450 aa1.94□□□□□ -2.1
SMARCB1-209ENST00000635578 CCDC81Q6ZN84 652 aa1.94□□□□□ -2.1
SMARCB1-209ENST00000635578 Q6ZUG5 572 aa1.94□□□□□ -2.1
SMARCB1-209ENST00000635578 ZNF627Q7L945 461 aa1.94□□□□□ -2.1
SMARCB1-209ENST00000635578 MRGPRGQ86SM5 289 aa1.94□□□□□ -2.1
SMARCB1-209ENST00000635578 NLRP10Q86W26 655 aa1.94□□□□□ -2.1
SMARCB1-209ENST00000635578 ARHGEF39Q8N4T4 335 aa1.94□□□□□ -2.1
SMARCB1-209ENST00000635578 IL17DQ8TAD2 202 aa1.94□□□□□ -2.1
SMARCB1-209ENST00000635578 ZNF483Q8TF39 744 aaPredicted RBP1.94□□□□□ -2.1
SMARCB1-209ENST00000635578 CACTINQ8WUQ7 758 aaKnown RBP1.94□□□□□ -2.1
SMARCB1-209ENST00000635578 EDAQ92838 391 aa1.94□□□□□ -2.1
SMARCB1-209ENST00000635578 PPP1R14AQ96A00 147 aa1.94□□□□□ -2.1
SMARCB1-209ENST00000635578 NEIL1Q96FI4 390 aaPredicted RBP1.94□□□□□ -2.1
SMARCB1-209ENST00000635578 OR14A2Q96R54 314 aa1.94□□□□□ -2.1
SMARCB1-209ENST00000635578 WRNIP1Q96S55 665 aa1.94□□□□□ -2.1
SMARCB1-209ENST00000635578 AKT3Q9Y243 479 aa1.94□□□□□ -2.1
SMARCB1-209ENST00000635578 COA3Q9Y2R0 106 aaPredicted RBP1.94□□□□□ -2.1
SMARCB1-209ENST00000635578 DMRT1Q9Y5R6 373 aa1.94□□□□□ -2.1
SMARCB1-209ENST00000635578 SLC4A7Q9Y6M7 1214 aa1.94□□□□□ -2.1
SMARCB1-209ENST00000635578 TCRBV5S2A0A599 114 aa1.93□□□□□ -2.1
SMARCB1-209ENST00000635578 ZBTB7CA1YPR0 619 aa1.93□□□□□ -2.1
SMARCB1-209ENST00000635578 PATL2C9JE40 543 aaKnown RBP1.93□□□□□ -2.1
SMARCB1-209ENST00000635578 HGSO14964 777 aaPredicted RBP1.93□□□□□ -2.1
SMARCB1-209ENST00000635578 U2SURPO15042 1029 aaKnown RBP1.93□□□□□ -2.1
SMARCB1-209ENST00000635578 RAD17O75943 681 aa1.93□□□□□ -2.1
SMARCB1-209ENST00000635578 KLHL18O94889 574 aa1.93□□□□□ -2.1
SMARCB1-209ENST00000635578 LRG1P02750 347 aa1.93□□□□□ -2.1
SMARCB1-209ENST00000635578 ZNF888P0CJ79 500 aaPredicted RBP1.93□□□□□ -2.1
SMARCB1-209ENST00000635578 CSF2RBP32927 897 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms