RNA–Protein interactions for RNA: ENST00000616377.4

GTF2IP1-204, Transcript of general transcription factor IIi pseudogene 1, humanhuman

TSL 2 BASIC

Gene GTF2IP1, Length 2,632 nt, Biotype processed transcript, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IP1-204ENST00000616377 LSP1P33241 339 aa26.54■■□□□ 1.84
GTF2IP1-204ENST00000616377 RNASE9P60153 205 aaKnown RBP26.54■■□□□ 1.84
GTF2IP1-204ENST00000616377 IRX3P78415 501 aaPredicted RBP26.54■■□□□ 1.84
GTF2IP1-204ENST00000616377 MTMR9Q96QG7 549 aa26.54■■□□□ 1.84
GTF2IP1-204ENST00000616377 EDEM3Q9BZQ6 932 aa26.54■■□□□ 1.84
GTF2IP1-204ENST00000616377 STK17AQ9UEE5 414 aa26.54■■□□□ 1.84
GTF2IP1-204ENST00000616377 SLC9C1Q4G0N8 1177 aa26.53■■□□□ 1.84
GTF2IP1-204ENST00000616377 MCTP2Q6DN12 878 aa26.53■■□□□ 1.84
GTF2IP1-204ENST00000616377 USP17L2Q6R6M4 530 aa26.53■■□□□ 1.84
GTF2IP1-204ENST00000616377 B4GALNT4Q76KP1 1039 aa26.53■■□□□ 1.84
GTF2IP1-204ENST00000616377 NUDT12Q9BQG2 462 aa26.53■■□□□ 1.84
GTF2IP1-204ENST00000616377 KLRC1P26715 233 aa26.53■■□□□ 1.84
GTF2IP1-204ENST00000616377 RPS8P62241 208 aaKnown RBP26.53■■□□□ 1.84
GTF2IP1-204ENST00000616377 CDK5RAP3Q96JB5 506 aa26.53■■□□□ 1.84
GTF2IP1-204ENST00000616377 ROBO3Q96MS0 1386 aa26.53■■□□□ 1.84
GTF2IP1-204ENST00000616377 POTEMA6NI47 508 aa26.52■■□□□ 1.84
GTF2IP1-204ENST00000616377 RASA1P20936 1047 aa26.52■■□□□ 1.84
GTF2IP1-204ENST00000616377 CALCRLQ16602 461 aa26.52■■□□□ 1.84
GTF2IP1-204ENST00000616377 FAM83BQ5T0W9 1011 aa26.52■■□□□ 1.84
GTF2IP1-204ENST00000616377 KCNK18Q7Z418 384 aa26.52■■□□□ 1.84
GTF2IP1-204ENST00000616377 DDX12PQ92771 950 aa26.52■■□□□ 1.84
GTF2IP1-204ENST00000616377 NAB2Q15742 525 aa26.52■■□□□ 1.84
GTF2IP1-204ENST00000616377 SOGA3Q5TF21 947 aa26.52■■□□□ 1.84
GTF2IP1-204ENST00000616377 SFMBT2Q5VUG0 894 aa26.52■■□□□ 1.84
GTF2IP1-204ENST00000616377 MREGQ8N565 214 aa26.52■■□□□ 1.84
GTF2IP1-204ENST00000616377 SLC37A4O43826 429 aa26.52■■□□□ 1.84
GTF2IP1-204ENST00000616377 SERPING1P05155 500 aa26.52■■□□□ 1.84
GTF2IP1-204ENST00000616377 TGFBRAP1Q8WUH2 860 aa26.52■■□□□ 1.84
GTF2IP1-204ENST00000616377 RAD54LQ92698 747 aa26.52■■□□□ 1.84
GTF2IP1-204ENST00000616377 PIGSQ96S52 555 aa26.52■■□□□ 1.84
GTF2IP1-204ENST00000616377 CEP72Q9P209 647 aa26.52■■□□□ 1.84
GTF2IP1-204ENST00000616377 SAP30BPQ9UHR5 308 aaKnown RBP26.52■■□□□ 1.84
GTF2IP1-204ENST00000616377 CAPN7Q9Y6W3 813 aa26.52■■□□□ 1.84
GTF2IP1-204ENST00000616377 NR1D1P20393 614 aa26.51■■□□□ 1.83
GTF2IP1-204ENST00000616377 EHHADHQ08426 723 aa26.51■■□□□ 1.83
GTF2IP1-204ENST00000616377 REXO1Q8N1G1 1221 aaKnown RBP26.51■■□□□ 1.83
GTF2IP1-204ENST00000616377 EPN3Q9H201 632 aa26.51■■□□□ 1.83
GTF2IP1-204ENST00000616377 CCDC88AQ3V6T2 1871 aa26.51■■□□□ 1.83
GTF2IP1-204ENST00000616377 MEI1Q5TIA1 1274 aa26.51■■□□□ 1.83
GTF2IP1-204ENST00000616377 NAA35Q5VZE5 725 aa26.51■■□□□ 1.83
GTF2IP1-204ENST00000616377 CD302Q8IX05 232 aa26.51■■□□□ 1.83
GTF2IP1-204ENST00000616377 TBC1D5Q92609 795 aa26.51■■□□□ 1.83
GTF2IP1-204ENST00000616377 INPP4AQ96PE3 977 aaPredicted RBP26.51■■□□□ 1.83
GTF2IP1-204ENST00000616377 TSG101Q99816 390 aa26.51■■□□□ 1.83
GTF2IP1-204ENST00000616377 POLR2FP61218 127 aaKnown RBP26.5■■□□□ 1.83
GTF2IP1-204ENST00000616377 DIXDC1Q155Q3 683 aa26.5■■□□□ 1.83
GTF2IP1-204ENST00000616377 CLEC4GQ6UXB4 293 aa26.5■■□□□ 1.83
GTF2IP1-204ENST00000616377 LSM14BQ9BX40 385 aaKnown RBP26.5■■□□□ 1.83
GTF2IP1-204ENST00000616377 COL4A3BPQ9Y5P4 624 aa26.5■■□□□ 1.83
GTF2IP1-204ENST00000616377 MAST2Q6P0Q8 1798 aa26.5■■□□□ 1.83
GTF2IP1-204ENST00000616377 ATXN2Q99700 1313 aaKnown RBP26.5■■□□□ 1.83
GTF2IP1-204ENST00000616377 TDP2O95551 362 aa26.5■■□□□ 1.83
GTF2IP1-204ENST00000616377 NT5C2P49902 561 aa26.5■■□□□ 1.83
GTF2IP1-204ENST00000616377 FXR2P51116 673 aaKnown RBP eCLIP26.5■■□□□ 1.83
GTF2IP1-204ENST00000616377 CNPY4Q8N129 248 aa26.5■■□□□ 1.83
GTF2IP1-204ENST00000616377 PACSIN1Q9BY11 444 aa26.5■■□□□ 1.83
GTF2IP1-204ENST00000616377 RIC8AQ9NPQ8 531 aa26.5■■□□□ 1.83
GTF2IP1-204ENST00000616377 GRID2IPA4D2P6 1211 aa26.49■■□□□ 1.83
GTF2IP1-204ENST00000616377 MEFVO15553 781 aaPredicted RBP26.49■■□□□ 1.83
GTF2IP1-204ENST00000616377 EDIL3O43854 480 aa26.49■■□□□ 1.83
GTF2IP1-204ENST00000616377 FNTAP49354 379 aa26.49■■□□□ 1.83
GTF2IP1-204ENST00000616377 CDC37Q16543 378 aaPredicted RBP26.49■■□□□ 1.83
GTF2IP1-204ENST00000616377 SWT1Q5T5J6 900 aaKnown RBP26.49■■□□□ 1.83
GTF2IP1-204ENST00000616377 EMC10Q5UCC4 262 aa26.49■■□□□ 1.83
GTF2IP1-204ENST00000616377 OTUD6BQ8N6M0 293 aa26.49■■□□□ 1.83
GTF2IP1-204ENST00000616377 CEP89Q96ST8 783 aa26.49■■□□□ 1.83
GTF2IP1-204ENST00000616377 KANSL2Q9H9L4 492 aa26.49■■□□□ 1.83
GTF2IP1-204ENST00000616377 SEC63Q9UGP8 760 aaKnown RBP26.49■■□□□ 1.83
GTF2IP1-204ENST00000616377 ATP6V0A2Q9Y487 856 aa26.49■■□□□ 1.83
GTF2IP1-204ENST00000616377 PCDHGC5Q9Y5F6 944 aa26.49■■□□□ 1.83
GTF2IP1-204ENST00000616377 RAD51CO43502 376 aa26.49■■□□□ 1.83
GTF2IP1-204ENST00000616377 ARID5AQ03989 594 aa26.49■■□□□ 1.83
GTF2IP1-204ENST00000616377 CCDC40Q4G0X9 1142 aa26.49■■□□□ 1.83
GTF2IP1-204ENST00000616377 PRPF38AQ8NAV1 312 aaKnown RBP26.49■■□□□ 1.83
GTF2IP1-204ENST00000616377 SNX29Q8TEQ0 813 aa26.49■■□□□ 1.83
GTF2IP1-204ENST00000616377 SYN2Q92777 582 aaPredicted RBP26.49■■□□□ 1.83
GTF2IP1-204ENST00000616377 A0A087X0T9 212 aa26.48■■□□□ 1.83
GTF2IP1-204ENST00000616377 TRAF5O00463 557 aa26.48■■□□□ 1.83
GTF2IP1-204ENST00000616377 PPP1R37O75864 691 aa26.48■■□□□ 1.83
GTF2IP1-204ENST00000616377 KIAA0754O94854 1291 aa26.48■■□□□ 1.83
GTF2IP1-204ENST00000616377 FAM228BP0C875 321 aa26.48■■□□□ 1.83
GTF2IP1-204ENST00000616377 SEC24CP53992 1094 aa26.48■■□□□ 1.83
GTF2IP1-204ENST00000616377 GRIK5Q16478 980 aa26.48■■□□□ 1.83
GTF2IP1-204ENST00000616377 PTGISQ16647 500 aa26.48■■□□□ 1.83
GTF2IP1-204ENST00000616377 ZCWPW2Q504Y3 356 aa26.48■■□□□ 1.83
GTF2IP1-204ENST00000616377 SPTY2D1Q68D10 685 aaPredicted RBP26.48■■□□□ 1.83
GTF2IP1-204ENST00000616377 MAPKAPK5Q8IW41 473 aa26.48■■□□□ 1.83
GTF2IP1-204ENST00000616377 ATP6V1G3Q96LB4 118 aa26.48■■□□□ 1.83
GTF2IP1-204ENST00000616377 UBA5Q9GZZ9 404 aa26.48■■□□□ 1.83
GTF2IP1-204ENST00000616377 MYO1FO00160 1098 aa26.48■■□□□ 1.83
GTF2IP1-204ENST00000616377 ENOX2Q16206 610 aaKnown RBP26.48■■□□□ 1.83
GTF2IP1-204ENST00000616377 SLC18A3Q16572 532 aa26.48■■□□□ 1.83
GTF2IP1-204ENST00000616377 MYOCDQ8IZQ8 938 aa26.48■■□□□ 1.83
GTF2IP1-204ENST00000616377 ZNF473Q8WTR7 871 aaKnown RBP26.48■■□□□ 1.83
GTF2IP1-204ENST00000616377 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.48■■□□□ 1.83
GTF2IP1-204ENST00000616377 FKBP3Q00688 224 aaKnown RBP26.47■■□□□ 1.83
GTF2IP1-204ENST00000616377 ORC2Q13416 577 aaPredicted RBP26.47■■□□□ 1.83
GTF2IP1-204ENST00000616377 ECM1Q16610 540 aa26.47■■□□□ 1.83
GTF2IP1-204ENST00000616377 TMEM266Q2M3C6 531 aa26.47■■□□□ 1.83
GTF2IP1-204ENST00000616377 KLHL7Q8IXQ5 586 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms