RNA–Protein interactions for RNA: ENST00000615940.4

LRTOMT-222, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, human

TSL 5 BASIC

Gene LRTOMT, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRTOMT-222	ENST00000615940	SH3TC1	Q8TE82	1336 aa		10.65	□□□□□ -0.7
LRTOMT-222	ENST00000615940		A0A0G2JLW4	131 aa		10.65	□□□□□ -0.7
LRTOMT-222	ENST00000615940	SPDYE2B	A6NHP3	402 aa		10.65	□□□□□ -0.7
LRTOMT-222	ENST00000615940	SPDYE5	A6NIY4	337 aa		10.65	□□□□□ -0.7
LRTOMT-222	ENST00000615940	TTC34	A8MYJ7	566 aa		10.65	□□□□□ -0.7
LRTOMT-222	ENST00000615940	TMEM232	C9JQI7	657 aa		10.65	□□□□□ -0.7
LRTOMT-222	ENST00000615940	IRS4	O14654	1257 aa	Predicted RBP	10.65	□□□□□ -0.7
LRTOMT-222	ENST00000615940	TSPAN1	O60635	241 aa		10.65	□□□□□ -0.7
LRTOMT-222	ENST00000615940	ALDH1L1	O75891	902 aa		10.65	□□□□□ -0.7
LRTOMT-222	ENST00000615940	CSPG5	O95196	566 aa		10.65	□□□□□ -0.7
LRTOMT-222	ENST00000615940	PCCA	P05165	728 aa	Predicted RBP	10.65	□□□□□ -0.7
LRTOMT-222	ENST00000615940	SPDYE6	P0CI01	402 aa		10.65	□□□□□ -0.7
LRTOMT-222	ENST00000615940	TMOD1	P28289	359 aa		10.65	□□□□□ -0.7
LRTOMT-222	ENST00000615940	CASP7	P55210	303 aa		10.65	□□□□□ -0.7
LRTOMT-222	ENST00000615940	RRP1	P56182	461 aa	Known RBP	10.65	□□□□□ -0.7
LRTOMT-222	ENST00000615940	GUCY1B3	Q02153	619 aa		10.65	□□□□□ -0.7
LRTOMT-222	ENST00000615940	KIF22	Q14807	665 aa		10.65	□□□□□ -0.7
LRTOMT-222	ENST00000615940	SPDYE2	Q495Y8	402 aa		10.65	□□□□□ -0.7
LRTOMT-222	ENST00000615940	HIBCH	Q6NVY1	386 aa	Predicted RBP	10.65	□□□□□ -0.7
LRTOMT-222	ENST00000615940	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	10.65	□□□□□ -0.7
LRTOMT-222	ENST00000615940	FBXO18	Q8NFZ0	1043 aa		10.65	□□□□□ -0.7
LRTOMT-222	ENST00000615940	OR8H1	Q8NGG4	311 aa		10.65	□□□□□ -0.7
LRTOMT-222	ENST00000615940	AFAP1L1	Q8TED9	768 aa		10.65	□□□□□ -0.7
LRTOMT-222	ENST00000615940	RBM18	Q96H35	190 aa	Known RBP	10.65	□□□□□ -0.7
LRTOMT-222	ENST00000615940	USP44	Q9H0E7	712 aa		10.65	□□□□□ -0.7
LRTOMT-222	ENST00000615940	NSRP1	Q9H0G5	558 aa	Known RBP	10.65	□□□□□ -0.7
LRTOMT-222	ENST00000615940	OSBPL3	Q9H4L5	887 aa		10.65	□□□□□ -0.7
LRTOMT-222	ENST00000615940	GPR108	Q9NPR9	543 aa		10.65	□□□□□ -0.7
LRTOMT-222	ENST00000615940	C9orf78	Q9NZ63	289 aa	Predicted RBP	10.65	□□□□□ -0.7
LRTOMT-222	ENST00000615940	ARFGEF1	Q9Y6D6	1849 aa		10.65	□□□□□ -0.71
LRTOMT-222	ENST00000615940	GRM8	O00222	908 aa		10.64	□□□□□ -0.71
LRTOMT-222	ENST00000615940	TSPAN6	O43657	245 aa		10.64	□□□□□ -0.71
LRTOMT-222	ENST00000615940	IDO1	P14902	403 aa		10.64	□□□□□ -0.71
LRTOMT-222	ENST00000615940	DNAJA1	P31689	397 aa	Known RBP	10.64	□□□□□ -0.71
LRTOMT-222	ENST00000615940	CCT4	P50991	539 aa	Known RBP	10.64	□□□□□ -0.71
LRTOMT-222	ENST00000615940	SKOR1	P84550	965 aa		10.64	□□□□□ -0.71
LRTOMT-222	ENST00000615940	INTS3	Q68E01	1043 aa	Known RBP	10.64	□□□□□ -0.71
LRTOMT-222	ENST00000615940	SWSAP1	Q6NVH7	229 aa		10.64	□□□□□ -0.71
LRTOMT-222	ENST00000615940	TMC6	Q7Z403	805 aa		10.64	□□□□□ -0.71
LRTOMT-222	ENST00000615940	RAB11FIP4	Q86YS3	637 aa		10.64	□□□□□ -0.71
LRTOMT-222	ENST00000615940	CARNMT1	Q8N4J0	409 aa		10.64	□□□□□ -0.71
LRTOMT-222	ENST00000615940	MEIS3	Q99687	375 aa		10.64	□□□□□ -0.71
LRTOMT-222	ENST00000615940	SYT17	Q9BSW7	474 aa		10.64	□□□□□ -0.71
LRTOMT-222	ENST00000615940	TUBGCP4	Q9UGJ1	667 aa		10.64	□□□□□ -0.71
LRTOMT-222	ENST00000615940	LCMT1	Q9UIC8	334 aa		10.64	□□□□□ -0.71
LRTOMT-222	ENST00000615940	NDUFAB1	O14561	156 aa		10.64	□□□□□ -0.71
LRTOMT-222	ENST00000615940	COBL	O75128	1261 aa		10.64	□□□□□ -0.71
LRTOMT-222	ENST00000615940	IVL	P07476	585 aa		10.64	□□□□□ -0.71
LRTOMT-222	ENST00000615940	ALOX15	P16050	662 aa	Predicted RBP	10.64	□□□□□ -0.71
LRTOMT-222	ENST00000615940	DPEP1	P16444	411 aa		10.64	□□□□□ -0.71
LRTOMT-222	ENST00000615940	MCM3	P25205	808 aa		10.64	□□□□□ -0.71
LRTOMT-222	ENST00000615940	ZNF76	P36508	570 aa		10.64	□□□□□ -0.71
LRTOMT-222	ENST00000615940	PUM3	Q15397	648 aa	Known RBP	10.64	□□□□□ -0.71
LRTOMT-222	ENST00000615940	RILPL1	Q5EBL4	403 aa		10.64	□□□□□ -0.71
LRTOMT-222	ENST00000615940	ITPRIP	Q8IWB1	547 aa		10.64	□□□□□ -0.71
LRTOMT-222	ENST00000615940	ATP6V1E2	Q96A05	226 aa		10.64	□□□□□ -0.71
LRTOMT-222	ENST00000615940	TSGA13	Q96PP4	275 aa		10.64	□□□□□ -0.71
LRTOMT-222	ENST00000615940	TTPAL	Q9BTX7	342 aa		10.64	□□□□□ -0.71
LRTOMT-222	ENST00000615940	SLK	Q9H2G2	1235 aa	Predicted RBP	10.64	□□□□□ -0.71
LRTOMT-222	ENST00000615940	KIF9	Q9HAQ2	790 aa		10.64	□□□□□ -0.71
LRTOMT-222	ENST00000615940	RYDEN	Q9NUL5	291 aa	Known RBP	10.64	□□□□□ -0.71
LRTOMT-222	ENST00000615940	ZC3H7B	Q9UGR2	993 aa	Known RBP	10.64	□□□□□ -0.71
LRTOMT-222	ENST00000615940	HERC5	Q9UII4	1024 aa	Known RBP	10.64	□□□□□ -0.71
LRTOMT-222	ENST00000615940	PCDHGC5	Q9Y5F6	944 aa		10.64	□□□□□ -0.71
LRTOMT-222	ENST00000615940	AHCYL1	O43865	530 aa		10.63	□□□□□ -0.71
LRTOMT-222	ENST00000615940	RHOBTB3	O94955	611 aa		10.63	□□□□□ -0.71
LRTOMT-222	ENST00000615940	MBD4	O95243	580 aa		10.63	□□□□□ -0.71
LRTOMT-222	ENST00000615940	VIM	P08670	466 aa	Known RBP	10.63	□□□□□ -0.71
LRTOMT-222	ENST00000615940	XRCC5	P13010	732 aa	Known RBP	10.63	□□□□□ -0.71
LRTOMT-222	ENST00000615940	PPM1F	P49593	454 aa	Predicted RBP	10.63	□□□□□ -0.71
LRTOMT-222	ENST00000615940	RAC1	P63000	192 aa		10.63	□□□□□ -0.71
LRTOMT-222	ENST00000615940	PDE1C	Q14123	709 aa	Predicted RBP	10.63	□□□□□ -0.71
LRTOMT-222	ENST00000615940	EPHA10	Q5JZY3	1008 aa		10.63	□□□□□ -0.71
LRTOMT-222	ENST00000615940	FAM83B	Q5T0W9	1011 aa		10.63	□□□□□ -0.71
LRTOMT-222	ENST00000615940	CREB3L3	Q68CJ9	461 aa		10.63	□□□□□ -0.71
LRTOMT-222	ENST00000615940	INTS8	Q75QN2	995 aa	Known RBP	10.63	□□□□□ -0.71
LRTOMT-222	ENST00000615940	SLC51A	Q86UW1	340 aa		10.63	□□□□□ -0.71
LRTOMT-222	ENST00000615940	TMCO5A	Q8N6Q1	288 aa		10.63	□□□□□ -0.71
LRTOMT-222	ENST00000615940	PDLIM2	Q96JY6	352 aa		10.63	□□□□□ -0.71
LRTOMT-222	ENST00000615940	BRIP1	Q9BX63	1249 aa		10.63	□□□□□ -0.71
LRTOMT-222	ENST00000615940	IL1RAPL1	Q9NZN1	696 aa		10.63	□□□□□ -0.71
LRTOMT-222	ENST00000615940	PARP2	Q9UGN5	583 aa		10.63	□□□□□ -0.71
LRTOMT-222	ENST00000615940	RIMKLB	Q9ULI2	386 aa		10.63	□□□□□ -0.71
LRTOMT-222	ENST00000615940	MYO6	Q9UM54	1294 aa		10.63	□□□□□ -0.71
LRTOMT-222	ENST00000615940	DAAM1	Q9Y4D1	1078 aa		10.63	□□□□□ -0.71
LRTOMT-222	ENST00000615940	CD2AP	Q9Y5K6	639 aa		10.63	□□□□□ -0.71
LRTOMT-222	ENST00000615940	EVI5	O60447	810 aa		10.62	□□□□□ -0.71
LRTOMT-222	ENST00000615940	KCNJ13	O60928	360 aa		10.62	□□□□□ -0.71
LRTOMT-222	ENST00000615940	TADA3	O75528	432 aa		10.62	□□□□□ -0.71
LRTOMT-222	ENST00000615940	PRLR	P16471	622 aa		10.62	□□□□□ -0.71
LRTOMT-222	ENST00000615940	KCNA3	P22001	575 aa		10.62	□□□□□ -0.71
LRTOMT-222	ENST00000615940	MTHFR	P42898	656 aa		10.62	□□□□□ -0.71
LRTOMT-222	ENST00000615940	STT3A	P46977	705 aa		10.62	□□□□□ -0.71
LRTOMT-222	ENST00000615940	SMTN	P53814	917 aa		10.62	□□□□□ -0.71
LRTOMT-222	ENST00000615940	DPYS	Q14117	519 aa		10.62	□□□□□ -0.71
LRTOMT-222	ENST00000615940	NFE2	Q16621	373 aa	Predicted RBP	10.62	□□□□□ -0.71
LRTOMT-222	ENST00000615940	LRRFIP1	Q32MZ4	808 aa	Known RBP	10.62	□□□□□ -0.71
LRTOMT-222	ENST00000615940	VPS53	Q5VIR6	699 aa		10.62	□□□□□ -0.71
LRTOMT-222	ENST00000615940	LRRC31	Q6UY01	552 aa		10.62	□□□□□ -0.71
LRTOMT-222	ENST00000615940	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	10.62	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms