RNA–Protein interactions for RNA: ENST00000615136.4

MMP28-204, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MMP28, Length 2,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-204ENST00000615136 FECHP22830 423 aa21.34■■□□□ 1.01
MMP28-204ENST00000615136 RBL2Q08999 1139 aa21.34■■□□□ 1.01
MMP28-204ENST00000615136 HYIQ5T013 277 aa21.34■■□□□ 1.01
MMP28-204ENST00000615136 PPFIBP1Q86W92 1011 aa21.34■■□□□ 1.01
MMP28-204ENST00000615136 LDHDQ86WU2 507 aa21.34■■□□□ 1.01
MMP28-204ENST00000615136 DDX12PQ92771 950 aa21.34■■□□□ 1.01
MMP28-204ENST00000615136 AGBL1Q96MI9 1066 aa21.34■■□□□ 1.01
MMP28-204ENST00000615136 SRRTQ9BXP5 876 aaKnown RBP21.34■■□□□ 1.01
MMP28-204ENST00000615136 FEM1BQ9UK73 627 aa21.34■■□□□ 1.01
MMP28-204ENST00000615136 KIAA1024Q9UPX6 916 aa21.34■■□□□ 1.01
MMP28-204ENST00000615136 ZNF536O15090 1300 aa21.34■■□□□ 1.01
MMP28-204ENST00000615136 CIITAP33076 1130 aa21.34■■□□□ 1.01
MMP28-204ENST00000615136 FAM160B2Q86V87 743 aa21.34■■□□□ 1.01
MMP28-204ENST00000615136 GLIS3Q8NEA6 775 aa21.34■■□□□ 1.01
MMP28-204ENST00000615136 IGLV3-22A0A075B6J6 115 aa21.33■■□□□ 1.01
MMP28-204ENST00000615136 PSMA7O14818 248 aa21.33■■□□□ 1.01
MMP28-204ENST00000615136 COPB1P53618 953 aaKnown RBP21.33■■□□□ 1.01
MMP28-204ENST00000615136 ANKRD40Q6AI12 368 aa21.33■■□□□ 1.01
MMP28-204ENST00000615136 MCTP2Q6DN12 878 aa21.33■■□□□ 1.01
MMP28-204ENST00000615136 UNC13DQ70J99 1090 aa21.33■■□□□ 1.01
MMP28-204ENST00000615136 TRPM4Q8TD43 1214 aa21.33■■□□□ 1.01
MMP28-204ENST00000615136 CCDC51Q96ER9 411 aa21.33■■□□□ 1.01
MMP28-204ENST00000615136 H7C1D1 291 aa21.33■■□□□ 1
MMP28-204ENST00000615136 GYPCP04921 128 aa21.33■■□□□ 1
MMP28-204ENST00000615136 CNGA4Q8IV77 575 aa21.33■■□□□ 1
MMP28-204ENST00000615136 SLFN12Q8IYM2 578 aa21.33■■□□□ 1
MMP28-204ENST00000615136 LRRN4CLQ8ND94 238 aa21.33■■□□□ 1
MMP28-204ENST00000615136 DNAJC19Q96DA6 116 aa21.33■■□□□ 1
MMP28-204ENST00000615136 TRIM47Q96LD4 638 aa21.33■■□□□ 1
MMP28-204ENST00000615136 WDR18Q9BV38 432 aa21.33■■□□□ 1
MMP28-204ENST00000615136 POTEFA5A3E0 1075 aa21.32■■□□□ 1
MMP28-204ENST00000615136 NKRFO15226 690 aaKnown RBP eCLIP21.32■■□□□ 1
MMP28-204ENST00000615136 CYP3A4P08684 503 aa21.32■■□□□ 1
MMP28-204ENST00000615136 POTEIP0CG38 1075 aa21.32■■□□□ 1
MMP28-204ENST00000615136 IDEP14735 1019 aa21.32■■□□□ 1
MMP28-204ENST00000615136 STIM1Q13586 685 aa21.32■■□□□ 1
MMP28-204ENST00000615136 ANGEL2Q5VTE6 544 aaKnown RBP21.32■■□□□ 1
MMP28-204ENST00000615136 NCAPH2Q6IBW4 605 aa21.32■■□□□ 1
MMP28-204ENST00000615136 POTEGQ6S5H5 508 aa21.32■■□□□ 1
MMP28-204ENST00000615136 POTEEQ6S8J3 1075 aa21.32■■□□□ 1
MMP28-204ENST00000615136 P2RX5Q93086 422 aa21.32■■□□□ 1
MMP28-204ENST00000615136 DHTKD1Q96HY7 919 aaPredicted RBP21.32■■□□□ 1
MMP28-204ENST00000615136 GCOM1H8Y6P7 765 aaPredicted RBP21.31■■□□□ 1
MMP28-204ENST00000615136 N4BP3O15049 544 aa21.31■■□□□ 1
MMP28-204ENST00000615136 CTNND1O60716 968 aaKnown RBP21.31■■□□□ 1
MMP28-204ENST00000615136 POLR2MP0CAP2 368 aa21.31■■□□□ 1
MMP28-204ENST00000615136 CCNE1P24864 410 aa21.31■■□□□ 1
MMP28-204ENST00000615136 EHHADHQ08426 723 aa21.31■■□□□ 1
MMP28-204ENST00000615136 FBXO38Q6PIJ6 1188 aa21.31■■□□□ 1
MMP28-204ENST00000615136 CATSPER3Q86XQ3 398 aa21.31■■□□□ 1
MMP28-204ENST00000615136 SMAP1Q8IYB5 467 aaPredicted RBP21.31■■□□□ 1
MMP28-204ENST00000615136 ANKRD20A12PQ8NF67 263 aa21.31■■□□□ 1
MMP28-204ENST00000615136 CPLX3Q8WVH0 158 aa21.31■■□□□ 1
MMP28-204ENST00000615136 SEMA6BQ9H3T3 888 aa21.31■■□□□ 1
MMP28-204ENST00000615136 VAV3Q9UKW4 847 aa21.31■■□□□ 1
MMP28-204ENST00000615136 NPHP3-ACAD11A0A0J9YXS1 232 aa21.31■■□□□ 1
MMP28-204ENST00000615136 PVALEFA0A1B0GWK0 134 aa21.31■■□□□ 1
MMP28-204ENST00000615136 SOWAHDA6NJG2 315 aa21.31■■□□□ 1
MMP28-204ENST00000615136 TBX3O15119 743 aa21.31■■□□□ 1
MMP28-204ENST00000615136 SSBP05455 408 aaKnown RBP eCLIP21.31■■□□□ 1
MMP28-204ENST00000615136 CCDC175P0C221 793 aa21.31■■□□□ 1
MMP28-204ENST00000615136 PSMC6P62333 389 aa21.31■■□□□ 1
MMP28-204ENST00000615136 CACNB1Q02641 598 aaPredicted RBP21.31■■□□□ 1
MMP28-204ENST00000615136 MTMR2Q13614 643 aa21.31■■□□□ 1
MMP28-204ENST00000615136 CNNM4Q6P4Q7 775 aa21.31■■□□□ 1
MMP28-204ENST00000615136 ZKSCAN4Q969J2 545 aaPredicted RBP21.31■■□□□ 1
MMP28-204ENST00000615136 CCDC47Q96A33 483 aaKnown RBP21.31■■□□□ 1
MMP28-204ENST00000615136 DESI2Q9BSY9 194 aa21.31■■□□□ 1
MMP28-204ENST00000615136 KIAA1683Q9H0B3 1180 aa21.31■■□□□ 1
MMP28-204ENST00000615136 MEIS1O00470 390 aa21.3■■□□□ 1
MMP28-204ENST00000615136 SPATA31C1P0DKV0 1188 aa21.3■■□□□ 1
MMP28-204ENST00000615136 CASP14P31944 242 aa21.3■■□□□ 1
MMP28-204ENST00000615136 ZNF76P36508 570 aa21.3■■□□□ 1
MMP28-204ENST00000615136 TRIM14Q14142 442 aa21.3■■□□□ 1
MMP28-204ENST00000615136 MTF1Q14872 753 aa21.3■■□□□ 1
MMP28-204ENST00000615136 LRRC41Q15345 812 aa21.3■■□□□ 1
MMP28-204ENST00000615136 RAD9BQ6WBX8 426 aa21.3■■□□□ 1
MMP28-204ENST00000615136 FGFBP2Q9BYJ0 223 aa21.3■■□□□ 1
MMP28-204ENST00000615136 DDX41Q9UJV9 622 aaKnown RBP21.3■■□□□ 1
MMP28-204ENST00000615136 MRPL11Q9Y3B7 192 aaKnown RBP21.3■■□□□ 1
MMP28-204ENST00000615136 KDM3AQ9Y4C1 1321 aa21.3■■□□□ 1
MMP28-204ENST00000615136 EML1O00423 815 aa21.29■■□□□ 1
MMP28-204ENST00000615136 URI1O94763 535 aaPredicted RBP21.29■■□□□ 1
MMP28-204ENST00000615136 PLA2G4BP0C869 781 aa21.29■■□□□ 1
MMP28-204ENST00000615136 FXR1P51114 621 aaKnown RBP eCLIP21.29■■□□□ 1
MMP28-204ENST00000615136 CBX1P83916 185 aa21.29■■□□□ 1
MMP28-204ENST00000615136 ERCC6LQ2NKX8 1250 aa21.29■■□□□ 1
MMP28-204ENST00000615136 CSGALNACT2Q8N6G5 542 aa21.29■■□□□ 1
MMP28-204ENST00000615136 WDR24Q96S15 920 aa21.29■■□□□ 1
MMP28-204ENST00000615136 NT5C3AQ9H0P0 336 aa21.29■■□□□ 1
MMP28-204ENST00000615136 MRPL44Q9H9J2 332 aaKnown RBP21.29■■□□□ 1
MMP28-204ENST00000615136 EMILIN3Q9NT22 766 aa21.29■■□□□ 1
MMP28-204ENST00000615136 OGFRQ9NZT2 677 aa21.29■■□□□ 1
MMP28-204ENST00000615136 ADGRG1Q9Y653 693 aa21.29■■□□□ 1
MMP28-204ENST00000615136 RNF225M0QZC1 329 aaPredicted RBP21.29■■□□□ 1
MMP28-204ENST00000615136 NFIBO00712 420 aa21.29■■□□□ 1
MMP28-204ENST00000615136 WDR46O15213 610 aaKnown RBP21.29■■□□□ 1
MMP28-204ENST00000615136 TPM1P09493 284 aa21.29■■□□□ 1
MMP28-204ENST00000615136 H2AFXP16104 143 aaPredicted RBP21.29■■□□□ 1
MMP28-204ENST00000615136 GNG11P61952 73 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms