RNA–Protein interactions for RNA: ENST00000622645.4

TP53-227, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,653 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-227ENST00000622645 EIF3CLB5ME19 914 aaKnown RBP13.29□□□□□ -0.28
TP53-227ENST00000622645 ZNF263O14978 683 aa13.29□□□□□ -0.28
TP53-227ENST00000622645 SRGAP2O75044 1071 aa13.29□□□□□ -0.28
TP53-227ENST00000622645 JAG1P78504 1218 aa13.29□□□□□ -0.28
TP53-227ENST00000622645 PSMD2Q13200 908 aa13.29□□□□□ -0.28
TP53-227ENST00000622645 USH1GQ495M9 461 aa13.29□□□□□ -0.28
TP53-227ENST00000622645 CCDC170Q8IYT3 715 aa13.29□□□□□ -0.28
TP53-227ENST00000622645 MYOCDQ8IZQ8 938 aa13.29□□□□□ -0.28
TP53-227ENST00000622645 NOA1Q8NC60 698 aaKnown RBP13.29□□□□□ -0.28
TP53-227ENST00000622645 DCAF4Q8WV16 495 aa13.29□□□□□ -0.28
TP53-227ENST00000622645 EIF3CQ99613 913 aaKnown RBP13.29□□□□□ -0.28
TP53-227ENST00000622645 TDRD3Q9H7E2 651 aaKnown RBP13.29□□□□□ -0.28
TP53-227ENST00000622645 CCDC151A5D8V7 595 aa13.29□□□□□ -0.28
TP53-227ENST00000622645 KRT86O43790 486 aa13.29□□□□□ -0.28
TP53-227ENST00000622645 IPO7O95373 1038 aaKnown RBP13.29□□□□□ -0.28
TP53-227ENST00000622645 CHRNA5P30532 468 aa13.29□□□□□ -0.28
TP53-227ENST00000622645 LONRF2Q1L5Z9 754 aa13.29□□□□□ -0.28
TP53-227ENST00000622645 FAM26FQ5R3K3 315 aa13.29□□□□□ -0.28
TP53-227ENST00000622645 TATDN1Q6P1N9 297 aa13.29□□□□□ -0.28
TP53-227ENST00000622645 TRAPPC11Q7Z392 1133 aa13.29□□□□□ -0.28
TP53-227ENST00000622645 CCDC42Q96M95 316 aa13.29□□□□□ -0.28
TP53-227ENST00000622645 MRIQ9BWK5 157 aa13.29□□□□□ -0.28
TP53-227ENST00000622645 FUT8Q9BYC5 575 aa13.29□□□□□ -0.28
TP53-227ENST00000622645 KCNMB3Q9NPA1 279 aa13.29□□□□□ -0.28
TP53-227ENST00000622645 ARHGAP20Q9P2F6 1191 aa13.29□□□□□ -0.28
TP53-227ENST00000622645 PLAGL2Q9UPG8 496 aa13.29□□□□□ -0.28
TP53-227ENST00000622645 COL11A2P13942 1736 aaPredicted RBP13.29□□□□□ -0.28
TP53-227ENST00000622645 NRXN2Q9P2S2 1712 aa13.29□□□□□ -0.28
TP53-227ENST00000622645 MACROD2A1Z1Q3 448 aa13.28□□□□□ -0.28
TP53-227ENST00000622645 FGFR1OPO95684 399 aaKnown RBP13.28□□□□□ -0.28
TP53-227ENST00000622645 PLA2G4BP0C869 781 aa13.28□□□□□ -0.28
TP53-227ENST00000622645 USP11P51784 963 aa13.28□□□□□ -0.28
TP53-227ENST00000622645 IKQ13123 557 aaPredicted RBP13.28□□□□□ -0.28
TP53-227ENST00000622645 NELFCDQ8IXH7 590 aa13.28□□□□□ -0.28
TP53-227ENST00000622645 ZBTB9Q96C00 473 aa13.28□□□□□ -0.28
TP53-227ENST00000622645 TANGO6Q9C0B7 1094 aa13.28□□□□□ -0.28
TP53-227ENST00000622645 NT5C3AQ9H0P0 336 aa13.28□□□□□ -0.28
TP53-227ENST00000622645 BMP2KQ9NSY1 1161 aaPredicted RBP13.28□□□□□ -0.28
TP53-227ENST00000622645 GREB1LQ9C091 1923 aaPredicted RBP13.28□□□□□ -0.28
TP53-227ENST00000622645 TRAF5O00463 557 aa13.28□□□□□ -0.28
TP53-227ENST00000622645 PLSCR1O15162 318 aa13.28□□□□□ -0.28
TP53-227ENST00000622645 ATP8B1O43520 1251 aa13.28□□□□□ -0.28
TP53-227ENST00000622645 MED24O75448 989 aa13.28□□□□□ -0.28
TP53-227ENST00000622645 KIF20AO95235 890 aa13.28□□□□□ -0.28
TP53-227ENST00000622645 NDUFB10O96000 172 aa13.28□□□□□ -0.28
TP53-227ENST00000622645 ARHGAP4P98171 946 aa13.28□□□□□ -0.28
TP53-227ENST00000622645 AOC3Q16853 763 aa13.28□□□□□ -0.28
TP53-227ENST00000622645 ABCB5Q2M3G0 1257 aa13.28□□□□□ -0.28
TP53-227ENST00000622645 PRR16Q569H4 304 aa13.28□□□□□ -0.28
TP53-227ENST00000622645 HYIQ5T013 277 aa13.28□□□□□ -0.28
TP53-227ENST00000622645 MSANTD4Q8NCY6 345 aa13.28□□□□□ -0.28
TP53-227ENST00000622645 TSG101Q99816 390 aa13.28□□□□□ -0.28
TP53-227ENST00000622645 POTEFA5A3E0 1075 aa13.27□□□□□ -0.28
TP53-227ENST00000622645 H0YIN7 160 aa13.27□□□□□ -0.28
TP53-227ENST00000622645 POLR3GO15318 223 aaPredicted RBP13.27□□□□□ -0.28
TP53-227ENST00000622645 POTEIP0CG38 1075 aa13.27□□□□□ -0.28
TP53-227ENST00000622645 BRD3Q15059 726 aa13.27□□□□□ -0.28
TP53-227ENST00000622645 ZCWPW2Q504Y3 356 aa13.27□□□□□ -0.28
TP53-227ENST00000622645 HERC4Q5GLZ8 1057 aaPredicted RBP13.27□□□□□ -0.28
TP53-227ENST00000622645 POTEGQ6S5H5 508 aa13.27□□□□□ -0.28
TP53-227ENST00000622645 POTEEQ6S8J3 1075 aa13.27□□□□□ -0.28
TP53-227ENST00000622645 TMEM179Q6ZVK1 233 aa13.27□□□□□ -0.28
TP53-227ENST00000622645 RRAGAQ7L523 313 aa13.27□□□□□ -0.28
TP53-227ENST00000622645 CCDC84Q86UT8 332 aaPredicted RBP13.27□□□□□ -0.28
TP53-227ENST00000622645 GPBP1Q86WP2 473 aa13.27□□□□□ -0.28
TP53-227ENST00000622645 SMCR8Q8TEV9 937 aaPredicted RBP13.27□□□□□ -0.28
TP53-227ENST00000622645 AMNQ9BXJ7 453 aa13.27□□□□□ -0.28
TP53-227ENST00000622645 GLT8D2Q9H1C3 349 aa13.27□□□□□ -0.28
TP53-227ENST00000622645 ZCCHC17Q9NP64 241 aaKnown RBP13.27□□□□□ -0.28
TP53-227ENST00000622645 SAR1BQ9Y6B6 198 aa13.27□□□□□ -0.28
TP53-227ENST00000622645 KDM3AQ9Y4C1 1321 aa13.27□□□□□ -0.28
TP53-227ENST00000622645 LRRC53A6NM62 1247 aa13.27□□□□□ -0.29
TP53-227ENST00000622645 GH2P01242 217 aa13.27□□□□□ -0.29
TP53-227ENST00000622645 CYP11B2P19099 503 aa13.27□□□□□ -0.29
TP53-227ENST00000622645 HDLBPQ00341 1268 aaKnown RBP13.27□□□□□ -0.29
TP53-227ENST00000622645 CDK17Q00537 523 aa13.27□□□□□ -0.29
TP53-227ENST00000622645 FKBP3Q00688 224 aaKnown RBP13.27□□□□□ -0.29
TP53-227ENST00000622645 RRP1BQ14684 758 aaKnown RBP13.27□□□□□ -0.29
TP53-227ENST00000622645 ZNF662Q6ZS27 426 aa13.27□□□□□ -0.29
TP53-227ENST00000622645 SPICE1Q8N0Z3 855 aa13.27□□□□□ -0.29
TP53-227ENST00000622645 PRMT6Q96LA8 375 aaPredicted RBP13.27□□□□□ -0.29
TP53-227ENST00000622645 NAP1L4Q99733 375 aaKnown RBP13.27□□□□□ -0.29
TP53-227ENST00000622645 ZHX3Q9H4I2 956 aa13.27□□□□□ -0.29
TP53-227ENST00000622645 SUGCTQ9HAC7 445 aa13.27□□□□□ -0.29
TP53-227ENST00000622645 RAB21Q9UL25 225 aa13.27□□□□□ -0.29
TP53-227ENST00000622645 SCN9AQ15858 1988 aa13.27□□□□□ -0.29
TP53-227ENST00000622645 CYP3A7-CYP3A51PA0A087WV96 503 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 CYP3A7P24462 503 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 HNRNPH3P31942 346 aaKnown RBP13.26□□□□□ -0.29
TP53-227ENST00000622645 VSNL1P62760 191 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 KCNMA1Q12791 1236 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 KIF5AQ12840 1032 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 SPA17Q15506 151 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 BEND6Q5SZJ8 279 aaPredicted RBP13.26□□□□□ -0.29
TP53-227ENST00000622645 CRYGNQ8WXF5 182 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 CAPZA3Q96KX2 299 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 MMS19Q96T76 1030 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 RNF216Q9NWF9 866 aaPredicted RBP13.26□□□□□ -0.29
TP53-227ENST00000622645 SERPINA10Q9UK55 444 aa13.26□□□□□ -0.29
TP53-227ENST00000622645 PCDHA2Q9Y5H9 948 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms