RNA–Protein interactions for RNA: ENST00000616952.1

AP003900.1-202, humanhuman

TSL 3

Gene AP003900.1, Length 225 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003900.1-202ENST00000616952 E9PSI1 815 aa12.42□□□□□ -0.42
AP003900.1-202ENST00000616952 ATP2A1O14983 1001 aa12.42□□□□□ -0.42
AP003900.1-202ENST00000616952 LGR5O75473 907 aa12.42□□□□□ -0.42
AP003900.1-202ENST00000616952 LINC00271P0C7V0 271 aa12.42□□□□□ -0.42
AP003900.1-202ENST00000616952 BMPR1AP36894 532 aa12.42□□□□□ -0.42
AP003900.1-202ENST00000616952 USP5P45974 858 aa12.42□□□□□ -0.42
AP003900.1-202ENST00000616952 NRIP1P48552 1158 aa12.42□□□□□ -0.42
AP003900.1-202ENST00000616952 PLCD1P51178 756 aa12.42□□□□□ -0.42
AP003900.1-202ENST00000616952 CAMK1Q14012 370 aa12.42□□□□□ -0.42
AP003900.1-202ENST00000616952 MBTPS1Q14703 1052 aa12.42□□□□□ -0.42
AP003900.1-202ENST00000616952 DUSP28Q4G0W2 176 aa12.42□□□□□ -0.42
AP003900.1-202ENST00000616952 EEPD1Q7L9B9 569 aa12.42□□□□□ -0.42
AP003900.1-202ENST00000616952 FIBCD1Q8N539 461 aa12.42□□□□□ -0.42
AP003900.1-202ENST00000616952 FBXO40Q9UH90 709 aa12.42□□□□□ -0.42
AP003900.1-202ENST00000616952 RWDD3Q9Y3V2 267 aa12.42□□□□□ -0.42
AP003900.1-202ENST00000616952 MYH1P12882 1939 aa12.42□□□□□ -0.42
AP003900.1-202ENST00000616952 NBEAQ8NFP9 2946 aa12.41□□□□□ -0.42
AP003900.1-202ENST00000616952 VAMP4O75379 141 aa12.41□□□□□ -0.42
AP003900.1-202ENST00000616952 UPP2O95045 317 aa12.41□□□□□ -0.42
AP003900.1-202ENST00000616952 NPR3P17342 541 aa12.41□□□□□ -0.42
AP003900.1-202ENST00000616952 ARID4AP29374 1257 aaPredicted RBP12.41□□□□□ -0.42
AP003900.1-202ENST00000616952 ZNF200P98182 395 aaPredicted RBP12.41□□□□□ -0.42
AP003900.1-202ENST00000616952 GABPAQ06546 454 aa12.41□□□□□ -0.42
AP003900.1-202ENST00000616952 FAM83BQ5T0W9 1011 aa12.41□□□□□ -0.42
AP003900.1-202ENST00000616952 RIN2Q8WYP3 895 aaPredicted RBP12.41□□□□□ -0.42
AP003900.1-202ENST00000616952 TOP1MTQ969P6 601 aa12.41□□□□□ -0.42
AP003900.1-202ENST00000616952 SLF1Q9BQI6 1058 aa12.41□□□□□ -0.42
AP003900.1-202ENST00000616952 TSHZ2Q9NRE2 1034 aa12.41□□□□□ -0.42
AP003900.1-202ENST00000616952 ZMIZ1Q9ULJ6 1067 aa12.41□□□□□ -0.42
AP003900.1-202ENST00000616952 NR2E1Q9Y466 385 aa12.41□□□□□ -0.42
AP003900.1-202ENST00000616952 USP17L12C9JPN9 530 aa12.4□□□□□ -0.42
AP003900.1-202ENST00000616952 USP17L21D6R901 530 aa12.4□□□□□ -0.42
AP003900.1-202ENST00000616952 SHC2P98077 582 aa12.4□□□□□ -0.42
AP003900.1-202ENST00000616952 GDF6Q6KF10 455 aaPredicted RBP12.4□□□□□ -0.42
AP003900.1-202ENST00000616952 TRAF7Q6Q0C0 670 aa12.4□□□□□ -0.42
AP003900.1-202ENST00000616952 KIAA1211Q6ZU35 1233 aa12.4□□□□□ -0.42
AP003900.1-202ENST00000616952 RBM23Q86U06 439 aaKnown RBP12.4□□□□□ -0.42
AP003900.1-202ENST00000616952 CPXCR1Q8N123 301 aa12.4□□□□□ -0.42
AP003900.1-202ENST00000616952 CHST13Q8NET6 341 aa12.4□□□□□ -0.42
AP003900.1-202ENST00000616952 DBF4BQ8NFT6 615 aa12.4□□□□□ -0.42
AP003900.1-202ENST00000616952 IFIH1Q9BYX4 1025 aaKnown RBP12.4□□□□□ -0.42
AP003900.1-202ENST00000616952 VTA1Q9NP79 307 aa12.4□□□□□ -0.42
AP003900.1-202ENST00000616952 LOC400499M0QZD8 3231 aa12.39□□□□□ -0.43
AP003900.1-202ENST00000616952 PMLP29590 882 aa12.39□□□□□ -0.43
AP003900.1-202ENST00000616952 CHMP4BP1P59074 171 aa12.39□□□□□ -0.43
AP003900.1-202ENST00000616952 BRDTQ58F21 947 aaPredicted RBP12.39□□□□□ -0.43
AP003900.1-202ENST00000616952 LRSAM1Q6UWE0 723 aa12.39□□□□□ -0.43
AP003900.1-202ENST00000616952 OR6J1Q8NGC5 347 aa12.39□□□□□ -0.43
AP003900.1-202ENST00000616952 EMSYQ7Z589 1322 aa12.38□□□□□ -0.43
AP003900.1-202ENST00000616952 RAD50Q92878 1312 aa12.38□□□□□ -0.43
AP003900.1-202ENST00000616952 C2CD4DB7Z1M9 353 aa12.38□□□□□ -0.43
AP003900.1-202ENST00000616952 KPNA6O60684 536 aa12.38□□□□□ -0.43
AP003900.1-202ENST00000616952 KINO60870 393 aaKnown RBP12.38□□□□□ -0.43
AP003900.1-202ENST00000616952 ASGR2P07307 311 aa12.38□□□□□ -0.43
AP003900.1-202ENST00000616952 SP9P0CG40 484 aa12.38□□□□□ -0.43
AP003900.1-202ENST00000616952 DNAJB1P25685 340 aa12.38□□□□□ -0.43
AP003900.1-202ENST00000616952 RBM10P98175 930 aaKnown RBP12.38□□□□□ -0.43
AP003900.1-202ENST00000616952 SESTD1Q86VW0 696 aa12.38□□□□□ -0.43
AP003900.1-202ENST00000616952 CLP1Q92989 425 aaKnown RBP12.38□□□□□ -0.43
AP003900.1-202ENST00000616952 IL17RAQ96F46 866 aa12.38□□□□□ -0.43
AP003900.1-202ENST00000616952 RAVER2Q9HCJ3 691 aaKnown RBP12.38□□□□□ -0.43
AP003900.1-202ENST00000616952 GOPCQ9HD26 462 aa12.38□□□□□ -0.43
AP003900.1-202ENST00000616952 HOMER2Q9NSB8 354 aa12.38□□□□□ -0.43
AP003900.1-202ENST00000616952 PA2G4Q9UQ80 394 aaKnown RBP12.38□□□□□ -0.43
AP003900.1-202ENST00000616952 HELZ2Q9BYK8 2649 aaKnown RBP12.38□□□□□ -0.43
AP003900.1-202ENST00000616952 TRIP12Q14669 1992 aaPredicted RBP12.38□□□□□ -0.43
AP003900.1-202ENST00000616952 ADGRA3Q8IWK6 1321 aa12.37□□□□□ -0.43
AP003900.1-202ENST00000616952 FANCIQ9NVI1 1328 aa12.37□□□□□ -0.43
AP003900.1-202ENST00000616952 WDFY3Q8IZQ1 3526 aa12.37□□□□□ -0.43
AP003900.1-202ENST00000616952 RAD21O60216 631 aa12.37□□□□□ -0.43
AP003900.1-202ENST00000616952 GORABQ5T7V8 394 aa12.37□□□□□ -0.43
AP003900.1-202ENST00000616952 ZNF618Q5T7W0 954 aa12.37□□□□□ -0.43
AP003900.1-202ENST00000616952 CERS3Q8IU89 383 aa12.37□□□□□ -0.43
AP003900.1-202ENST00000616952 MIGA1Q8NAN2 632 aa12.37□□□□□ -0.43
AP003900.1-202ENST00000616952 VN1R2Q8NFZ6 395 aa12.37□□□□□ -0.43
AP003900.1-202ENST00000616952 ATP8B4Q8TF62 1192 aa12.37□□□□□ -0.43
AP003900.1-202ENST00000616952 NEK1Q96PY6 1258 aa12.37□□□□□ -0.43
AP003900.1-202ENST00000616952 PLVAPQ9BX97 442 aa12.37□□□□□ -0.43
AP003900.1-202ENST00000616952 WDR11Q9BZH6 1224 aa12.37□□□□□ -0.43
AP003900.1-202ENST00000616952 USP44Q9H0E7 712 aa12.37□□□□□ -0.43
AP003900.1-202ENST00000616952 A1CFQ9NQ94 594 aaKnown RBP12.37□□□□□ -0.43
AP003900.1-202ENST00000616952 USP18Q9UMW8 372 aa12.37□□□□□ -0.43
AP003900.1-202ENST00000616952 PLAGL2Q9UPG8 496 aa12.37□□□□□ -0.43
AP003900.1-202ENST00000616952 AKAP2Q9Y2D5 859 aa12.37□□□□□ -0.43
AP003900.1-202ENST00000616952 COG6Q9Y2V7 657 aa12.37□□□□□ -0.43
AP003900.1-202ENST00000616952 A6NJR5 290 aa12.36□□□□□ -0.43
AP003900.1-202ENST00000616952 CYSRT1A8MQ03 144 aa12.36□□□□□ -0.43
AP003900.1-202ENST00000616952 POLR3DP05423 398 aaPredicted RBP12.36□□□□□ -0.43
AP003900.1-202ENST00000616952 KCNC4Q03721 635 aa12.36□□□□□ -0.43
AP003900.1-202ENST00000616952 RALBP1Q15311 655 aa12.36□□□□□ -0.43
AP003900.1-202ENST00000616952 PLEKHG4Q58EX7 1191 aa12.36□□□□□ -0.43
AP003900.1-202ENST00000616952 NEUROD6Q96NK8 337 aa12.36□□□□□ -0.43
AP003900.1-202ENST00000616952 NUP88Q99567 741 aaPredicted RBP12.36□□□□□ -0.43
AP003900.1-202ENST00000616952 S1PR5Q9H228 398 aa12.36□□□□□ -0.43
AP003900.1-202ENST00000616952 ERVK-5Q9HDB9 667 aa12.36□□□□□ -0.43
AP003900.1-202ENST00000616952 CTDP1Q9Y5B0 961 aaPredicted RBP12.36□□□□□ -0.43
AP003900.1-202ENST00000616952 ITPR1Q14643 2758 aa12.36□□□□□ -0.43
AP003900.1-202ENST00000616952 IGF2RP11717 2491 aa12.35□□□□□ -0.43
AP003900.1-202ENST00000616952 SLC30A4O14863 429 aa12.35□□□□□ -0.43
AP003900.1-202ENST00000616952 ZBED4O75132 1171 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms