RNA–Protein interactions for RNA: ENST00000614944.4

VPS11-206, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS11, Length 3,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-206ENST00000614944 EPHX2P34913 555 aa9.78□□□□□ -0.84
VPS11-206ENST00000614944 DNM1Q05193 864 aaKnown RBP9.78□□□□□ -0.84
VPS11-206ENST00000614944 SLC4A8Q2Y0W8 1093 aa9.78□□□□□ -0.84
VPS11-206ENST00000614944 DIS3L2Q8IYB7 885 aaKnown RBP9.78□□□□□ -0.84
VPS11-206ENST00000614944 FAM81AQ8TBF8 368 aa9.78□□□□□ -0.84
VPS11-206ENST00000614944 ZKSCAN4Q969J2 545 aaPredicted RBP9.78□□□□□ -0.84
VPS11-206ENST00000614944 DCPSQ96C86 337 aaKnown RBP9.78□□□□□ -0.84
VPS11-206ENST00000614944 RMDN2Q96LZ7 410 aa9.78□□□□□ -0.84
VPS11-206ENST00000614944 POLR3CQ9BUI4 534 aaPredicted RBP9.78□□□□□ -0.84
VPS11-206ENST00000614944 JMJD4Q9H9V9 463 aa9.78□□□□□ -0.84
VPS11-206ENST00000614944 CEP131Q9UPN4 1083 aa9.78□□□□□ -0.84
VPS11-206ENST00000614944 KIF28PB7ZC32 967 aa9.78□□□□□ -0.84
VPS11-206ENST00000614944 NAT2P11245 290 aa9.78□□□□□ -0.84
VPS11-206ENST00000614944 LIG3P49916 1009 aa9.78□□□□□ -0.84
VPS11-206ENST00000614944 GPR162Q16538 588 aa9.78□□□□□ -0.84
VPS11-206ENST00000614944 LONRF3Q496Y0 759 aa9.78□□□□□ -0.84
VPS11-206ENST00000614944 USP17L2Q6R6M4 530 aa9.78□□□□□ -0.84
VPS11-206ENST00000614944 ZNF579Q8NAF0 562 aaKnown RBP9.78□□□□□ -0.84
VPS11-206ENST00000614944 CHURC1Q8WUH1 139 aa9.78□□□□□ -0.84
VPS11-206ENST00000614944 NAP1L4Q99733 375 aaKnown RBP9.78□□□□□ -0.84
VPS11-206ENST00000614944 TAF1DQ9H5J8 278 aaPredicted RBP9.78□□□□□ -0.84
VPS11-206ENST00000614944 MAP3K20Q9NYL2 800 aaKnown RBP9.78□□□□□ -0.84
VPS11-206ENST00000614944 RGL1Q9NZL6 768 aa9.78□□□□□ -0.84
VPS11-206ENST00000614944 POLR2AP24928 1970 aaKnown RBP9.78□□□□□ -0.84
VPS11-206ENST00000614944 A0A1W2PRG0 241 aa9.78□□□□□ -0.84
VPS11-206ENST00000614944 SKAP2O75563 359 aaPredicted RBP9.78□□□□□ -0.84
VPS11-206ENST00000614944 CLK2P49760 499 aaKnown RBP9.78□□□□□ -0.84
VPS11-206ENST00000614944 SLC39A14Q15043 492 aa9.78□□□□□ -0.84
VPS11-206ENST00000614944 RAB11FIP4Q86YS3 637 aa9.78□□□□□ -0.84
VPS11-206ENST00000614944 ADGRF4Q8IZF3 695 aa9.78□□□□□ -0.84
VPS11-206ENST00000614944 LRRC47Q8N1G4 583 aaKnown RBP9.78□□□□□ -0.84
VPS11-206ENST00000614944 LINC00301Q8NCQ3 95 aa9.78□□□□□ -0.84
VPS11-206ENST00000614944 NACA2Q9H009 215 aa9.78□□□□□ -0.84
VPS11-206ENST00000614944 ENO4A6NNW6 628 aa9.77□□□□□ -0.84
VPS11-206ENST00000614944 LAD1O00515 517 aa9.77□□□□□ -0.84
VPS11-206ENST00000614944 GDF11O95390 407 aa9.77□□□□□ -0.84
VPS11-206ENST00000614944 SLC1A4P43007 532 aa9.77□□□□□ -0.84
VPS11-206ENST00000614944 MAGEA10P43363 369 aaPredicted RBP9.77□□□□□ -0.84
VPS11-206ENST00000614944 TRPC1P48995 793 aa9.77□□□□□ -0.84
VPS11-206ENST00000614944 FKBP1BP68106 108 aa9.77□□□□□ -0.84
VPS11-206ENST00000614944 NAA25Q14CX7 972 aa9.77□□□□□ -0.84
VPS11-206ENST00000614944 PTPAQ15257 358 aa9.77□□□□□ -0.84
VPS11-206ENST00000614944 BLIDQ8IZY5 108 aa9.77□□□□□ -0.84
VPS11-206ENST00000614944 RBM46Q8TBY0 533 aaKnown RBP9.77□□□□□ -0.84
VPS11-206ENST00000614944 SPDL1Q96EA4 605 aa9.77□□□□□ -0.84
VPS11-206ENST00000614944 PHACTR1Q9C0D0 580 aa9.77□□□□□ -0.84
VPS11-206ENST00000614944 C6orf50Q9HD87 102 aa9.77□□□□□ -0.84
VPS11-206ENST00000614944 RIC8AQ9NPQ8 531 aa9.77□□□□□ -0.84
VPS11-206ENST00000614944 CNPY2Q9Y2B0 182 aa9.77□□□□□ -0.84
VPS11-206ENST00000614944 TRPM7Q96QT4 1865 aa9.77□□□□□ -0.85
VPS11-206ENST00000614944 POTECB2RU33 542 aa9.77□□□□□ -0.85
VPS11-206ENST00000614944 PIK3CDO00329 1044 aa9.77□□□□□ -0.85
VPS11-206ENST00000614944 CYP11B2P19099 503 aa9.77□□□□□ -0.85
VPS11-206ENST00000614944 DEUP1Q05D60 604 aa9.77□□□□□ -0.85
VPS11-206ENST00000614944 ERCC6LQ2NKX8 1250 aa9.77□□□□□ -0.85
VPS11-206ENST00000614944 NBPF12Q5TAG4 269 aaPredicted RBP9.77□□□□□ -0.85
VPS11-206ENST00000614944 SYDE2Q5VT97 1194 aa9.77□□□□□ -0.85
VPS11-206ENST00000614944 ANO1Q5XXA6 986 aa9.77□□□□□ -0.85
VPS11-206ENST00000614944 KRT25Q7Z3Z0 450 aa9.77□□□□□ -0.85
VPS11-206ENST00000614944 TMEM110Q86TL2 294 aa9.77□□□□□ -0.85
VPS11-206ENST00000614944 FAM114A1Q8IWE2 563 aa9.77□□□□□ -0.85
VPS11-206ENST00000614944 MIPOL1Q8TD10 442 aa9.77□□□□□ -0.85
VPS11-206ENST00000614944 FAM81BQ96LP2 452 aa9.77□□□□□ -0.85
VPS11-206ENST00000614944 AIFM3Q96NN9 605 aa9.77□□□□□ -0.85
VPS11-206ENST00000614944 ASTN2O75129 1339 aaPredicted RBP9.77□□□□□ -0.85
VPS11-206ENST00000614944 FRMD3A2A2Y4 597 aa9.77□□□□□ -0.85
VPS11-206ENST00000614944 F8VZ95 297 aa9.77□□□□□ -0.85
VPS11-206ENST00000614944 SLC26A4O43511 780 aa9.77□□□□□ -0.85
VPS11-206ENST00000614944 CDCA2Q69YH5 1023 aaPredicted RBP9.77□□□□□ -0.85
VPS11-206ENST00000614944 SPATA32Q96LK8 384 aa9.77□□□□□ -0.85
VPS11-206ENST00000614944 CCDC114Q96M63 670 aa9.77□□□□□ -0.85
VPS11-206ENST00000614944 USP2O75604 605 aaPredicted RBP9.76□□□□□ -0.85
VPS11-206ENST00000614944 OAZ1P54368 228 aa9.76□□□□□ -0.85
VPS11-206ENST00000614944 MPP3Q13368 585 aa9.76□□□□□ -0.85
VPS11-206ENST00000614944 ADALQ6DHV7 355 aa9.76□□□□□ -0.85
VPS11-206ENST00000614944 MOXD1Q6UVY6 613 aa9.76□□□□□ -0.85
VPS11-206ENST00000614944 SAPCD2Q86UD0 394 aa9.76□□□□□ -0.85
VPS11-206ENST00000614944 SULF1Q8IWU6 871 aa9.76□□□□□ -0.85
VPS11-206ENST00000614944 CACTIN-AS1Q8N1I8 211 aa9.76□□□□□ -0.85
VPS11-206ENST00000614944 DHRS1Q96LJ7 313 aa9.76□□□□□ -0.85
VPS11-206ENST00000614944 ADAMTS5Q9UNA0 930 aa9.76□□□□□ -0.85
VPS11-206ENST00000614944 PPME1Q9Y570 386 aa9.76□□□□□ -0.85
VPS11-206ENST00000614944 FAM196BA6NMK8 535 aa9.76□□□□□ -0.85
VPS11-206ENST00000614944 GOLGA6L19H0YKK7 550 aa9.76□□□□□ -0.85
VPS11-206ENST00000614944 MARCH6O60337 910 aa9.76□□□□□ -0.85
VPS11-206ENST00000614944 PPFIA4O75335 1185 aa9.76□□□□□ -0.85
VPS11-206ENST00000614944 PTPRAP18433 802 aa9.76□□□□□ -0.85
VPS11-206ENST00000614944 STAT2P52630 851 aa9.76□□□□□ -0.85
VPS11-206ENST00000614944 MAP3K9P80192 1104 aa9.76□□□□□ -0.85
VPS11-206ENST00000614944 ARHGAP29Q52LW3 1261 aa9.76□□□□□ -0.85
VPS11-206ENST00000614944 MICALCLQ6ZW33 695 aa9.76□□□□□ -0.85
VPS11-206ENST00000614944 POTEDQ86YR6 584 aa9.76□□□□□ -0.85
VPS11-206ENST00000614944 CDAN1Q8IWY9 1227 aa9.76□□□□□ -0.85
VPS11-206ENST00000614944 TAF4BQ92750 862 aa9.76□□□□□ -0.85
VPS11-206ENST00000614944 USP28Q96RU2 1077 aa9.76□□□□□ -0.85
VPS11-206ENST00000614944 MTRQ99707 1265 aa9.76□□□□□ -0.85
VPS11-206ENST00000614944 TMEM98Q9Y2Y6 226 aa9.76□□□□□ -0.85
VPS11-206ENST00000614944 ATP2A1O14983 1001 aa9.75□□□□□ -0.85
VPS11-206ENST00000614944 NLRP5P59047 1200 aa9.75□□□□□ -0.85
VPS11-206ENST00000614944 AP3B2Q13367 1082 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms