RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 LRIG3Q6UXM1 1119 aa16.67■□□□□ 0.26
PMS1-221ENST00000624204 ARMC9Q7Z3E5 817 aa16.67■□□□□ 0.26
PMS1-221ENST00000624204 KCNV2Q8TDN2 545 aa16.67■□□□□ 0.26
PMS1-221ENST00000624204 TNFRSF25Q93038 417 aa16.67■□□□□ 0.26
PMS1-221ENST00000624204 DDX47Q9H0S4 455 aaKnown RBP16.67■□□□□ 0.26
PMS1-221ENST00000624204 CD2APQ9Y5K6 639 aa16.67■□□□□ 0.26
PMS1-221ENST00000624204 ABCC12Q96J65 1359 aa16.67■□□□□ 0.26
PMS1-221ENST00000624204 CYP27B1O15528 508 aa16.66■□□□□ 0.26
PMS1-221ENST00000624204 VWA3BQ502W6 1294 aa16.66■□□□□ 0.26
PMS1-221ENST00000624204 C3orf20Q8ND61 904 aa16.66■□□□□ 0.26
PMS1-221ENST00000624204 ISCUQ9H1K1 167 aa16.66■□□□□ 0.26
PMS1-221ENST00000624204 KDM4CQ9H3R0 1056 aa16.66■□□□□ 0.26
PMS1-221ENST00000624204 LRP2BPQ9P2M1 347 aa16.66■□□□□ 0.26
PMS1-221ENST00000624204 JAG2Q9Y219 1238 aa16.66■□□□□ 0.26
PMS1-221ENST00000624204 NMT2O60551 498 aa16.66■□□□□ 0.26
PMS1-221ENST00000624204 DRD4P21917 467 aa16.66■□□□□ 0.26
PMS1-221ENST00000624204 PRPF4BQ13523 1007 aaKnown RBP16.66■□□□□ 0.26
PMS1-221ENST00000624204 LLGL1Q15334 1064 aa16.66■□□□□ 0.26
PMS1-221ENST00000624204 KIAA0753Q2KHM9 967 aa16.66■□□□□ 0.26
PMS1-221ENST00000624204 FIGNQ5HY92 759 aa16.66■□□□□ 0.26
PMS1-221ENST00000624204 TRIM68Q6AZZ1 485 aa16.66■□□□□ 0.26
PMS1-221ENST00000624204 AGAP11Q8TF27 550 aa16.66■□□□□ 0.26
PMS1-221ENST00000624204 NEUROG2Q9H2A3 272 aa16.66■□□□□ 0.26
PMS1-221ENST00000624204 SWAP70Q9UH65 585 aa16.66■□□□□ 0.26
PMS1-221ENST00000624204 ARMC3Q5W041 872 aa16.66■□□□□ 0.26
PMS1-221ENST00000624204 MAB21L3Q8N8X9 362 aa16.66■□□□□ 0.26
PMS1-221ENST00000624204 USP38Q8NB14 1042 aa16.66■□□□□ 0.26
PMS1-221ENST00000624204 SPATA5Q8NB90 893 aa16.66■□□□□ 0.26
PMS1-221ENST00000624204 C1orf131Q8NDD1 294 aaKnown RBP16.66■□□□□ 0.26
PMS1-221ENST00000624204 MGARPQ8TDB4 240 aa16.66■□□□□ 0.26
PMS1-221ENST00000624204 PANK4Q9NVE7 773 aa16.66■□□□□ 0.26
PMS1-221ENST00000624204 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.66■□□□□ 0.26
PMS1-221ENST00000624204 PNMA2Q9UL42 364 aa16.66■□□□□ 0.26
PMS1-221ENST00000624204 DDX60Q8IY21 1712 aaKnown RBP16.65■□□□□ 0.26
PMS1-221ENST00000624204 F8W031 263 aaPredicted RBP16.65■□□□□ 0.26
PMS1-221ENST00000624204 PPIP5K2O43314 1243 aa16.65■□□□□ 0.26
PMS1-221ENST00000624204 ORC4O43929 436 aa16.65■□□□□ 0.26
PMS1-221ENST00000624204 LGR5O75473 907 aa16.65■□□□□ 0.26
PMS1-221ENST00000624204 VIMP08670 466 aaKnown RBP16.65■□□□□ 0.26
PMS1-221ENST00000624204 C11orf91Q3C1V1 193 aa16.65■□□□□ 0.26
PMS1-221ENST00000624204 DYMQ7RTS9 669 aa16.65■□□□□ 0.26
PMS1-221ENST00000624204 RNF10Q8N5U6 811 aaKnown RBP16.65■□□□□ 0.26
PMS1-221ENST00000624204 ELAC2Q9BQ52 826 aaKnown RBP16.65■□□□□ 0.26
PMS1-221ENST00000624204 BATF3Q9NR55 127 aa16.65■□□□□ 0.26
PMS1-221ENST00000624204 H0YGN5 161 aa16.65■□□□□ 0.26
PMS1-221ENST00000624204 DAPK3O43293 454 aa16.65■□□□□ 0.26
PMS1-221ENST00000624204 AP1G2O75843 785 aa16.65■□□□□ 0.26
PMS1-221ENST00000624204 DHX9Q08211 1270 aaKnown RBP16.65■□□□□ 0.26
PMS1-221ENST00000624204 FUT2Q10981 343 aa16.65■□□□□ 0.26
PMS1-221ENST00000624204 SPDYE1Q8NFV5 336 aaPredicted RBP16.65■□□□□ 0.26
PMS1-221ENST00000624204 INPP4AQ96PE3 977 aaPredicted RBP16.65■□□□□ 0.26
PMS1-221ENST00000624204 XPO6Q96QU8 1125 aaKnown RBP16.65■□□□□ 0.26
PMS1-221ENST00000624204 PSMD1Q99460 953 aa16.65■□□□□ 0.26
PMS1-221ENST00000624204 SH3GL3Q99963 347 aa16.65■□□□□ 0.26
PMS1-221ENST00000624204 NFS1Q9Y697 457 aa16.65■□□□□ 0.26
PMS1-221ENST00000624204 C5orf60A6NFR6 353 aa16.64■□□□□ 0.25
PMS1-221ENST00000624204 TBC1D5Q92609 795 aa16.64■□□□□ 0.25
PMS1-221ENST00000624204 P3H4Q92791 437 aa16.64■□□□□ 0.25
PMS1-221ENST00000624204 ZSCAN10Q96SZ4 725 aaPredicted RBP16.64■□□□□ 0.25
PMS1-221ENST00000624204 LRRC4CQ9HCJ2 640 aa16.64■□□□□ 0.25
PMS1-221ENST00000624204 MLXIPLQ9NP71 852 aa16.64■□□□□ 0.25
PMS1-221ENST00000624204 NOP53Q9NZM5 478 aaKnown RBP16.64■□□□□ 0.25
PMS1-221ENST00000624204 FBXO3Q9UK99 471 aa16.64■□□□□ 0.25
PMS1-221ENST00000624204 ARFGEF2Q9Y6D5 1785 aa16.64■□□□□ 0.25
PMS1-221ENST00000624204 HNRNPH3P31942 346 aaKnown RBP16.64■□□□□ 0.25
PMS1-221ENST00000624204 SLC9C1Q4G0N8 1177 aa16.64■□□□□ 0.25
PMS1-221ENST00000624204 FAM47AQ5JRC9 791 aa16.64■□□□□ 0.25
PMS1-221ENST00000624204 STAG2Q8N3U4 1231 aa16.64■□□□□ 0.25
PMS1-221ENST00000624204 CALR3Q96L12 384 aaKnown RBP16.64■□□□□ 0.25
PMS1-221ENST00000624204 TMEM60Q9H2L4 133 aa16.64■□□□□ 0.25
PMS1-221ENST00000624204 LUC7LQ9NQ29 371 aaKnown RBP16.64■□□□□ 0.25
PMS1-221ENST00000624204 SIK3Q9Y2K2 1263 aa16.64■□□□□ 0.25
PMS1-221ENST00000624204 ATP8A1Q9Y2Q0 1164 aa16.64■□□□□ 0.25
PMS1-221ENST00000624204 NID2Q14112 1375 aa16.64■□□□□ 0.25
PMS1-221ENST00000624204 PJA2O43164 708 aa16.64■□□□□ 0.25
PMS1-221ENST00000624204 MMEP08473 750 aa16.64■□□□□ 0.25
PMS1-221ENST00000624204 ADCY1Q08828 1119 aa16.64■□□□□ 0.25
PMS1-221ENST00000624204 LRRC41Q15345 812 aa16.64■□□□□ 0.25
PMS1-221ENST00000624204 RPS6KA1Q15418 735 aa16.64■□□□□ 0.25
PMS1-221ENST00000624204 SEC23AQ15436 765 aa16.64■□□□□ 0.25
PMS1-221ENST00000624204 CCDC84Q86UT8 332 aaPredicted RBP16.64■□□□□ 0.25
PMS1-221ENST00000624204 PRCCQ92733 491 aaPredicted RBP16.64■□□□□ 0.25
PMS1-221ENST00000624204 PACSIN1Q9BY11 444 aa16.64■□□□□ 0.25
PMS1-221ENST00000624204 EBF2Q9HAK2 575 aa16.64■□□□□ 0.25
PMS1-221ENST00000624204 SAMD15Q9P1V8 674 aa16.64■□□□□ 0.25
PMS1-221ENST00000624204 SART1O43290 800 aaKnown RBP16.63■□□□□ 0.25
PMS1-221ENST00000624204 UQCRFS1P1P0C7P4 283 aa16.63■□□□□ 0.25
PMS1-221ENST00000624204 GHRP10912 638 aa16.63■□□□□ 0.25
PMS1-221ENST00000624204 PLCG1P19174 1290 aa16.63■□□□□ 0.25
PMS1-221ENST00000624204 RASGRF1Q13972 1273 aa16.63■□□□□ 0.25
PMS1-221ENST00000624204 DZIP3Q86Y13 1208 aaKnown RBP16.63■□□□□ 0.25
PMS1-221ENST00000624204 SRBD1Q8N5C6 995 aaKnown RBP16.63■□□□□ 0.25
PMS1-221ENST00000624204 TBC1D7Q9P0N9 293 aa16.63■□□□□ 0.25
PMS1-221ENST00000624204 ADAMTS1Q9UHI8 967 aa16.63■□□□□ 0.25
PMS1-221ENST00000624204 AMACRQ9UHK6 382 aa16.63■□□□□ 0.25
PMS1-221ENST00000624204 ATRNO75882 1429 aa16.63■□□□□ 0.25
PMS1-221ENST00000624204 CCDC194A0A1B0GVG4 234 aa16.63■□□□□ 0.25
PMS1-221ENST00000624204 GRID2IPA4D2P6 1211 aa16.63■□□□□ 0.25
PMS1-221ENST00000624204 PDE8BO95263 885 aa16.63■□□□□ 0.25
PMS1-221ENST00000624204 SCG2P13521 617 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms