RNA–Protein interactions for RNA: ENST00000620916.2

MATR3-228, Transcript of matrin 3, humanhuman

TSL 5 BASIC

Gene MATR3, Length 3,134 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-228ENST00000620916 TTC7AQ9ULT0 858 aaPredicted RBP5.63□□□□□ -1.51
MATR3-228ENST00000620916 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.63□□□□□ -1.51
MATR3-228ENST00000620916 AK9Q5TCS8 1911 aa5.63□□□□□ -1.51
MATR3-228ENST00000620916 CDHR2Q9BYE9 1310 aa5.63□□□□□ -1.51
MATR3-228ENST00000620916 TSPAN1O60635 241 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 LDHAP00338 332 aaKnown RBP5.62□□□□□ -1.51
MATR3-228ENST00000620916 BPIFB4P59827 614 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 PDE1BQ01064 536 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 NCAPH2Q6IBW4 605 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 CCDC121Q6ZUS5 278 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 LILRB2Q8N423 598 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 LILRB1Q8NHL6 650 aaPredicted RBP5.62□□□□□ -1.51
MATR3-228ENST00000620916 STK32AQ8WU08 396 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 IP6K1Q92551 441 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 USP6NLQ92738 828 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 NUP58Q9BVL2 599 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 VCX3AQ9NNX9 186 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 LINC00854A0A1B0GVQ3 168 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 TMEM88BA6NKF7 163 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 PIK3CDO00329 1044 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 SPTLC1O15269 473 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 CYP1A2P05177 515 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 CD9P21926 228 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 MCM2P49736 904 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 IRAK1P51617 712 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 GSDMDP57764 484 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 ETF1P62495 437 aaKnown RBP5.62□□□□□ -1.51
MATR3-228ENST00000620916 GPSM2P81274 684 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 MSLNQ13421 630 aaPredicted RBP5.62□□□□□ -1.51
MATR3-228ENST00000620916 KCTD2Q14681 263 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 PPP2R5BQ15173 497 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 C3orf67Q6ZVT6 689 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 NLRP9Q7RTR0 991 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 SRGAP1Q7Z6B7 1085 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 GRAMD2AQ8IUY3 354 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 RDH13Q8NBN7 331 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 LRRN4CLQ8ND94 238 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 ANKRD49Q8WVL7 239 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 AZIN2Q96A70 460 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 IFT43Q96FT9 208 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 SNF8Q96H20 258 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 RPGRIP1Q96KN7 1286 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 UROC1Q96N76 676 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 KRT82Q9NSB4 513 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 SUCLA2Q9P2R7 463 aaPredicted RBP5.62□□□□□ -1.51
MATR3-228ENST00000620916 CTNNAL1Q9UBT7 734 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 MKL2Q9ULH7 1088 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 C2CD2Q9Y426 696 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 LTN1O94822 1766 aa5.62□□□□□ -1.51
MATR3-228ENST00000620916 KDM6AO15550 1401 aaPredicted RBP5.61□□□□□ -1.51
MATR3-228ENST00000620916 TRIM43BA6NCK2 446 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 USP27XA6NNY8 438 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 UBL4AP11441 157 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 PSMA3P25788 255 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 TNNI2P48788 182 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 GUCY2FP51841 1108 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 PRSS12P56730 875 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 SEPT6Q14141 434 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 PROX2Q3B8N5 592 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 TBC1D9Q6ZT07 1266 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 RELL1Q8IUW5 271 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 NLGN1Q8N2Q7 840 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 ERP27Q96DN0 273 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 MPHOSPH8Q99549 860 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 NDNQ99608 321 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 CENPOQ9BU64 300 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 VPS33BQ9H267 617 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 ZBTB40Q9NUA8 1239 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.61□□□□□ -1.514e-7■□□□□ 9.3
MATR3-228ENST00000620916 CHPF2Q9P2E5 772 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 UBR3Q6ZT12 1888 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 GRIN2DO15399 1336 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 FOXD2O60548 495 aaPredicted RBP5.61□□□□□ -1.51
MATR3-228ENST00000620916 B3GALNT1O75752 331 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 POTEIP0CG38 1075 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 CCDC192P0DO97 292 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 PDHBP11177 359 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 ACADSBP45954 432 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 SKOR1P84550 965 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 DPYSQ14117 519 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 LACTB2Q53H82 288 aaPredicted RBP5.61□□□□□ -1.51
MATR3-228ENST00000620916 CFAP58Q5T655 872 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 KIRREL3Q8IZU9 778 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 ARHGAP18Q8N392 663 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 SPERTQ8NA61 448 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 GSDMBQ8TAX9 411 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 ZFPM2Q8WW38 1151 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 ITPKCQ96DU7 683 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 ZNF570Q96NI8 536 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 HNRNPABQ99729 332 aaKnown RBP5.61□□□□□ -1.51
MATR3-228ENST00000620916 FAM192AQ9GZU8 254 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 INIPQ9NRY2 104 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 TYW1Q9NV66 732 aaKnown RBP5.61□□□□□ -1.51
MATR3-228ENST00000620916 CCDC87Q9NVE4 849 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 NOP53Q9NZM5 478 aaKnown RBP5.61□□□□□ -1.51
MATR3-228ENST00000620916 NDUFA13Q9P0J0 144 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 SCHIP1Q9P0W5 487 aaPredicted RBP5.61□□□□□ -1.51
MATR3-228ENST00000620916 EDC4Q6P2E9 1401 aaKnown RBP5.61□□□□□ -1.51
MATR3-228ENST00000620916 SCN11AQ9UI33 1791 aa5.61□□□□□ -1.51
MATR3-228ENST00000620916 DYTNA2CJ06 578 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms