RNA–Protein interactions for RNA: ENST00000607559.1

TPM2-208, Transcript of tropomyosin 2, humanhuman

TSL 2

Gene TPM2, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2-208ENST00000607559 GUCD1Q96NT3 240 aa12.4□□□□□ -0.42
TPM2-208ENST00000607559 TRPV6Q9H1D0 765 aa12.4□□□□□ -0.42
TPM2-208ENST00000607559 IL23AQ9NPF7 189 aa12.4□□□□□ -0.42
TPM2-208ENST00000607559 NCOR1O75376 2440 aa12.4□□□□□ -0.42
TPM2-208ENST00000607559 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.39□□□□□ -0.43
TPM2-208ENST00000607559 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.39□□□□□ -0.43
TPM2-208ENST00000607559 HAS3O00219 553 aa12.39□□□□□ -0.43
TPM2-208ENST00000607559 MEIS2O14770 477 aa12.39□□□□□ -0.43
TPM2-208ENST00000607559 HMGB1P09429 215 aaKnown RBP12.39□□□□□ -0.43
TPM2-208ENST00000607559 CSF2RAP15509 400 aa12.39□□□□□ -0.43
TPM2-208ENST00000607559 EIF2AK2P19525 551 aaKnown RBP12.39□□□□□ -0.43
TPM2-208ENST00000607559 PSMC6P62333 389 aa12.39□□□□□ -0.43
TPM2-208ENST00000607559 KRT32Q14532 448 aa12.39□□□□□ -0.43
TPM2-208ENST00000607559 LY6KQ17RY6 165 aa12.39□□□□□ -0.43
TPM2-208ENST00000607559 MYSM1Q5VVJ2 828 aa12.39□□□□□ -0.43
TPM2-208ENST00000607559 SEPT14Q6ZU15 432 aa12.39□□□□□ -0.43
TPM2-208ENST00000607559 DHX32Q7L7V1 743 aaKnown RBP12.39□□□□□ -0.43
TPM2-208ENST00000607559 PPTC7Q8NI37 304 aa12.39□□□□□ -0.43
TPM2-208ENST00000607559 AFG1LQ8WV93 481 aa12.39□□□□□ -0.43
TPM2-208ENST00000607559 HERVK_113Q902F9 699 aa12.39□□□□□ -0.43
TPM2-208ENST00000607559 KAT2BQ92831 832 aa12.39□□□□□ -0.43
TPM2-208ENST00000607559 RRP36Q96EU6 259 aaKnown RBP12.39□□□□□ -0.43
TPM2-208ENST00000607559 INPP4AQ96PE3 977 aaPredicted RBP12.39□□□□□ -0.43
TPM2-208ENST00000607559 NEK1Q96PY6 1258 aa12.39□□□□□ -0.43
TPM2-208ENST00000607559 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.39□□□□□ -0.43
TPM2-208ENST00000607559 SEMA6BQ9H3T3 888 aa12.39□□□□□ -0.43
TPM2-208ENST00000607559 HIPK3Q9H422 1215 aa12.39□□□□□ -0.43
TPM2-208ENST00000607559 PRUNE2Q8WUY3 3088 aa12.39□□□□□ -0.43
TPM2-208ENST00000607559 SCN10AQ9Y5Y9 1956 aa12.38□□□□□ -0.43
TPM2-208ENST00000607559 CCDC69A6NI79 296 aa12.38□□□□□ -0.43
TPM2-208ENST00000607559 MMP3P08254 477 aa12.38□□□□□ -0.43
TPM2-208ENST00000607559 CASTP20810 708 aaKnown RBP12.38□□□□□ -0.43
TPM2-208ENST00000607559 HOXA13P31271 388 aaPredicted RBP12.38□□□□□ -0.43
TPM2-208ENST00000607559 CYP2C18P33260 490 aa12.38□□□□□ -0.43
TPM2-208ENST00000607559 MRPS9P82933 396 aaKnown RBP12.38□□□□□ -0.43
TPM2-208ENST00000607559 SP2Q02086 613 aa12.38□□□□□ -0.43
TPM2-208ENST00000607559 RBL2Q08999 1139 aa12.38□□□□□ -0.43
TPM2-208ENST00000607559 FUT2Q10981 343 aa12.38□□□□□ -0.43
TPM2-208ENST00000607559 DGKDQ16760 1214 aa12.38□□□□□ -0.43
TPM2-208ENST00000607559 CELF3Q5SZQ8 465 aaKnown RBP12.38□□□□□ -0.43
TPM2-208ENST00000607559 PSRC1Q6PGN9 363 aaPredicted RBP12.38□□□□□ -0.43
TPM2-208ENST00000607559 SKAP1Q86WV1 359 aa12.38□□□□□ -0.43
TPM2-208ENST00000607559 HOMER1Q86YM7 354 aa12.38□□□□□ -0.43
TPM2-208ENST00000607559 FAM161BQ96MY7 647 aa12.38□□□□□ -0.43
TPM2-208ENST00000607559 CTAGE1Q96RT6 745 aa12.38□□□□□ -0.43
TPM2-208ENST00000607559 SENP7Q9BQF6 1050 aa12.38□□□□□ -0.43
TPM2-208ENST00000607559 SLC12A7Q9Y666 1083 aa12.38□□□□□ -0.43
TPM2-208ENST00000607559 CDH23Q9H251 3354 aa12.38□□□□□ -0.43
TPM2-208ENST00000607559 SPATA31C2B4DYI2 1134 aa12.37□□□□□ -0.43
TPM2-208ENST00000607559 PLEKHA8P1O95397 391 aa12.37□□□□□ -0.43
TPM2-208ENST00000607559 F2P00734 622 aa12.37□□□□□ -0.43
TPM2-208ENST00000607559 PFKMP08237 780 aa12.37□□□□□ -0.43
TPM2-208ENST00000607559 MYL3P08590 195 aa12.37□□□□□ -0.43
TPM2-208ENST00000607559 CCND2P30279 289 aa12.37□□□□□ -0.43
TPM2-208ENST00000607559 ERICH6BQ5W0A0 696 aa12.37□□□□□ -0.43
TPM2-208ENST00000607559 PCNX4Q63HM2 1172 aa12.37□□□□□ -0.43
TPM2-208ENST00000607559 APOA5Q6Q788 366 aa12.37□□□□□ -0.43
TPM2-208ENST00000607559 TMTC3Q6ZXV5 915 aa12.37□□□□□ -0.43
TPM2-208ENST00000607559 ZNF365Q70YC5 407 aa12.37□□□□□ -0.43
TPM2-208ENST00000607559 RPUSD2Q8IZ73 545 aaKnown RBP12.37□□□□□ -0.43
TPM2-208ENST00000607559 IL31RAQ8NI17 732 aa12.37□□□□□ -0.43
TPM2-208ENST00000607559 CCDC136Q96JN2 1154 aa12.37□□□□□ -0.43
TPM2-208ENST00000607559 CDX2Q99626 313 aaPredicted RBP12.37□□□□□ -0.43
TPM2-208ENST00000607559 MYL10Q9BUA6 226 aa12.37□□□□□ -0.43
TPM2-208ENST00000607559 AGXT2Q9BYV1 514 aa12.37□□□□□ -0.43
TPM2-208ENST00000607559 WNT8AQ9H1J5 351 aa12.37□□□□□ -0.43
TPM2-208ENST00000607559 MRVI1Q9Y6F6 885 aa12.37□□□□□ -0.43
TPM2-208ENST00000607559 FGBP02675 491 aa12.36□□□□□ -0.43
TPM2-208ENST00000607559 HOXC8P31273 242 aa12.36□□□□□ -0.43
TPM2-208ENST00000607559 HSPA4P34932 840 aa12.36□□□□□ -0.43
TPM2-208ENST00000607559 ADCK5Q3MIX3 580 aa12.36□□□□□ -0.43
TPM2-208ENST00000607559 TMEM92Q6UXU6 159 aa12.36□□□□□ -0.43
TPM2-208ENST00000607559 NFXL1Q6ZNB6 911 aa12.36□□□□□ -0.43
TPM2-208ENST00000607559 DHX37Q8IY37 1157 aaKnown RBP12.36□□□□□ -0.43
TPM2-208ENST00000607559 FAM217BQ9NTX9 383 aaPredicted RBP12.36□□□□□ -0.43
TPM2-208ENST00000607559 TRMT13Q9NUP7 481 aaKnown RBP12.36□□□□□ -0.43
TPM2-208ENST00000607559 RBM28Q9NW13 759 aaKnown RBP12.36□□□□□ -0.43
TPM2-208ENST00000607559 CHD9Q3L8U1 2897 aa12.36□□□□□ -0.43
TPM2-208ENST00000607559 UMODL1Q5DID0 1318 aa12.36□□□□□ -0.43
TPM2-208ENST00000607559 VCANP13611 3396 aa12.35□□□□□ -0.43
TPM2-208ENST00000607559 MAFGO15525 162 aa12.35□□□□□ -0.43
TPM2-208ENST00000607559 MYCLP12524 364 aaPredicted RBP12.35□□□□□ -0.43
TPM2-208ENST00000607559 RFC2P35250 354 aa12.35□□□□□ -0.43
TPM2-208ENST00000607559 EVCP57679 992 aa12.35□□□□□ -0.43
TPM2-208ENST00000607559 HSDL1Q3SXM5 330 aa12.35□□□□□ -0.43
TPM2-208ENST00000607559 GNPTABQ3T906 1256 aa12.35□□□□□ -0.43
TPM2-208ENST00000607559 USP17L6PQ6QN14 398 aa12.35□□□□□ -0.43
TPM2-208ENST00000607559 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.35□□□□□ -0.43
TPM2-208ENST00000607559 C16orf70Q9BSU1 422 aa12.35□□□□□ -0.43
TPM2-208ENST00000607559 KATNAL1Q9BW62 490 aa12.35□□□□□ -0.43
TPM2-208ENST00000607559 PPP1R12CQ9BZL4 782 aa12.35□□□□□ -0.43
TPM2-208ENST00000607559 TTYH1Q9H313 450 aaPredicted RBP12.35□□□□□ -0.43
TPM2-208ENST00000607559 PSTPIP2Q9H939 334 aa12.35□□□□□ -0.43
TPM2-208ENST00000607559 SEC63Q9UGP8 760 aaKnown RBP12.35□□□□□ -0.43
TPM2-208ENST00000607559 BRPF3Q9ULD4 1205 aa12.35□□□□□ -0.43
TPM2-208ENST00000607559 EYSQ5T1H1 3165 aa12.34□□□□□ -0.43
TPM2-208ENST00000607559 hCG_1984214I3L0E3 225 aa12.34□□□□□ -0.43
TPM2-208ENST00000607559 FIBPO43427 364 aa12.34□□□□□ -0.43
TPM2-208ENST00000607559 PARNO95453 639 aaKnown RBP12.34□□□□□ -0.43
TPM2-208ENST00000607559 UBA1P22314 1058 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms