RNA–Protein interactions for RNA: ENST00000621990.4

PDPN-212, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDPN, Length 2,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-212ENST00000621990 SERPINA10Q9UK55 444 aa10.48□□□□□ -0.73
PDPN-212ENST00000621990 PCDHA1Q9Y5I3 950 aa10.48□□□□□ -0.73
PDPN-212ENST00000621990 ZNF263O14978 683 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 EPHB6O15197 1021 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 TFRCP02786 760 aaKnown RBP10.47□□□□□ -0.73
PDPN-212ENST00000621990 MMP10P09238 476 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 SLC1A4P43007 532 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 MMP14P50281 582 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 VAV2P52735 878 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 SPIRE1Q08AE8 756 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 CDC37Q16543 378 aaPredicted RBP10.47□□□□□ -0.73
PDPN-212ENST00000621990 CERKLQ49MI3 558 aaPredicted RBP10.47□□□□□ -0.73
PDPN-212ENST00000621990 SLFN13Q68D06 897 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 WDR93Q6P2C0 686 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 TMEM179Q6ZVK1 233 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 SLFN12Q8IYM2 578 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 GLIS3Q8NEA6 775 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 BAP1Q92560 729 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 TSG101Q99816 390 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 ANO3Q9BYT9 981 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 SYNPO2Q9UMS6 1093 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 SLX4Q8IY92 1834 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 USP17L15C9J2P7 530 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 USP17L13C9JLJ4 530 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 USP17L11C9JVI0 530 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 USP17L18D6R9N7 530 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 USP17L22D6RA61 530 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 USP17L17D6RBQ6 530 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 USP17L19D6RCP7 530 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 USP17L20D6RJB6 530 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 TBX3O15119 743 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 IPO7O95373 1038 aaKnown RBP10.47□□□□□ -0.73
PDPN-212ENST00000621990 ATP1A1P05023 1023 aaKnown RBP10.47□□□□□ -0.73
PDPN-212ENST00000621990 SLURP2P0DP57 97 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 FKBP3Q00688 224 aaKnown RBP10.47□□□□□ -0.73
PDPN-212ENST00000621990 USP17L24Q0WX57 530 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 STYK1Q6J9G0 422 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 USP17L6PQ6QN14 398 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 KIAA1328Q86T90 577 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 ETNPPLQ8TBG4 499 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 RPGRIP1Q96KN7 1286 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 CEP63Q96MT8 703 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 DBNDD1Q9H9R9 158 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 PANK4Q9NVE7 773 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 ARHGAP20Q9P2F6 1191 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 SAR1BQ9Y6B6 198 aa10.47□□□□□ -0.73
PDPN-212ENST00000621990 PSME4Q14997 1843 aa10.46□□□□□ -0.73
PDPN-212ENST00000621990 PITPNM2Q9BZ72 1349 aa10.46□□□□□ -0.73
PDPN-212ENST00000621990 IDEP14735 1019 aa10.46□□□□□ -0.73
PDPN-212ENST00000621990 ATP2B2Q01814 1243 aa10.46□□□□□ -0.73
PDPN-212ENST00000621990 SHROOM1Q2M3G4 852 aaPredicted RBP10.46□□□□□ -0.73
PDPN-212ENST00000621990 Q4G0T1 1027 aa10.46□□□□□ -0.73
PDPN-212ENST00000621990 FAM26FQ5R3K3 315 aa10.46□□□□□ -0.73
PDPN-212ENST00000621990 TEX2Q8IWB9 1127 aa10.46□□□□□ -0.73
PDPN-212ENST00000621990 GJA10Q969M2 543 aa10.46□□□□□ -0.73
PDPN-212ENST00000621990 P2RX7Q99572 595 aaKnown RBP10.46□□□□□ -0.73
PDPN-212ENST00000621990 TFR2Q9UP52 801 aa10.46□□□□□ -0.73
PDPN-212ENST00000621990 PCDHAC2Q9Y5I4 1007 aa10.46□□□□□ -0.73
PDPN-212ENST00000621990 RGPD3A6NKT7 1758 aaPredicted RBP10.46□□□□□ -0.74
PDPN-212ENST00000621990 RGPD4Q7Z3J3 1758 aa10.46□□□□□ -0.74
PDPN-212ENST00000621990 G3V3G9 751 aa10.46□□□□□ -0.74
PDPN-212ENST00000621990 PLA2G4BP0C869 781 aa10.46□□□□□ -0.74
PDPN-212ENST00000621990 SLC12A3P55017 1021 aa10.46□□□□□ -0.74
PDPN-212ENST00000621990 ASTE1Q2TB18 679 aaPredicted RBP10.46□□□□□ -0.74
PDPN-212ENST00000621990 DCAF8Q5TAQ9 597 aa10.46□□□□□ -0.74
PDPN-212ENST00000621990 NCAPH2Q6IBW4 605 aa10.46□□□□□ -0.74
PDPN-212ENST00000621990 NOA1Q8NC60 698 aaKnown RBP10.46□□□□□ -0.74
PDPN-212ENST00000621990 LENG9Q96B70 501 aa10.46□□□□□ -0.74
PDPN-212ENST00000621990 CCDC42Q96M95 316 aa10.46□□□□□ -0.74
PDPN-212ENST00000621990 PCMTD1Q96MG8 357 aaPredicted RBP10.46□□□□□ -0.74
PDPN-212ENST00000621990 BMP2KQ9NSY1 1161 aaPredicted RBP10.46□□□□□ -0.74
PDPN-212ENST00000621990 L1RE1Q9UN81 338 aa10.46□□□□□ -0.74
PDPN-212ENST00000621990 COL4A3BPQ9Y5P4 624 aa10.46□□□□□ -0.74
PDPN-212ENST00000621990 ERLIN1O75477 346 aa10.45□□□□□ -0.74
PDPN-212ENST00000621990 GNA14O95837 355 aa10.45□□□□□ -0.74
PDPN-212ENST00000621990 CYP11B2P19099 503 aa10.45□□□□□ -0.74
PDPN-212ENST00000621990 CACNB3P54284 484 aa10.45□□□□□ -0.74
PDPN-212ENST00000621990 ICA1Q05084 483 aa10.45□□□□□ -0.74
PDPN-212ENST00000621990 KIF5AQ12840 1032 aa10.45□□□□□ -0.74
PDPN-212ENST00000621990 SMC1AQ14683 1233 aaKnown RBP10.45□□□□□ -0.74
PDPN-212ENST00000621990 BTNL9Q6UXG8 535 aa10.45□□□□□ -0.74
PDPN-212ENST00000621990 KIAA0825Q8IV33 1275 aa10.45□□□□□ -0.74
PDPN-212ENST00000621990 CCDC65Q8IXS2 484 aa10.45□□□□□ -0.74
PDPN-212ENST00000621990 SYN2Q92777 582 aaPredicted RBP10.45□□□□□ -0.74
PDPN-212ENST00000621990 AMNQ9BXJ7 453 aa10.45□□□□□ -0.74
PDPN-212ENST00000621990 KCTD10Q9H3F6 313 aa10.45□□□□□ -0.74
PDPN-212ENST00000621990 FAM207AQ9NSI2 230 aaPredicted RBP10.45□□□□□ -0.74
PDPN-212ENST00000621990 HDAC6Q9UBN7 1215 aa10.45□□□□□ -0.74
PDPN-212ENST00000621990 KIAA1024Q9UPX6 916 aa10.45□□□□□ -0.74
PDPN-212ENST00000621990 E9PMD0 336 aa10.45□□□□□ -0.74
PDPN-212ENST00000621990 F5H6K3 240 aa10.45□□□□□ -0.74
PDPN-212ENST00000621990 RBAK-RBAKDNI3L0D1 243 aa10.45□□□□□ -0.74
PDPN-212ENST00000621990 ENC1O14682 589 aa10.45□□□□□ -0.74
PDPN-212ENST00000621990 ECE2O60344 883 aa10.45□□□□□ -0.74
PDPN-212ENST00000621990 PLEKP08567 350 aaPredicted RBP10.45□□□□□ -0.74
PDPN-212ENST00000621990 CIITAP33076 1130 aa10.45□□□□□ -0.74
PDPN-212ENST00000621990 SREBF1P36956 1147 aa10.45□□□□□ -0.74
PDPN-212ENST00000621990 VSNL1P62760 191 aa10.45□□□□□ -0.74
PDPN-212ENST00000621990 ARHGAP4P98171 946 aa10.45□□□□□ -0.74
PDPN-212ENST00000621990 KLRC3Q07444 240 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms