RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 CYP3A7-CYP3A51PA0A087WV96 503 aa8□□□□□ -1.13
BRCA1-230ENST00000634433 KIF2AO00139 706 aaPredicted RBP8□□□□□ -1.13
BRCA1-230ENST00000634433 PLA2G6O60733 806 aa8□□□□□ -1.13
BRCA1-230ENST00000634433 TUBB4AP04350 444 aa8□□□□□ -1.13
BRCA1-230ENST00000634433 CYP3A7P24462 503 aa8□□□□□ -1.13
BRCA1-230ENST00000634433 CASP1P29466 404 aa8□□□□□ -1.13
BRCA1-230ENST00000634433 UBE2SQ16763 222 aa8□□□□□ -1.13
BRCA1-230ENST00000634433 SH3D19Q5HYK7 790 aa8□□□□□ -1.13
BRCA1-230ENST00000634433 SPECC1LQ69YQ0 1117 aa8□□□□□ -1.13
BRCA1-230ENST00000634433 TRMT44Q8IYL2 757 aaKnown RBP8□□□□□ -1.13
BRCA1-230ENST00000634433 NOC3LQ8WTT2 800 aaKnown RBP8□□□□□ -1.13
BRCA1-230ENST00000634433 STAMQ92783 540 aa8□□□□□ -1.13
BRCA1-230ENST00000634433 TMX2Q9Y320 296 aa8□□□□□ -1.13
BRCA1-230ENST00000634433 SIPA1L1O43166 1804 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 A0A1B0GTH6 734 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 PP2D1A8MPX8 630 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 PSMA7O14818 248 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 CD44P16070 742 aaKnown RBP7.99□□□□□ -1.13
BRCA1-230ENST00000634433 CCZ1BP86790 482 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 CCZ1P86791 482 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-230ENST00000634433 CXCL9Q07325 125 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 TNFAIP1Q13829 316 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 NR1I3Q14994 352 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 CDKAL1Q5VV42 579 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 NOP9Q86U38 636 aaKnown RBP7.99□□□□□ -1.13
BRCA1-230ENST00000634433 FAM160B2Q86V87 743 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 SLFN12Q8IYM2 578 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 C17orf53Q8N3J3 647 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-230ENST00000634433 STK32AQ8WU08 396 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 NELFBQ8WX92 580 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 DPF2Q92785 391 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 DHTKD1Q96HY7 919 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-230ENST00000634433 MPHOSPH6Q99547 160 aaKnown RBP7.99□□□□□ -1.13
BRCA1-230ENST00000634433 SAMSN1Q9NSI8 373 aaKnown RBP7.99□□□□□ -1.13
BRCA1-230ENST00000634433 EXOC1Q9NV70 894 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 CTNND2Q9UQB3 1225 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 ZBTB12Q9Y330 459 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-230ENST00000634433 COMMD10Q9Y6G5 202 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 PVALEFA0A1B0GWK0 134 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 BICDL2A1A5D9 508 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 SPDYE3A6NKU9 549 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 TDP2O95551 362 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 TPM1P09493 284 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 SLURP2P0DP57 97 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 STAT2P52630 851 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 STX17P56962 302 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 MAP3K10Q02779 954 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 KMT5BQ4FZB7 885 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 LDLRAD1Q5T700 205 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 ARMCX5Q6P1M9 558 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 CNNM4Q6P4Q7 775 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 ADSSL1Q8N142 457 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 GIMAP8Q8ND71 665 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-230ENST00000634433 ZBED3Q96IU2 234 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-230ENST00000634433 ANO3Q9BYT9 981 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 NT5C3AQ9H0P0 336 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 PCDH12Q9NPG4 1184 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 ZBTB21Q9ULJ3 1066 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 TPX2Q9ULW0 747 aaKnown RBP7.99□□□□□ -1.13
BRCA1-230ENST00000634433 PCDHA12Q9UN75 941 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 KDM3AQ9Y4C1 1321 aa7.99□□□□□ -1.13
BRCA1-230ENST00000634433 LRRC10BA6NIK2 292 aa7.98□□□□□ -1.13
BRCA1-230ENST00000634433 TBX3O15119 743 aa7.98□□□□□ -1.13
BRCA1-230ENST00000634433 SLC37A4O43826 429 aa7.98□□□□□ -1.13
BRCA1-230ENST00000634433 ASNSP08243 561 aa7.98□□□□□ -1.13
BRCA1-230ENST00000634433 HSPA1AP0DMV8 641 aaKnown RBP7.98□□□□□ -1.13
BRCA1-230ENST00000634433 HSPA1BP0DMV9 641 aaKnown RBP7.98□□□□□ -1.13
BRCA1-230ENST00000634433 NUBP1P53384 320 aa7.98□□□□□ -1.13
BRCA1-230ENST00000634433 CNTNAP1P78357 1384 aa7.98□□□□□ -1.13
BRCA1-230ENST00000634433 ARID5BQ14865 1188 aa7.98□□□□□ -1.13
BRCA1-230ENST00000634433 COBLL1Q53SF7 1204 aa7.98□□□□□ -1.13
BRCA1-230ENST00000634433 PPFIBP1Q86W92 1011 aa7.98□□□□□ -1.13
BRCA1-230ENST00000634433 SNX29Q8TEQ0 813 aa7.98□□□□□ -1.13
BRCA1-230ENST00000634433 MED15Q96RN5 788 aa7.98□□□□□ -1.13
BRCA1-230ENST00000634433 PLIN2Q99541 437 aa7.98□□□□□ -1.13
BRCA1-230ENST00000634433 TRIM9Q9C026 710 aa7.98□□□□□ -1.13
BRCA1-230ENST00000634433 EHMT1Q9H9B1 1298 aa7.98□□□□□ -1.13
BRCA1-230ENST00000634433 MYOZ2Q9NPC6 264 aa7.98□□□□□ -1.13
BRCA1-230ENST00000634433 BMP2KQ9NSY1 1161 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-230ENST00000634433 LIMA1Q9UHB6 759 aaKnown RBP7.98□□□□□ -1.13
BRCA1-230ENST00000634433 PAXBP1Q9Y5B6 917 aa7.98□□□□□ -1.13
BRCA1-230ENST00000634433 KLRC4O43908 158 aa7.98□□□□□ -1.13
BRCA1-230ENST00000634433 CAP2P40123 477 aa7.98□□□□□ -1.13
BRCA1-230ENST00000634433 PRCPP42785 496 aa7.98□□□□□ -1.13
BRCA1-230ENST00000634433 ZNF280AP59817 542 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-230ENST00000634433 ASIC1P78348 528 aa7.98□□□□□ -1.13
BRCA1-230ENST00000634433 TBX2Q13207 712 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-230ENST00000634433 SHROOM1Q2M3G4 852 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-230ENST00000634433 FCHSD1Q86WN1 690 aa7.98□□□□□ -1.13
BRCA1-230ENST00000634433 SMYD4Q8IYR2 804 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-230ENST00000634433 LARP4BQ92615 738 aaKnown RBP7.98□□□□□ -1.13
BRCA1-230ENST00000634433 MBOAT7Q96N66 472 aa7.98□□□□□ -1.13
BRCA1-230ENST00000634433 MMTAG2Q9BU76 263 aaKnown RBP7.98□□□□□ -1.13
BRCA1-230ENST00000634433 PPP1R12CQ9BZL4 782 aa7.98□□□□□ -1.13
BRCA1-230ENST00000634433 THAP9Q9H5L6 903 aa7.98□□□□□ -1.13
BRCA1-230ENST00000634433 VCPKMTQ9H867 229 aa7.98□□□□□ -1.13
BRCA1-230ENST00000634433 NMRK2Q9NPI5 230 aa7.98□□□□□ -1.13
BRCA1-230ENST00000634433 FEM1BQ9UK73 627 aa7.98□□□□□ -1.13
BRCA1-230ENST00000634433 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.98□□□□□ -1.135e-6■□□□□ 10.3
BRCA1-230ENST00000634433 LTBP3Q9NS15 1303 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms