RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 MSH4O15457 936 aa18.23■□□□□ 0.51
LDB3-208ENST00000623007 ARHGAP6O43182 974 aa18.23■□□□□ 0.51
LDB3-208ENST00000623007 FLOT1O75955 427 aa18.23■□□□□ 0.51
LDB3-208ENST00000623007 PTPRAP18433 802 aa18.23■□□□□ 0.51
LDB3-208ENST00000623007 VCAM1P19320 739 aa18.23■□□□□ 0.51
LDB3-208ENST00000623007 HOXA13P31271 388 aaPredicted RBP18.23■□□□□ 0.51
LDB3-208ENST00000623007 PRELPP51888 382 aa18.23■□□□□ 0.51
LDB3-208ENST00000623007 SPIRE1Q08AE8 756 aa18.23■□□□□ 0.51
LDB3-208ENST00000623007 TTI2Q6NXR4 508 aa18.23■□□□□ 0.51
LDB3-208ENST00000623007 ARMCX5Q6P1M9 558 aa18.23■□□□□ 0.51
LDB3-208ENST00000623007 APTXQ7Z2E3 356 aaKnown RBP18.23■□□□□ 0.51
LDB3-208ENST00000623007 WRNIP1Q96S55 665 aa18.23■□□□□ 0.51
LDB3-208ENST00000623007 RIT2Q99578 217 aa18.23■□□□□ 0.51
LDB3-208ENST00000623007 KCND2Q9NZV8 630 aa18.23■□□□□ 0.51
LDB3-208ENST00000623007 KIAA1024Q9UPX6 916 aa18.23■□□□□ 0.51
LDB3-208ENST00000623007 RBBP6Q7Z6E9 1792 aaKnown RBP18.23■□□□□ 0.51
LDB3-208ENST00000623007 PLA2G4BP0C869 781 aa18.22■□□□□ 0.51
LDB3-208ENST00000623007 EHHADHQ08426 723 aa18.22■□□□□ 0.51
LDB3-208ENST00000623007 MTMR2Q13614 643 aa18.22■□□□□ 0.51
LDB3-208ENST00000623007 TKFCQ3LXA3 575 aa18.22■□□□□ 0.51
LDB3-208ENST00000623007 CENPPQ6IPU0 288 aa18.22■□□□□ 0.51
LDB3-208ENST00000623007 CSGALNACT2Q8N6G5 542 aa18.22■□□□□ 0.51
LDB3-208ENST00000623007 SLC5A5Q92911 643 aa18.22■□□□□ 0.51
LDB3-208ENST00000623007 PANX2Q96RD6 677 aa18.22■□□□□ 0.51
LDB3-208ENST00000623007 GLIS2Q9BZE0 524 aaPredicted RBP18.22■□□□□ 0.51
LDB3-208ENST00000623007 TMX1Q9H3N1 280 aa18.22■□□□□ 0.51
LDB3-208ENST00000623007 ZNF536O15090 1300 aa18.22■□□□□ 0.51
LDB3-208ENST00000623007 RPTORQ8N122 1335 aa18.22■□□□□ 0.51
LDB3-208ENST00000623007 A0A1W2PQC6 194 aa18.22■□□□□ 0.51
LDB3-208ENST00000623007 INPP5BP32019 993 aa18.22■□□□□ 0.51
LDB3-208ENST00000623007 COPB1P53618 953 aaKnown RBP18.22■□□□□ 0.51
LDB3-208ENST00000623007 KRT31Q15323 416 aa18.22■□□□□ 0.51
LDB3-208ENST00000623007 LRRC15Q8TF66 581 aa18.22■□□□□ 0.51
LDB3-208ENST00000623007 KLRG1Q96E93 195 aa18.22■□□□□ 0.51
LDB3-208ENST00000623007 RPAP3Q9H6T3 665 aaPredicted RBP18.22■□□□□ 0.51
LDB3-208ENST00000623007 INTS13Q9NVM9 706 aa18.22■□□□□ 0.51
LDB3-208ENST00000623007 GGA3Q9NZ52 723 aa18.22■□□□□ 0.51
LDB3-208ENST00000623007 TMOD4Q9NZQ9 345 aa18.22■□□□□ 0.51
LDB3-208ENST00000623007 LOXHD1Q8IVV2 1947 aa18.21■□□□□ 0.51
LDB3-208ENST00000623007 SBF1O95248 1867 aa18.21■□□□□ 0.51
LDB3-208ENST00000623007 FRMPD4Q14CM0 1322 aa18.21■□□□□ 0.51
LDB3-208ENST00000623007 AKR1B15C9JRZ8 316 aaPredicted RBP18.21■□□□□ 0.51
LDB3-208ENST00000623007 MEIS1O00470 390 aa18.21■□□□□ 0.51
LDB3-208ENST00000623007 ZSCAN12O43309 604 aa18.21■□□□□ 0.51
LDB3-208ENST00000623007 PBX1P40424 430 aa18.21■□□□□ 0.51
LDB3-208ENST00000623007 DNM2P50570 870 aa18.21■□□□□ 0.51
LDB3-208ENST00000623007 SPP2Q13103 211 aa18.21■□□□□ 0.51
LDB3-208ENST00000623007 LRCH2Q5VUJ6 765 aa18.21■□□□□ 0.51
LDB3-208ENST00000623007 NCAPH2Q6IBW4 605 aa18.21■□□□□ 0.51
LDB3-208ENST00000623007 PPP4R3CPQ6ZMV5 832 aa18.21■□□□□ 0.51
LDB3-208ENST00000623007 SYT2Q8N9I0 419 aaPredicted RBP18.21■□□□□ 0.51
LDB3-208ENST00000623007 RETREG2Q8NC44 543 aa18.21■□□□□ 0.51
LDB3-208ENST00000623007 NUP58Q9BVL2 599 aa18.21■□□□□ 0.51
LDB3-208ENST00000623007 EMILIN3Q9NT22 766 aa18.21■□□□□ 0.51
LDB3-208ENST00000623007 PANK4Q9NVE7 773 aa18.21■□□□□ 0.51
LDB3-208ENST00000623007 FBXO28Q9NVF7 368 aa18.21■□□□□ 0.51
LDB3-208ENST00000623007 VAV3Q9UKW4 847 aa18.21■□□□□ 0.51
LDB3-208ENST00000623007 PAXBP1Q9Y5B6 917 aa18.21■□□□□ 0.51
LDB3-208ENST00000623007 ATP2A1O14983 1001 aa18.2■□□□□ 0.5
LDB3-208ENST00000623007 GAS7O60861 476 aa18.2■□□□□ 0.5
LDB3-208ENST00000623007 IDEP14735 1019 aa18.2■□□□□ 0.5
LDB3-208ENST00000623007 STK4Q13043 487 aa18.2■□□□□ 0.5
LDB3-208ENST00000623007 PCNX4Q63HM2 1172 aa18.2■□□□□ 0.5
LDB3-208ENST00000623007 CATSPER3Q86XQ3 398 aa18.2■□□□□ 0.5
LDB3-208ENST00000623007 MYOCDQ8IZQ8 938 aa18.2■□□□□ 0.5
LDB3-208ENST00000623007 P2RX7Q99572 595 aaKnown RBP18.2■□□□□ 0.5
LDB3-208ENST00000623007 NUDT12Q9BQG2 462 aa18.2■□□□□ 0.5
LDB3-208ENST00000623007 MXRA8Q9BRK3 442 aa18.2■□□□□ 0.5
LDB3-208ENST00000623007 TEKT3Q9BXF9 490 aa18.2■□□□□ 0.5
LDB3-208ENST00000623007 SRRTQ9BXP5 876 aaKnown RBP18.2■□□□□ 0.5
LDB3-208ENST00000623007 FRMD3A2A2Y4 597 aa18.19■□□□□ 0.5
LDB3-208ENST00000623007 PSMD10O75832 226 aa18.19■□□□□ 0.5
LDB3-208ENST00000623007 EYA4O95677 639 aa18.19■□□□□ 0.5
LDB3-208ENST00000623007 GNA14O95837 355 aa18.19■□□□□ 0.5
LDB3-208ENST00000623007 KRT18P05783 430 aaKnown RBP18.19■□□□□ 0.5
LDB3-208ENST00000623007 COG2Q14746 738 aa18.19■□□□□ 0.5
LDB3-208ENST00000623007 FAM26FQ5R3K3 315 aa18.19■□□□□ 0.5
LDB3-208ENST00000623007 OTOP1Q7RTM1 612 aa18.19■□□□□ 0.5
LDB3-208ENST00000623007 CCAR2Q8N163 923 aaKnown RBP18.19■□□□□ 0.5
LDB3-208ENST00000623007 DCPSQ96C86 337 aaKnown RBP18.19■□□□□ 0.5
LDB3-208ENST00000623007 DNAJC19Q96DA6 116 aa18.19■□□□□ 0.5
LDB3-208ENST00000623007 BAG1Q99933 345 aaPredicted RBP18.19■□□□□ 0.5
LDB3-208ENST00000623007 HOXC10Q9NYD6 342 aa18.19■□□□□ 0.5
LDB3-208ENST00000623007 ZC3H4Q9UPT8 1303 aaKnown RBP18.19■□□□□ 0.5
LDB3-208ENST00000623007 POTEB3A0JP26 581 aa18.18■□□□□ 0.5
LDB3-208ENST00000623007 LGALS16A8MUM7 142 aa18.18■□□□□ 0.5
LDB3-208ENST00000623007 POTECB2RU33 542 aa18.18■□□□□ 0.5
LDB3-208ENST00000623007 MAFGO15525 162 aa18.18■□□□□ 0.5
LDB3-208ENST00000623007 SLC12A3P55017 1021 aa18.18■□□□□ 0.5
LDB3-208ENST00000623007 COASYQ13057 564 aa18.18■□□□□ 0.5
LDB3-208ENST00000623007 PTPN14Q15678 1187 aa18.18■□□□□ 0.5
LDB3-208ENST00000623007 SH3D19Q5HYK7 790 aa18.18■□□□□ 0.5
LDB3-208ENST00000623007 POTEBQ6S5H4 581 aa18.18■□□□□ 0.5
LDB3-208ENST00000623007 DYMQ7RTS9 669 aa18.18■□□□□ 0.5
LDB3-208ENST00000623007 GPBP1Q86WP2 473 aa18.18■□□□□ 0.5
LDB3-208ENST00000623007 KIAA0895Q8NCT3 520 aa18.18■□□□□ 0.5
LDB3-208ENST00000623007 TRPM4Q8TD43 1214 aa18.18■□□□□ 0.5
LDB3-208ENST00000623007 CLEC4DQ8WXI8 215 aa18.18■□□□□ 0.5
LDB3-208ENST00000623007 ZNF577Q9BSK1 485 aa18.18■□□□□ 0.5
LDB3-208ENST00000623007 ADAMTS5Q9UNA0 930 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms