RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 PDGFDQ9GZP0 370 aaPredicted RBP13.3□□□□□ -0.28
USP6NL-206ENST00000609853 SEMA6BQ9H3T3 888 aa13.3□□□□□ -0.28
USP6NL-206ENST00000609853 VEZTQ9HBM0 779 aa13.3□□□□□ -0.28
USP6NL-206ENST00000609853 KIAA1024Q9UPX6 916 aa13.3□□□□□ -0.28
USP6NL-206ENST00000609853 A0A1W2PQJ5 194 aa13.3□□□□□ -0.28
USP6NL-206ENST00000609853 CASQ1P31415 396 aa13.3□□□□□ -0.28
USP6NL-206ENST00000609853 ECE1P42892 770 aa13.3□□□□□ -0.28
USP6NL-206ENST00000609853 CXCL9Q07325 125 aa13.3□□□□□ -0.28
USP6NL-206ENST00000609853 SPIRE1Q08AE8 756 aa13.3□□□□□ -0.28
USP6NL-206ENST00000609853 TBC1D8BQ0IIM8 1120 aa13.3□□□□□ -0.28
USP6NL-206ENST00000609853 TNFAIP1Q13829 316 aa13.3□□□□□ -0.28
USP6NL-206ENST00000609853 TUBB2AQ13885 445 aa13.3□□□□□ -0.28
USP6NL-206ENST00000609853 ECM1Q16610 540 aa13.3□□□□□ -0.28
USP6NL-206ENST00000609853 PRR16Q569H4 304 aa13.3□□□□□ -0.28
USP6NL-206ENST00000609853 DALRD3Q5D0E6 543 aaKnown RBP13.3□□□□□ -0.28
USP6NL-206ENST00000609853 KCNK18Q7Z418 384 aa13.3□□□□□ -0.28
USP6NL-206ENST00000609853 CCDC84Q86UT8 332 aaPredicted RBP13.3□□□□□ -0.28
USP6NL-206ENST00000609853 LENG9Q96B70 501 aa13.3□□□□□ -0.28
USP6NL-206ENST00000609853 TUBB2BQ9BVA1 445 aa13.3□□□□□ -0.28
USP6NL-206ENST00000609853 NOC4LQ9BVI4 516 aaKnown RBP13.3□□□□□ -0.28
USP6NL-206ENST00000609853 DEFB129Q9H1M3 183 aa13.3□□□□□ -0.28
USP6NL-206ENST00000609853 PANK4Q9NVE7 773 aa13.3□□□□□ -0.28
USP6NL-206ENST00000609853 CGNQ9P2M7 1197 aaKnown RBP13.3□□□□□ -0.28
USP6NL-206ENST00000609853 MYO1AQ9UBC5 1043 aa13.3□□□□□ -0.28
USP6NL-206ENST00000609853 PGAP2Q9UHJ9 254 aa13.3□□□□□ -0.28
USP6NL-206ENST00000609853 ZNF215Q9UL58 517 aaPredicted RBP13.3□□□□□ -0.28
USP6NL-206ENST00000609853 ZBTB12Q9Y330 459 aaPredicted RBP13.3□□□□□ -0.28
USP6NL-206ENST00000609853 RABGAP1Q9Y3P9 1069 aa13.3□□□□□ -0.28
USP6NL-206ENST00000609853 GCOM1H8Y6P7 765 aaPredicted RBP13.29□□□□□ -0.28
USP6NL-206ENST00000609853 PES1O00541 588 aaKnown RBP13.29□□□□□ -0.28
USP6NL-206ENST00000609853 OPLAHO14841 1288 aa13.29□□□□□ -0.28
USP6NL-206ENST00000609853 GNA14O95837 355 aa13.29□□□□□ -0.28
USP6NL-206ENST00000609853 POLR2MP0CAP2 368 aa13.29□□□□□ -0.28
USP6NL-206ENST00000609853 ZNF76P36508 570 aa13.29□□□□□ -0.28
USP6NL-206ENST00000609853 GNG11P61952 73 aa13.29□□□□□ -0.28
USP6NL-206ENST00000609853 COASYQ13057 564 aa13.29□□□□□ -0.28
USP6NL-206ENST00000609853 FAM26FQ5R3K3 315 aa13.29□□□□□ -0.28
USP6NL-206ENST00000609853 FAM83BQ5T0W9 1011 aa13.29□□□□□ -0.28
USP6NL-206ENST00000609853 RAD9BQ6WBX8 426 aa13.29□□□□□ -0.28
USP6NL-206ENST00000609853 ARHGAP27Q6ZUM4 889 aa13.29□□□□□ -0.28
USP6NL-206ENST00000609853 SPICE1Q8N0Z3 855 aa13.29□□□□□ -0.28
USP6NL-206ENST00000609853 ZNF397Q8NF99 534 aaPredicted RBP13.29□□□□□ -0.28
USP6NL-206ENST00000609853 ACER1Q8TDN7 264 aa13.29□□□□□ -0.28
USP6NL-206ENST00000609853 TSC1Q92574 1164 aa13.29□□□□□ -0.28
USP6NL-206ENST00000609853 POLR3CQ9BUI4 534 aaPredicted RBP13.29□□□□□ -0.28
USP6NL-206ENST00000609853 TAOK3Q9H2K8 898 aa13.29□□□□□ -0.28
USP6NL-206ENST00000609853 DNM3Q9UQ16 869 aa13.29□□□□□ -0.28
USP6NL-206ENST00000609853 TTC26A0AVF1 554 aa13.28□□□□□ -0.28
USP6NL-206ENST00000609853 FRMD3A2A2Y4 597 aa13.28□□□□□ -0.28
USP6NL-206ENST00000609853 B4DLN1 442 aa13.28□□□□□ -0.28
USP6NL-206ENST00000609853 WNT10BO00744 389 aa13.28□□□□□ -0.28
USP6NL-206ENST00000609853 KIF5CO60282 957 aa13.28□□□□□ -0.28
USP6NL-206ENST00000609853 MUTP22033 750 aa13.28□□□□□ -0.28
USP6NL-206ENST00000609853 POLD1P28340 1107 aa13.28□□□□□ -0.28
USP6NL-206ENST00000609853 ZNF280AP59817 542 aaPredicted RBP13.28□□□□□ -0.28
USP6NL-206ENST00000609853 ZBED6P86452 979 aa13.28□□□□□ -0.28
USP6NL-206ENST00000609853 FKBP3Q00688 224 aaKnown RBP13.28□□□□□ -0.28
USP6NL-206ENST00000609853 MAN2A1Q16706 1144 aa13.28□□□□□ -0.28
USP6NL-206ENST00000609853 PDCL2Q8N4E4 241 aa13.28□□□□□ -0.28
USP6NL-206ENST00000609853 CEP63Q96MT8 703 aa13.28□□□□□ -0.28
USP6NL-206ENST00000609853 P2RX7Q99572 595 aaKnown RBP13.28□□□□□ -0.28
USP6NL-206ENST00000609853 TMEM39BQ9GZU3 492 aa13.28□□□□□ -0.28
USP6NL-206ENST00000609853 MYOZ2Q9NPC6 264 aa13.28□□□□□ -0.28
USP6NL-206ENST00000609853 ZNHIT6Q9NWK9 470 aaKnown RBP13.28□□□□□ -0.28
USP6NL-206ENST00000609853 PNMA2Q9UL42 364 aa13.28□□□□□ -0.28
USP6NL-206ENST00000609853 BRCA1P38398 1863 aaKnown RBP13.28□□□□□ -0.28
USP6NL-206ENST00000609853 ATAD5Q96QE3 1844 aa13.28□□□□□ -0.28
USP6NL-206ENST00000609853 POTEB3A0JP26 581 aa13.27□□□□□ -0.28
USP6NL-206ENST00000609853 POTECB2RU33 542 aa13.27□□□□□ -0.28
USP6NL-206ENST00000609853 FAM86B1E9PN63 330 aa13.27□□□□□ -0.28
USP6NL-206ENST00000609853 MSH4O15457 936 aa13.27□□□□□ -0.28
USP6NL-206ENST00000609853 FAM86B2P0C5J1 330 aa13.27□□□□□ -0.28
USP6NL-206ENST00000609853 TRIM21P19474 475 aaKnown RBP13.27□□□□□ -0.28
USP6NL-206ENST00000609853 SLC12A3P55017 1021 aa13.27□□□□□ -0.28
USP6NL-206ENST00000609853 SNAP25P60880 206 aa13.27□□□□□ -0.28
USP6NL-206ENST00000609853 CDK17Q00537 523 aa13.27□□□□□ -0.28
USP6NL-206ENST00000609853 MEA1Q16626 185 aa13.27□□□□□ -0.28
USP6NL-206ENST00000609853 VWA3BQ502W6 1294 aa13.27□□□□□ -0.28
USP6NL-206ENST00000609853 MIIPQ5JXC2 388 aa13.27□□□□□ -0.28
USP6NL-206ENST00000609853 POTEBQ6S5H4 581 aa13.27□□□□□ -0.28
USP6NL-206ENST00000609853 DEFB132Q7Z7B7 95 aa13.27□□□□□ -0.28
USP6NL-206ENST00000609853 GPBP1Q86WP2 473 aa13.27□□□□□ -0.28
USP6NL-206ENST00000609853 SYT2Q8N9I0 419 aaPredicted RBP13.27□□□□□ -0.28
USP6NL-206ENST00000609853 LPAR1Q92633 364 aa13.27□□□□□ -0.28
USP6NL-206ENST00000609853 DESI2Q9BSY9 194 aa13.27□□□□□ -0.28
USP6NL-206ENST00000609853 TTYH3Q9C0H2 523 aa13.27□□□□□ -0.28
USP6NL-206ENST00000609853 E9PMD0 336 aa13.27□□□□□ -0.29
USP6NL-206ENST00000609853 MED24O75448 989 aa13.27□□□□□ -0.29
USP6NL-206ENST00000609853 URI1O94763 535 aaPredicted RBP13.27□□□□□ -0.29
USP6NL-206ENST00000609853 CYP11B2P19099 503 aa13.27□□□□□ -0.29
USP6NL-206ENST00000609853 ERVK-24P63145 666 aa13.27□□□□□ -0.29
USP6NL-206ENST00000609853 MTF1Q14872 753 aa13.27□□□□□ -0.29
USP6NL-206ENST00000609853 KIF4BQ2VIQ3 1234 aa13.27□□□□□ -0.29
USP6NL-206ENST00000609853 ZNF662Q6ZS27 426 aa13.27□□□□□ -0.29
USP6NL-206ENST00000609853 CATSPER3Q86XQ3 398 aa13.27□□□□□ -0.29
USP6NL-206ENST00000609853 CCDC125Q86Z20 511 aa13.27□□□□□ -0.29
USP6NL-206ENST00000609853 CCDC170Q8IYT3 715 aa13.27□□□□□ -0.29
USP6NL-206ENST00000609853 SAMD3Q8N6K7 520 aa13.27□□□□□ -0.29
USP6NL-206ENST00000609853 HPS3Q969F9 1004 aa13.27□□□□□ -0.29
USP6NL-206ENST00000609853 EDEM3Q9BZQ6 932 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms