RNA–Protein interactions for RNA: ENST00000617432.4

CUL3-216, Transcript of cullin 3, humanhuman

TSL 5 BASIC

Gene CUL3, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-216ENST00000617432 PHACTR3Q96KR7 559 aa6.15□□□□□ -1.43
CUL3-216ENST00000617432 SYT17Q9BSW7 474 aa6.15□□□□□ -1.43
CUL3-216ENST00000617432 SRCIN1Q9C0H9 1055 aa6.15□□□□□ -1.43
CUL3-216ENST00000617432 WWC3Q9ULE0 1092 aa6.15□□□□□ -1.43
CUL3-216ENST00000617432 RBM47A0AV96 593 aaKnown RBP6.14□□□□□ -1.43
CUL3-216ENST00000617432 GFRA2O00451 464 aa6.14□□□□□ -1.43
CUL3-216ENST00000617432 C1orf141Q5JVX7 400 aa6.14□□□□□ -1.43
CUL3-216ENST00000617432 NLGN1Q8N2Q7 840 aa6.14□□□□□ -1.43
CUL3-216ENST00000617432 USP40Q9NVE5 1235 aa6.14□□□□□ -1.43
CUL3-216ENST00000617432 SMPD4Q9NXE4 827 aa6.14□□□□□ -1.43
CUL3-216ENST00000617432 SIPA1L3O60292 1781 aaPredicted RBP6.13□□□□□ -1.43
CUL3-216ENST00000617432 ERVV-2B6SEH9 535 aa6.13□□□□□ -1.43
CUL3-216ENST00000617432 RNMTO43148 476 aaKnown RBP6.13□□□□□ -1.43
CUL3-216ENST00000617432 PGRP06401 933 aa6.13□□□□□ -1.43
CUL3-216ENST00000617432 PRKAR2BP31323 418 aa6.13□□□□□ -1.43
CUL3-216ENST00000617432 AMOTQ4VCS5 1084 aa6.13□□□□□ -1.43
CUL3-216ENST00000617432 MCATQ8IVS2 390 aaKnown RBP6.13□□□□□ -1.43
CUL3-216ENST00000617432 SMARCC1Q92922 1105 aaPredicted RBP6.13□□□□□ -1.43
CUL3-216ENST00000617432 SLITRK6Q9H5Y7 841 aa6.13□□□□□ -1.43
CUL3-216ENST00000617432 C1orf115Q9H7X2 142 aa6.13□□□□□ -1.43
CUL3-216ENST00000617432 PCDHA5Q9Y5H7 936 aa6.13□□□□□ -1.43
CUL3-216ENST00000617432 MYH14Q7Z406 1995 aaKnown RBP6.13□□□□□ -1.43
CUL3-216ENST00000617432 UBR2Q8IWV8 1755 aa6.12□□□□□ -1.43
CUL3-216ENST00000617432 PLEKHG2Q9H7P9 1386 aa6.12□□□□□ -1.43
CUL3-216ENST00000617432 ZNF831Q5JPB2 1677 aa6.12□□□□□ -1.43
CUL3-216ENST00000617432 CICQ96RK0 1608 aaPredicted RBP6.12□□□□□ -1.43
CUL3-216ENST00000617432 KCNQ3O43525 872 aa6.12□□□□□ -1.43
CUL3-216ENST00000617432 USP2O75604 605 aaPredicted RBP6.12□□□□□ -1.43
CUL3-216ENST00000617432 MPOP05164 745 aa6.12□□□□□ -1.43
CUL3-216ENST00000617432 CELA3AP09093 270 aa6.12□□□□□ -1.43
CUL3-216ENST00000617432 SDHBP21912 280 aa6.12□□□□□ -1.43
CUL3-216ENST00000617432 TMEM62Q0P6H9 643 aa6.12□□□□□ -1.43
CUL3-216ENST00000617432 DDX10Q13206 875 aaKnown RBP6.12□□□□□ -1.43
CUL3-216ENST00000617432 DCTN1Q14203 1278 aa6.12□□□□□ -1.43
CUL3-216ENST00000617432 CPZQ66K79 652 aa6.12□□□□□ -1.43
CUL3-216ENST00000617432 FERMT3Q86UX7 667 aa6.12□□□□□ -1.43
CUL3-216ENST00000617432 DNAJC10Q8IXB1 793 aa6.12□□□□□ -1.43
CUL3-216ENST00000617432 IL17REQ8NFR9 667 aa6.12□□□□□ -1.43
CUL3-216ENST00000617432 MRIQ9BWK5 157 aa6.12□□□□□ -1.43
CUL3-216ENST00000617432 KLHL14Q9P2G3 628 aa6.12□□□□□ -1.43
CUL3-216ENST00000617432 SRP68Q9UHB9 627 aaKnown RBP6.12□□□□□ -1.43
CUL3-216ENST00000617432 KIAA1551Q9HCM1 1747 aa6.12□□□□□ -1.43
CUL3-216ENST00000617432 MAP3K5Q99683 1374 aa6.11□□□□□ -1.43
CUL3-216ENST00000617432 PNMA6FA0A0J9YX94 578 aa6.11□□□□□ -1.43
CUL3-216ENST00000617432 PRAMEF22A3QJZ6 481 aa6.11□□□□□ -1.43
CUL3-216ENST00000617432 BUB1BO60566 1050 aaPredicted RBP6.11□□□□□ -1.43
CUL3-216ENST00000617432 ITGB3P05106 788 aa6.11□□□□□ -1.43
CUL3-216ENST00000617432 HSP90AB1P08238 724 aaKnown RBP6.11□□□□□ -1.43
CUL3-216ENST00000617432 RNF111Q6ZNA4 994 aa6.11□□□□□ -1.43
CUL3-216ENST00000617432 CEP128Q6ZU80 1094 aa6.11□□□□□ -1.43
CUL3-216ENST00000617432 TMC7Q7Z402 723 aa6.11□□□□□ -1.43
CUL3-216ENST00000617432 RNF141Q8WVD5 230 aa6.11□□□□□ -1.43
CUL3-216ENST00000617432 SLC52A2Q9HAB3 445 aa6.11□□□□□ -1.43
CUL3-216ENST00000617432 ZMYM5Q9UJ78 669 aa6.11□□□□□ -1.43
CUL3-216ENST00000617432 LRRN2O75325 713 aa6.1□□□□□ -1.43
CUL3-216ENST00000617432 U2AF1L5P0DN76 240 aaPredicted RBP6.1□□□□□ -1.43
CUL3-216ENST00000617432 RPL10P27635 214 aaKnown RBP6.1□□□□□ -1.43
CUL3-216ENST00000617432 POLD1P28340 1107 aa6.1□□□□□ -1.43
CUL3-216ENST00000617432 GDF5P43026 501 aa6.1□□□□□ -1.43
CUL3-216ENST00000617432 CRKLP46109 303 aaKnown RBP6.1□□□□□ -1.43
CUL3-216ENST00000617432 PIP4K2AP48426 406 aaPredicted RBP6.1□□□□□ -1.43
CUL3-216ENST00000617432 U2AF1Q01081 240 aaKnown RBP eCLIP6.1□□□□□ -1.43
CUL3-216ENST00000617432 NT5DC1Q5TFE4 455 aa6.1□□□□□ -1.43
CUL3-216ENST00000617432 MCM10Q7L590 875 aa6.1□□□□□ -1.43
CUL3-216ENST00000617432 TMC6Q7Z403 805 aa6.1□□□□□ -1.43
CUL3-216ENST00000617432 MAP6Q96JE9 813 aa6.1□□□□□ -1.43
CUL3-216ENST00000617432 THUMPD2Q9BTF0 503 aaKnown RBP6.1□□□□□ -1.43
CUL3-216ENST00000617432 C1QTNF3Q9BXJ4 246 aa6.1□□□□□ -1.43
CUL3-216ENST00000617432 SCAND2PQ9GZW5 306 aaPredicted RBP6.1□□□□□ -1.43
CUL3-216ENST00000617432 UTRNP46939 3433 aa6.1□□□□□ -1.43
CUL3-216ENST00000617432 GYS1P13807 737 aa6.09□□□□□ -1.43
CUL3-216ENST00000617432 PDE4BQ07343 736 aa6.09□□□□□ -1.43
CUL3-216ENST00000617432 CLEC16AQ2KHT3 1053 aa6.09□□□□□ -1.43
CUL3-216ENST00000617432 CYB5D2Q8WUJ1 264 aa6.09□□□□□ -1.43
CUL3-216ENST00000617432 BIN2Q9UBW5 565 aaPredicted RBP6.09□□□□□ -1.43
CUL3-216ENST00000617432 ADAM30Q9UKF2 790 aa6.09□□□□□ -1.43
CUL3-216ENST00000617432 ZBTB1Q9Y2K1 713 aa6.09□□□□□ -1.43
CUL3-216ENST00000617432 PXDNLA1KZ92 1463 aa6.09□□□□□ -1.44
CUL3-216ENST00000617432 N4BP2Q86UW6 1770 aaPredicted RBP6.09□□□□□ -1.44
CUL3-216ENST00000617432 DLG5Q8TDM6 1919 aa6.09□□□□□ -1.44
CUL3-216ENST00000617432 RPS6KA4O75676 772 aa6.08□□□□□ -1.44
CUL3-216ENST00000617432 MMP10P09238 476 aa6.08□□□□□ -1.44
CUL3-216ENST00000617432 CYP19A1P11511 503 aaPredicted RBP6.08□□□□□ -1.44
CUL3-216ENST00000617432 YY1P25490 414 aa6.08□□□□□ -1.44
CUL3-216ENST00000617432 DDR1Q08345 913 aa6.08□□□□□ -1.44
CUL3-216ENST00000617432 ZNF496Q96IT1 587 aaPredicted RBP6.08□□□□□ -1.44
CUL3-216ENST00000617432 CFAP53Q96M91 514 aa6.08□□□□□ -1.44
CUL3-216ENST00000617432 MIS18AQ9NYP9 233 aa6.08□□□□□ -1.44
CUL3-216ENST00000617432 CEMIPQ8WUJ3 1361 aa6.08□□□□□ -1.44
CUL3-216ENST00000617432 SOS1Q07889 1333 aaPredicted RBP6.08□□□□□ -1.44
CUL3-216ENST00000617432 C10orf71Q711Q0 1435 aa6.08□□□□□ -1.44
CUL3-216ENST00000617432 CYR61O00622 381 aa6.08□□□□□ -1.44
CUL3-216ENST00000617432 GIPC1O14908 333 aa6.08□□□□□ -1.44
CUL3-216ENST00000617432 C6P13671 934 aa6.08□□□□□ -1.44
CUL3-216ENST00000617432 CANXP27824 592 aaKnown RBP6.08□□□□□ -1.44
CUL3-216ENST00000617432 ARL4AP40617 200 aa6.08□□□□□ -1.44
CUL3-216ENST00000617432 ENOX2Q16206 610 aaKnown RBP6.08□□□□□ -1.44
CUL3-216ENST00000617432 ERICH6Q7L0X2 663 aa6.08□□□□□ -1.44
CUL3-216ENST00000617432 SV2BQ7L1I2 683 aa6.08□□□□□ -1.44
CUL3-216ENST00000617432 ENOX1Q8TC92 643 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms