RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 ZBED4O75132 1171 aa15.22■□□□□ 0.03
CNOT3-210ENST00000618939 GAP43P17677 238 aa15.22■□□□□ 0.03
CNOT3-210ENST00000618939 ILDR1Q86SU0 546 aaPredicted RBP15.22■□□□□ 0.03
CNOT3-210ENST00000618939 DPH5Q9H2P9 285 aa15.22■□□□□ 0.03
CNOT3-210ENST00000618939 PODXL2Q9NZ53 605 aa15.22■□□□□ 0.03
CNOT3-210ENST00000618939 ADAMTS1Q9UHI8 967 aa15.22■□□□□ 0.03
CNOT3-210ENST00000618939 ANO9A1A5B4 782 aa15.22■□□□□ 0.03
CNOT3-210ENST00000618939 ALAS1P13196 640 aa15.22■□□□□ 0.03
CNOT3-210ENST00000618939 APBA1Q02410 837 aa15.22■□□□□ 0.03
CNOT3-210ENST00000618939 STRN3Q13033 797 aa15.22■□□□□ 0.03
CNOT3-210ENST00000618939 FLAD1Q8NFF5 587 aa15.22■□□□□ 0.03
CNOT3-210ENST00000618939 CABS1Q96KC9 395 aa15.22■□□□□ 0.03
CNOT3-210ENST00000618939 STK32BQ9NY57 414 aa15.22■□□□□ 0.03
CNOT3-210ENST00000618939 MST1RQ04912 1400 aa15.22■□□□□ 0.03
CNOT3-210ENST00000618939 E7EVH7 732 aa15.22■□□□□ 0.03
CNOT3-210ENST00000618939 N4BP1O75113 896 aaKnown RBP15.22■□□□□ 0.03
CNOT3-210ENST00000618939 LIN9Q5TKA1 542 aa15.22■□□□□ 0.03
CNOT3-210ENST00000618939 KRT26Q7Z3Y9 468 aa15.22■□□□□ 0.03
CNOT3-210ENST00000618939 ADSSL1Q8N142 457 aa15.22■□□□□ 0.03
CNOT3-210ENST00000618939 MARCH10Q8NA82 808 aaPredicted RBP15.22■□□□□ 0.03
CNOT3-210ENST00000618939 ZBTB5O15062 677 aa15.22■□□□□ 0.03
CNOT3-210ENST00000618939 PSMC2P35998 433 aaKnown RBP15.22■□□□□ 0.03
CNOT3-210ENST00000618939 UBXN2AP68543 259 aa15.22■□□□□ 0.03
CNOT3-210ENST00000618939 RAD9BQ6WBX8 426 aa15.22■□□□□ 0.03
CNOT3-210ENST00000618939 FBXO33Q7Z6M2 555 aa15.22■□□□□ 0.03
CNOT3-210ENST00000618939 RIMS1Q86UR5 1692 aaKnown RBP15.22■□□□□ 0.03
CNOT3-210ENST00000618939 TOB1P50616 345 aaPredicted RBP15.21■□□□□ 0.03
CNOT3-210ENST00000618939 RAD54LQ92698 747 aa15.21■□□□□ 0.03
CNOT3-210ENST00000618939 SPZ1Q9BXG8 430 aa15.21■□□□□ 0.03
CNOT3-210ENST00000618939 TRIM9Q9C026 710 aa15.21■□□□□ 0.03
CNOT3-210ENST00000618939 MAP3K9P80192 1104 aa15.21■□□□□ 0.03
CNOT3-210ENST00000618939 NAA35Q5VZE5 725 aa15.21■□□□□ 0.03
CNOT3-210ENST00000618939 KCTD16Q68DU8 428 aa15.21■□□□□ 0.03
CNOT3-210ENST00000618939 ADAT2Q7Z6V5 191 aaKnown RBP15.21■□□□□ 0.03
CNOT3-210ENST00000618939 NLRX1Q86UT6 975 aa15.21■□□□□ 0.03
CNOT3-210ENST00000618939 PROM2Q8N271 834 aa15.21■□□□□ 0.03
CNOT3-210ENST00000618939 GUF1Q8N442 669 aaKnown RBP15.21■□□□□ 0.03
CNOT3-210ENST00000618939 PICK1Q9NRD5 415 aa15.21■□□□□ 0.03
CNOT3-210ENST00000618939 NKIRAS1Q9NYS0 192 aa15.21■□□□□ 0.03
CNOT3-210ENST00000618939 ITIH6Q6UXX5 1313 aa15.21■□□□□ 0.03
CNOT3-210ENST00000618939 TDP2O95551 362 aa15.21■□□□□ 0.02
CNOT3-210ENST00000618939 FCER1AP12319 257 aa15.21■□□□□ 0.02
CNOT3-210ENST00000618939 ATP5DP30049 168 aa15.21■□□□□ 0.02
CNOT3-210ENST00000618939 GYS2P54840 703 aa15.21■□□□□ 0.02
CNOT3-210ENST00000618939 NCAPHQ15003 741 aa15.21■□□□□ 0.02
CNOT3-210ENST00000618939 DENND2CQ68D51 928 aa15.21■□□□□ 0.02
CNOT3-210ENST00000618939 PPP4R3CPQ6ZMV5 832 aa15.21■□□□□ 0.02
CNOT3-210ENST00000618939 PPANQ9NQ55 473 aaKnown RBP15.21■□□□□ 0.02
CNOT3-210ENST00000618939 ADAM21Q9UKJ8 722 aa15.21■□□□□ 0.02
CNOT3-210ENST00000618939 LRRC53A6NM62 1247 aa15.2■□□□□ 0.02
CNOT3-210ENST00000618939 ARHGAP25P42331 645 aa15.2■□□□□ 0.02
CNOT3-210ENST00000618939 SYDE2Q5VT97 1194 aa15.2■□□□□ 0.02
CNOT3-210ENST00000618939 CNKSR1Q969H4 720 aa15.2■□□□□ 0.02
CNOT3-210ENST00000618939 CHP1Q99653 195 aa15.2■□□□□ 0.02
CNOT3-210ENST00000618939 CAPN11Q9UMQ6 739 aa15.2■□□□□ 0.02
CNOT3-210ENST00000618939 LMNB1P20700 586 aa15.2■□□□□ 0.02
CNOT3-210ENST00000618939 CC2D2BQ6DHV5 1058 aa15.2■□□□□ 0.02
CNOT3-210ENST00000618939 RASGRP2Q7LDG7 609 aa15.2■□□□□ 0.02
CNOT3-210ENST00000618939 PPM1KQ8N3J5 372 aa15.2■□□□□ 0.02
CNOT3-210ENST00000618939 BHMT2Q9H2M3 363 aa15.2■□□□□ 0.02
CNOT3-210ENST00000618939 ZCCHC17Q9NP64 241 aaKnown RBP15.2■□□□□ 0.02
CNOT3-210ENST00000618939 TRPC5Q9UL62 973 aaPredicted RBP15.2■□□□□ 0.02
CNOT3-210ENST00000618939 USP17L15C9J2P7 530 aa15.2■□□□□ 0.02
CNOT3-210ENST00000618939 USP17L13C9JLJ4 530 aa15.2■□□□□ 0.02
CNOT3-210ENST00000618939 USP17L11C9JVI0 530 aa15.2■□□□□ 0.02
CNOT3-210ENST00000618939 USP17L18D6R9N7 530 aa15.2■□□□□ 0.02
CNOT3-210ENST00000618939 USP17L22D6RA61 530 aa15.2■□□□□ 0.02
CNOT3-210ENST00000618939 USP17L17D6RBQ6 530 aa15.2■□□□□ 0.02
CNOT3-210ENST00000618939 USP17L19D6RCP7 530 aa15.2■□□□□ 0.02
CNOT3-210ENST00000618939 USP17L20D6RJB6 530 aa15.2■□□□□ 0.02
CNOT3-210ENST00000618939 NEBLO76041 1014 aa15.2■□□□□ 0.02
CNOT3-210ENST00000618939 TRIM37O94972 964 aa15.2■□□□□ 0.02
CNOT3-210ENST00000618939 USP17L24Q0WX57 530 aa15.2■□□□□ 0.02
CNOT3-210ENST00000618939 FAM102BQ5T8I3 360 aa15.2■□□□□ 0.02
CNOT3-210ENST00000618939 USP17L6PQ6QN14 398 aa15.2■□□□□ 0.02
CNOT3-210ENST00000618939 IPO4Q8TEX9 1081 aaKnown RBP15.2■□□□□ 0.02
CNOT3-210ENST00000618939 IQCGQ9H095 443 aaKnown RBP15.2■□□□□ 0.02
CNOT3-210ENST00000618939 GCNT4Q9P109 453 aa15.2■□□□□ 0.02
CNOT3-210ENST00000618939 TESPA1A2RU30 521 aaPredicted RBP15.2■□□□□ 0.02
CNOT3-210ENST00000618939 PPFIA4O75335 1185 aa15.2■□□□□ 0.02
CNOT3-210ENST00000618939 PRPF6O94906 941 aaKnown RBP15.2■□□□□ 0.02
CNOT3-210ENST00000618939 SLC7A5Q01650 507 aa15.2■□□□□ 0.02
CNOT3-210ENST00000618939 NFIXQ14938 502 aa15.2■□□□□ 0.02
CNOT3-210ENST00000618939 XKR9Q5GH70 373 aa15.2■□□□□ 0.02
CNOT3-210ENST00000618939 DPH6Q7L8W6 267 aa15.2■□□□□ 0.02
CNOT3-210ENST00000618939 CEP57Q86XR8 500 aa15.2■□□□□ 0.02
CNOT3-210ENST00000618939 CCDC127Q96BQ5 260 aa15.2■□□□□ 0.02
CNOT3-210ENST00000618939 HDAC6Q9UBN7 1215 aa15.2■□□□□ 0.02
CNOT3-210ENST00000618939 EIF3CLB5ME19 914 aaKnown RBP15.19■□□□□ 0.02
CNOT3-210ENST00000618939 MYL7Q01449 175 aa15.19■□□□□ 0.02
CNOT3-210ENST00000618939 ANKRD40Q6AI12 368 aa15.19■□□□□ 0.02
CNOT3-210ENST00000618939 MSANTD4Q8NCY6 345 aa15.19■□□□□ 0.02
CNOT3-210ENST00000618939 EIF3CQ99613 913 aaKnown RBP15.19■□□□□ 0.02
CNOT3-210ENST00000618939 ZNF577Q9BSK1 485 aa15.19■□□□□ 0.02
CNOT3-210ENST00000618939 WDR11Q9BZH6 1224 aa15.19■□□□□ 0.02
CNOT3-210ENST00000618939 L2HGDHQ9H9P8 463 aa15.19■□□□□ 0.02
CNOT3-210ENST00000618939 UBR1Q8IWV7 1749 aa15.19■□□□□ 0.02
CNOT3-210ENST00000618939 USP17L10C9JJH3 530 aa15.19■□□□□ 0.02
CNOT3-210ENST00000618939 E9PMD0 336 aa15.19■□□□□ 0.02
CNOT3-210ENST00000618939 GPSM2P81274 684 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms