RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 CDHR1Q96JP9 859 aa13.95□□□□□ -0.18
SYNGAP1-207ENST00000628646 PRIMPOLQ96LW4 560 aa13.95□□□□□ -0.18
SYNGAP1-207ENST00000628646 PLIN4Q96Q06 1357 aa13.95□□□□□ -0.18
SYNGAP1-207ENST00000628646 PPP6R2O75170 966 aa13.95□□□□□ -0.18
SYNGAP1-207ENST00000628646 NR3C2P08235 984 aa13.95□□□□□ -0.18
SYNGAP1-207ENST00000628646 TEKT3Q9BXF9 490 aa13.95□□□□□ -0.18
SYNGAP1-207ENST00000628646 MTMR1Q13613 665 aa13.95□□□□□ -0.18
SYNGAP1-207ENST00000628646 GLIPR1L2Q4G1C9 344 aa13.95□□□□□ -0.18
SYNGAP1-207ENST00000628646 TUBE1Q9UJT0 475 aa13.95□□□□□ -0.18
SYNGAP1-207ENST00000628646 RRAGBQ5VZM2 374 aa13.95□□□□□ -0.18
SYNGAP1-207ENST00000628646 TPH2Q8IWU9 490 aa13.95□□□□□ -0.18
SYNGAP1-207ENST00000628646 DHX37Q8IY37 1157 aaKnown RBP13.95□□□□□ -0.18
SYNGAP1-207ENST00000628646 KCNH4Q9UQ05 1017 aa13.95□□□□□ -0.18
SYNGAP1-207ENST00000628646 SLC10A3P09131 477 aa13.94□□□□□ -0.18
SYNGAP1-207ENST00000628646 RGS2P41220 211 aa13.94□□□□□ -0.18
SYNGAP1-207ENST00000628646 AFMP43652 599 aa13.94□□□□□ -0.18
SYNGAP1-207ENST00000628646 VEGFBP49765 207 aa13.94□□□□□ -0.18
SYNGAP1-207ENST00000628646 CYP4A11Q02928 519 aa13.94□□□□□ -0.18
SYNGAP1-207ENST00000628646 MUM1L1Q5H9M0 696 aa13.94□□□□□ -0.18
SYNGAP1-207ENST00000628646 FAM205CA6NFA0 338 aa13.94□□□□□ -0.18
SYNGAP1-207ENST00000628646 GCFC2P16383 781 aaKnown RBP13.94□□□□□ -0.18
SYNGAP1-207ENST00000628646 CRHR2Q13324 411 aa13.94□□□□□ -0.18
SYNGAP1-207ENST00000628646 HAUS3Q68CZ6 603 aa13.94□□□□□ -0.18
SYNGAP1-207ENST00000628646 RANBP17Q9H2T7 1088 aaKnown RBP13.94□□□□□ -0.18
SYNGAP1-207ENST00000628646 PCDHB6Q9Y5E3 794 aa13.94□□□□□ -0.18
SYNGAP1-207ENST00000628646 FUT2Q10981 343 aa13.94□□□□□ -0.18
SYNGAP1-207ENST00000628646 RESP18Q5W5W9 173 aa13.94□□□□□ -0.18
SYNGAP1-207ENST00000628646 LRRC8AQ8IWT6 810 aa13.94□□□□□ -0.18
SYNGAP1-207ENST00000628646 ZMYND12Q9H0C1 365 aa13.94□□□□□ -0.18
SYNGAP1-207ENST00000628646 ADORA2AP29274 412 aa13.93□□□□□ -0.18
SYNGAP1-207ENST00000628646 TRAPPC10P48553 1259 aa13.93□□□□□ -0.18
SYNGAP1-207ENST00000628646 CCZ1BP86790 482 aa13.93□□□□□ -0.18
SYNGAP1-207ENST00000628646 CCZ1P86791 482 aaPredicted RBP13.93□□□□□ -0.18
SYNGAP1-207ENST00000628646 SLFN12Q8IYM2 578 aa13.93□□□□□ -0.18
SYNGAP1-207ENST00000628646 C12orf42Q96LP6 360 aa13.93□□□□□ -0.18
SYNGAP1-207ENST00000628646 TIGD1Q96MW7 591 aa13.93□□□□□ -0.18
SYNGAP1-207ENST00000628646 PHF20Q9BVI0 1012 aa13.93□□□□□ -0.18
SYNGAP1-207ENST00000628646 GINS2Q9Y248 185 aa13.93□□□□□ -0.18
SYNGAP1-207ENST00000628646 TDP2O95551 362 aa13.93□□□□□ -0.18
SYNGAP1-207ENST00000628646 OAZ1P54368 228 aa13.93□□□□□ -0.18
SYNGAP1-207ENST00000628646 MDM2Q00987 491 aaPredicted RBP13.93□□□□□ -0.18
SYNGAP1-207ENST00000628646 SNHG28P0DPA3 235 aa13.93□□□□□ -0.18
SYNGAP1-207ENST00000628646 CNTN2Q02246 1040 aa13.93□□□□□ -0.18
SYNGAP1-207ENST00000628646 MAP3K10Q02779 954 aa13.93□□□□□ -0.18
SYNGAP1-207ENST00000628646 LBX2Q6XYB7 198 aa13.93□□□□□ -0.18
SYNGAP1-207ENST00000628646 REM2Q8IYK8 340 aaPredicted RBP13.93□□□□□ -0.18
SYNGAP1-207ENST00000628646 AOPEPQ8N6M6 819 aa13.93□□□□□ -0.18
SYNGAP1-207ENST00000628646 UBE2Q2Q8WVN8 375 aa13.93□□□□□ -0.18
SYNGAP1-207ENST00000628646 TSC1Q92574 1164 aa13.93□□□□□ -0.18
SYNGAP1-207ENST00000628646 ERO1AQ96HE7 468 aa13.93□□□□□ -0.18
SYNGAP1-207ENST00000628646 A1CFQ9NQ94 594 aaKnown RBP13.93□□□□□ -0.18
SYNGAP1-207ENST00000628646 ARFGEF1Q9Y6D6 1849 aa13.93□□□□□ -0.18
SYNGAP1-207ENST00000628646 CA12O43570 354 aa13.93□□□□□ -0.18
SYNGAP1-207ENST00000628646 PKN1Q16512 942 aa13.93□□□□□ -0.18
SYNGAP1-207ENST00000628646 SH3D19Q5HYK7 790 aa13.93□□□□□ -0.18
SYNGAP1-207ENST00000628646 BTNL9Q6UXG8 535 aa13.93□□□□□ -0.18
SYNGAP1-207ENST00000628646 TRPC6Q9Y210 931 aa13.93□□□□□ -0.18
SYNGAP1-207ENST00000628646 MYPNQ86TC9 1320 aa13.92□□□□□ -0.18
SYNGAP1-207ENST00000628646 POLR2AP24928 1970 aaKnown RBP13.92□□□□□ -0.18
SYNGAP1-207ENST00000628646 HOXA7P31268 230 aaPredicted RBP13.92□□□□□ -0.18
SYNGAP1-207ENST00000628646 RBM10P98175 930 aaKnown RBP13.92□□□□□ -0.18
SYNGAP1-207ENST00000628646 TTLL4Q14679 1199 aa13.92□□□□□ -0.18
SYNGAP1-207ENST00000628646 FAM110CQ1W6H9 321 aa13.92□□□□□ -0.18
SYNGAP1-207ENST00000628646 RIOX2Q8IUF8 465 aa13.92□□□□□ -0.18
SYNGAP1-207ENST00000628646 BTBD7Q9P203 1132 aa13.92□□□□□ -0.18
SYNGAP1-207ENST00000628646 COL2A1P02458 1487 aaPredicted RBP13.92□□□□□ -0.18
SYNGAP1-207ENST00000628646 STRNO43815 780 aa13.92□□□□□ -0.18
SYNGAP1-207ENST00000628646 FKTNO75072 461 aa13.92□□□□□ -0.18
SYNGAP1-207ENST00000628646 MATR3P43243 847 aaKnown RBP eCLIP13.92□□□□□ -0.18
SYNGAP1-207ENST00000628646 SLC30A10Q6XR72 485 aa13.92□□□□□ -0.18
SYNGAP1-207ENST00000628646 MAEAQ7L5Y9 396 aa13.92□□□□□ -0.18
SYNGAP1-207ENST00000628646 CLIC6Q96NY7 704 aa13.92□□□□□ -0.18
SYNGAP1-207ENST00000628646 PORCNQ9H237 461 aa13.92□□□□□ -0.18
SYNGAP1-207ENST00000628646 KCND1Q9NSA2 647 aa13.92□□□□□ -0.18
SYNGAP1-207ENST00000628646 TXNP10599 105 aaKnown RBP13.92□□□□□ -0.18
SYNGAP1-207ENST00000628646 HSPA6P17066 643 aa13.92□□□□□ -0.18
SYNGAP1-207ENST00000628646 BMP6P22004 513 aa13.92□□□□□ -0.18
SYNGAP1-207ENST00000628646 GJA5P36382 358 aa13.92□□□□□ -0.18
SYNGAP1-207ENST00000628646 C1QTNF8P60827 252 aa13.92□□□□□ -0.18
SYNGAP1-207ENST00000628646 AMPD3Q01432 767 aa13.92□□□□□ -0.18
SYNGAP1-207ENST00000628646 GRIN1Q05586 938 aa13.92□□□□□ -0.18
SYNGAP1-207ENST00000628646 HSP90AA2PQ14568 343 aaPredicted RBP13.92□□□□□ -0.18
SYNGAP1-207ENST00000628646 CEP55Q53EZ4 464 aa13.92□□□□□ -0.18
SYNGAP1-207ENST00000628646 SYTL5Q8TDW5 730 aaPredicted RBP13.92□□□□□ -0.18
SYNGAP1-207ENST00000628646 RIPK3Q9Y572 518 aa13.92□□□□□ -0.18
SYNGAP1-207ENST00000628646 CUTAO60888 179 aa13.91□□□□□ -0.18
SYNGAP1-207ENST00000628646 TBCAO75347 108 aaKnown RBP13.91□□□□□ -0.18
SYNGAP1-207ENST00000628646 FILIP1LQ4L180 1135 aa13.91□□□□□ -0.18
SYNGAP1-207ENST00000628646 FERMT2Q96AC1 680 aa13.91□□□□□ -0.18
SYNGAP1-207ENST00000628646 PDCL3Q9H2J4 239 aa13.91□□□□□ -0.18
SYNGAP1-207ENST00000628646 CDK5RAP2Q96SN8 1893 aa13.91□□□□□ -0.18
SYNGAP1-207ENST00000628646 CCP110O43303 1012 aa13.91□□□□□ -0.18
SYNGAP1-207ENST00000628646 CTIFO43310 598 aaKnown RBP13.91□□□□□ -0.18
SYNGAP1-207ENST00000628646 CDC25AP30304 524 aa13.91□□□□□ -0.18
SYNGAP1-207ENST00000628646 NLRP12P59046 1061 aa13.91□□□□□ -0.18
SYNGAP1-207ENST00000628646 IGF2BP3O00425 579 aaKnown RBP eCLIP13.91□□□□□ -0.18
SYNGAP1-207ENST00000628646 TLR2O60603 784 aa13.91□□□□□ -0.18
SYNGAP1-207ENST00000628646 SERPINC1P01008 464 aa13.91□□□□□ -0.18
SYNGAP1-207ENST00000628646 USP27XA6NNY8 438 aa13.9□□□□□ -0.18
SYNGAP1-207ENST00000628646 DKC1O60832 514 aaKnown RBP eCLIP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms