RNA–Protein interactions for RNA: ENST00000612417.4

CDH1-213, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 2,068 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-213ENST00000612417 MAP2K7O14733 419 aa16.36■□□□□ 0.21
CDH1-213ENST00000612417 TUBBP07437 444 aa16.36■□□□□ 0.21
CDH1-213ENST00000612417 HOXA7P31268 230 aaPredicted RBP16.36■□□□□ 0.21
CDH1-213ENST00000612417 ASIC1P78348 528 aa16.36■□□□□ 0.21
CDH1-213ENST00000612417 STK4Q13043 487 aa16.36■□□□□ 0.21
CDH1-213ENST00000612417 TNFAIP1Q13829 316 aa16.36■□□□□ 0.21
CDH1-213ENST00000612417 CNNM4Q6P4Q7 775 aa16.36■□□□□ 0.21
CDH1-213ENST00000612417 COA7Q96BR5 231 aa16.36■□□□□ 0.21
CDH1-213ENST00000612417 IQCDQ96DY2 449 aa16.36■□□□□ 0.21
CDH1-213ENST00000612417 MTMR9Q96QG7 549 aa16.36■□□□□ 0.21
CDH1-213ENST00000612417 ZSWIM4Q9H7M6 989 aa16.36■□□□□ 0.21
CDH1-213ENST00000612417 STK17AQ9UEE5 414 aa16.36■□□□□ 0.21
CDH1-213ENST00000612417 PNMA6FA0A0J9YX94 578 aa16.36■□□□□ 0.21
CDH1-213ENST00000612417 B4DLN1 442 aa16.36■□□□□ 0.21
CDH1-213ENST00000612417 USP17L10C9JJH3 530 aa16.36■□□□□ 0.21
CDH1-213ENST00000612417 TBC1D12O60347 775 aa16.36■□□□□ 0.21
CDH1-213ENST00000612417 LMNB1P20700 586 aa16.36■□□□□ 0.21
CDH1-213ENST00000612417 FXR2P51116 673 aaKnown RBP eCLIP16.36■□□□□ 0.21
CDH1-213ENST00000612417 IKQ13123 557 aaPredicted RBP16.36■□□□□ 0.21
CDH1-213ENST00000612417 ANKRD40Q6AI12 368 aa16.36■□□□□ 0.21
CDH1-213ENST00000612417 CALML4Q96GE6 196 aa16.36■□□□□ 0.21
CDH1-213ENST00000612417 CNOT6LQ96LI5 555 aaKnown RBP16.36■□□□□ 0.21
CDH1-213ENST00000612417 ERGIC2Q96RQ1 377 aa16.36■□□□□ 0.21
CDH1-213ENST00000612417 ARHGEF10LQ9HCE6 1279 aa16.36■□□□□ 0.21
CDH1-213ENST00000612417 MYO6Q9UM54 1294 aa16.36■□□□□ 0.21
CDH1-213ENST00000612417 A0A1W2PQJ5 194 aa16.35■□□□□ 0.21
CDH1-213ENST00000612417 CTAGE15A4D2H0 777 aa16.35■□□□□ 0.21
CDH1-213ENST00000612417 CTAGE8P0CG41 777 aa16.35■□□□□ 0.21
CDH1-213ENST00000612417 TECP42680 631 aa16.35■□□□□ 0.21
CDH1-213ENST00000612417 HERVK_113P62684 666 aa16.35■□□□□ 0.21
CDH1-213ENST00000612417 KRT83P78385 493 aa16.35■□□□□ 0.21
CDH1-213ENST00000612417 ZBED6P86452 979 aa16.35■□□□□ 0.21
CDH1-213ENST00000612417 CDK17Q00537 523 aa16.35■□□□□ 0.21
CDH1-213ENST00000612417 CTAGE6Q86UF2 777 aa16.35■□□□□ 0.21
CDH1-213ENST00000612417 CTAGE4Q8IX94 777 aa16.35■□□□□ 0.21
CDH1-213ENST00000612417 CCDC170Q8IYT3 715 aa16.35■□□□□ 0.21
CDH1-213ENST00000612417 ZBTB21Q9ULJ3 1066 aa16.35■□□□□ 0.21
CDH1-213ENST00000612417 RASSF10A6NK89 507 aa16.34■□□□□ 0.21
CDH1-213ENST00000612417 NDUFB10O96000 172 aa16.34■□□□□ 0.21
CDH1-213ENST00000612417 CYP2C19P33261 490 aa16.34■□□□□ 0.21
CDH1-213ENST00000612417 SMC1AQ14683 1233 aaKnown RBP16.34■□□□□ 0.21
CDH1-213ENST00000612417 MIIPQ5JXC2 388 aa16.34■□□□□ 0.21
CDH1-213ENST00000612417 BEND6Q5SZJ8 279 aaPredicted RBP16.34■□□□□ 0.21
CDH1-213ENST00000612417 CENPPQ6IPU0 288 aa16.34■□□□□ 0.21
CDH1-213ENST00000612417 TRAPPC11Q7Z392 1133 aa16.34■□□□□ 0.21
CDH1-213ENST00000612417 POTEDQ86YR6 584 aa16.34■□□□□ 0.21
CDH1-213ENST00000612417 KIAA0895Q8NCT3 520 aa16.34■□□□□ 0.21
CDH1-213ENST00000612417 EHBP1Q8NDI1 1231 aa16.34■□□□□ 0.21
CDH1-213ENST00000612417 GMCL1P1Q8NEA9 526 aa16.34■□□□□ 0.21
CDH1-213ENST00000612417 HACL1Q9UJ83 578 aa16.34■□□□□ 0.21
CDH1-213ENST00000612417 ASTN2O75129 1339 aaPredicted RBP16.34■□□□□ 0.21
CDH1-213ENST00000612417 SRCAPQ6ZRS2 3230 aa16.34■□□□□ 0.21
CDH1-213ENST00000612417 PVALEFA0A1B0GWK0 134 aa16.34■□□□□ 0.21
CDH1-213ENST00000612417 PES1O00541 588 aaKnown RBP16.34■□□□□ 0.21
CDH1-213ENST00000612417 ERLIN1O75477 346 aa16.34■□□□□ 0.21
CDH1-213ENST00000612417 TRIM21P19474 475 aaKnown RBP16.34■□□□□ 0.21
CDH1-213ENST00000612417 CYLC1P35663 651 aaPredicted RBP16.34■□□□□ 0.21
CDH1-213ENST00000612417 TBC1D8BQ0IIM8 1120 aa16.34■□□□□ 0.21
CDH1-213ENST00000612417 SPICE1Q8N0Z3 855 aa16.34■□□□□ 0.21
CDH1-213ENST00000612417 PNKPQ96T60 521 aa16.34■□□□□ 0.21
CDH1-213ENST00000612417 ABCB11O95342 1321 aa16.34■□□□□ 0.21
CDH1-213ENST00000612417 A0A1W2PRG0 241 aa16.33■□□□□ 0.21
CDH1-213ENST00000612417 EIF3CLB5ME19 914 aaKnown RBP16.33■□□□□ 0.21
CDH1-213ENST00000612417 ZBTB5O15062 677 aa16.33■□□□□ 0.21
CDH1-213ENST00000612417 FCER1AP12319 257 aa16.33■□□□□ 0.21
CDH1-213ENST00000612417 GRB10Q13322 594 aa16.33■□□□□ 0.21
CDH1-213ENST00000612417 TAF3Q5VWG9 929 aa16.33■□□□□ 0.21
CDH1-213ENST00000612417 PPP1R18Q6NYC8 613 aa16.33■□□□□ 0.21
CDH1-213ENST00000612417 SV2BQ7L1I2 683 aa16.33■□□□□ 0.21
CDH1-213ENST00000612417 GMCL1Q96IK5 515 aa16.33■□□□□ 0.21
CDH1-213ENST00000612417 EIF3CQ99613 913 aaKnown RBP16.33■□□□□ 0.21
CDH1-213ENST00000612417 BLOC1S4Q9NUP1 217 aa16.33■□□□□ 0.21
CDH1-213ENST00000612417 BIN2Q9UBW5 565 aaPredicted RBP16.33■□□□□ 0.21
CDH1-213ENST00000612417 PGAP2Q9UHJ9 254 aa16.33■□□□□ 0.21
CDH1-213ENST00000612417 GUCA1BQ9UMX6 200 aa16.33■□□□□ 0.21
CDH1-213ENST00000612417 DICER1Q9UPY3 1922 aaKnown RBP16.33■□□□□ 0.21
CDH1-213ENST00000612417 MYH7BA7E2Y1 1941 aa16.33■□□□□ 0.2
CDH1-213ENST00000612417 BMP3P12645 472 aa16.33■□□□□ 0.2
CDH1-213ENST00000612417 OAS2P29728 719 aaKnown RBP16.33■□□□□ 0.2
CDH1-213ENST00000612417 CAP2P40123 477 aa16.33■□□□□ 0.2
CDH1-213ENST00000612417 ECE1P42892 770 aa16.33■□□□□ 0.2
CDH1-213ENST00000612417 ADCY7P51828 1080 aa16.33■□□□□ 0.2
CDH1-213ENST00000612417 PDIA5Q14554 519 aa16.33■□□□□ 0.2
CDH1-213ENST00000612417 CALCRLQ16602 461 aa16.33■□□□□ 0.2
CDH1-213ENST00000612417 PAPD7Q5XG87 772 aaKnown RBP16.33■□□□□ 0.2
CDH1-213ENST00000612417 FOXR2Q6PJQ5 311 aa16.33■□□□□ 0.2
CDH1-213ENST00000612417 UNC13DQ70J99 1090 aa16.33■□□□□ 0.2
CDH1-213ENST00000612417 ACER1Q8TDN7 264 aa16.33■□□□□ 0.2
CDH1-213ENST00000612417 GOPCQ9HD26 462 aa16.33■□□□□ 0.2
CDH1-213ENST00000612417 AGPAT5Q9NUQ2 364 aa16.33■□□□□ 0.2
CDH1-213ENST00000612417 ZNHIT6Q9NWK9 470 aaKnown RBP16.33■□□□□ 0.2
CDH1-213ENST00000612417 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.33■□□□□ 0.2
CDH1-213ENST00000612417 SBF1O95248 1867 aa16.32■□□□□ 0.2
CDH1-213ENST00000612417 KRT86O43790 486 aa16.32■□□□□ 0.2
CDH1-213ENST00000612417 HNRNPH3P31942 346 aaKnown RBP16.32■□□□□ 0.2
CDH1-213ENST00000612417 MTIF2P46199 727 aaKnown RBP16.32■□□□□ 0.2
CDH1-213ENST00000612417 TMEM266Q2M3C6 531 aa16.32■□□□□ 0.2
CDH1-213ENST00000612417 NOC4LQ9BVI4 516 aaKnown RBP16.32■□□□□ 0.2
CDH1-213ENST00000612417 RAB34Q9BZG1 259 aa16.32■□□□□ 0.2
CDH1-213ENST00000612417 DEFB129Q9H1M3 183 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms