RNA–Protein interactions for RNA: ENST00000607049.5

PKNOX1-210, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-210ENST00000607049 BRF1Q92994 677 aa16.54■□□□□ 0.24
PKNOX1-210ENST00000607049 INPP4AQ96PE3 977 aaPredicted RBP16.54■□□□□ 0.24
PKNOX1-210ENST00000607049 NOC4LQ9BVI4 516 aaKnown RBP16.54■□□□□ 0.24
PKNOX1-210ENST00000607049 IL23AQ9NPF7 189 aa16.54■□□□□ 0.24
PKNOX1-210ENST00000607049 TRMT13Q9NUP7 481 aaKnown RBP16.54■□□□□ 0.24
PKNOX1-210ENST00000607049 V9GY48 417 aaPredicted RBP16.54■□□□□ 0.24
PKNOX1-210ENST00000607049 LTBP2Q14767 1821 aa16.54■□□□□ 0.24
PKNOX1-210ENST00000607049 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.53■□□□□ 0.24
PKNOX1-210ENST00000607049 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.53■□□□□ 0.24
PKNOX1-210ENST00000607049 MEIS2O14770 477 aa16.53■□□□□ 0.24
PKNOX1-210ENST00000607049 RGS20O76081 388 aa16.53■□□□□ 0.24
PKNOX1-210ENST00000607049 FOSP01100 380 aaPredicted RBP16.53■□□□□ 0.24
PKNOX1-210ENST00000607049 FGBP02675 491 aa16.53■□□□□ 0.24
PKNOX1-210ENST00000607049 PFKMP08237 780 aa16.53■□□□□ 0.24
PKNOX1-210ENST00000607049 UBA1P22314 1058 aaKnown RBP16.53■□□□□ 0.24
PKNOX1-210ENST00000607049 RPS6KB1P23443 525 aa16.53■□□□□ 0.24
PKNOX1-210ENST00000607049 ICAM3P32942 547 aa16.53■□□□□ 0.24
PKNOX1-210ENST00000607049 CCL23P55773 120 aa16.53■□□□□ 0.24
PKNOX1-210ENST00000607049 COL9A3Q14050 684 aaPredicted RBP16.53■□□□□ 0.24
PKNOX1-210ENST00000607049 PTGISQ16647 500 aa16.53■□□□□ 0.24
PKNOX1-210ENST00000607049 CCDC12Q8WUD4 166 aaPredicted RBP16.53■□□□□ 0.24
PKNOX1-210ENST00000607049 RTEL1Q9NZ71 1219 aa16.53■□□□□ 0.24
PKNOX1-210ENST00000607049 CYP46A1Q9Y6A2 500 aa16.53■□□□□ 0.24
PKNOX1-210ENST00000607049 CNTNAP5Q8WYK1 1306 aa16.52■□□□□ 0.24
PKNOX1-210ENST00000607049 SPATA31C2B4DYI2 1134 aa16.52■□□□□ 0.24
PKNOX1-210ENST00000607049 PITPNM1O00562 1244 aa16.52■□□□□ 0.24
PKNOX1-210ENST00000607049 CYP2C9P11712 490 aa16.52■□□□□ 0.24
PKNOX1-210ENST00000607049 RFC2P35250 354 aa16.52■□□□□ 0.24
PKNOX1-210ENST00000607049 PSEN2P49810 448 aa16.52■□□□□ 0.24
PKNOX1-210ENST00000607049 ADCY7P51828 1080 aa16.52■□□□□ 0.24
PKNOX1-210ENST00000607049 EPHB4P54760 987 aa16.52■□□□□ 0.24
PKNOX1-210ENST00000607049 APOBRQ0VD83 1088 aa16.52■□□□□ 0.24
PKNOX1-210ENST00000607049 MFSD10Q14728 455 aa16.52■□□□□ 0.24
PKNOX1-210ENST00000607049 METTL7BQ6UX53 244 aa16.52■□□□□ 0.24
PKNOX1-210ENST00000607049 SESTD1Q86VW0 696 aa16.52■□□□□ 0.24
PKNOX1-210ENST00000607049 FBXL16Q8N461 479 aa16.52■□□□□ 0.24
PKNOX1-210ENST00000607049 GPKOWQ92917 476 aaPredicted RBP eCLIP16.52■□□□□ 0.24
PKNOX1-210ENST00000607049 SENP7Q9BQF6 1050 aa16.52■□□□□ 0.24
PKNOX1-210ENST00000607049 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.52■□□□□ 0.24
PKNOX1-210ENST00000607049 MAFGO15525 162 aa16.51■□□□□ 0.23
PKNOX1-210ENST00000607049 F2P00734 622 aa16.51■□□□□ 0.23
PKNOX1-210ENST00000607049 ACTN1P12814 892 aa16.51■□□□□ 0.23
PKNOX1-210ENST00000607049 CPA1P15085 419 aa16.51■□□□□ 0.23
PKNOX1-210ENST00000607049 MRPS9P82933 396 aaKnown RBP16.51■□□□□ 0.23
PKNOX1-210ENST00000607049 KIAA0753Q2KHM9 967 aa16.51■□□□□ 0.23
PKNOX1-210ENST00000607049 HSDL1Q3SXM5 330 aa16.51■□□□□ 0.23
PKNOX1-210ENST00000607049 TMEM240Q5SV17 173 aa16.51■□□□□ 0.23
PKNOX1-210ENST00000607049 WWC2Q6AWC2 1192 aa16.51■□□□□ 0.23
PKNOX1-210ENST00000607049 MCTP2Q6DN12 878 aa16.51■□□□□ 0.23
PKNOX1-210ENST00000607049 ZNF365Q70YC5 407 aa16.51■□□□□ 0.23
PKNOX1-210ENST00000607049 CAGE1Q8TC20 777 aa16.51■□□□□ 0.23
PKNOX1-210ENST00000607049 GPRASP2Q96D09 838 aa16.51■□□□□ 0.23
PKNOX1-210ENST00000607049 ZFP91Q96JP5 570 aaPredicted RBP16.51■□□□□ 0.23
PKNOX1-210ENST00000607049 ALG1Q9BT22 464 aa16.51■□□□□ 0.23
PKNOX1-210ENST00000607049 USP26Q9BXU7 913 aa16.51■□□□□ 0.23
PKNOX1-210ENST00000607049 RIC8AQ9NPQ8 531 aa16.51■□□□□ 0.23
PKNOX1-210ENST00000607049 ZNF215Q9UL58 517 aaPredicted RBP16.51■□□□□ 0.23
PKNOX1-210ENST00000607049 PCDHA6Q9UN73 950 aa16.51■□□□□ 0.23
PKNOX1-210ENST00000607049 PCDHA8Q9Y5H6 950 aa16.51■□□□□ 0.23
PKNOX1-210ENST00000607049 LAMA3Q16787 3333 aa16.5■□□□□ 0.23
PKNOX1-210ENST00000607049 SMCO2A6NFE2 343 aa16.5■□□□□ 0.23
PKNOX1-210ENST00000607049 SORBS3O60504 671 aa16.5■□□□□ 0.23
PKNOX1-210ENST00000607049 PARNO95453 639 aaKnown RBP16.5■□□□□ 0.23
PKNOX1-210ENST00000607049 ZNF286BP0CG31 522 aa16.5■□□□□ 0.23
PKNOX1-210ENST00000607049 ACRP10323 421 aa16.5■□□□□ 0.23
PKNOX1-210ENST00000607049 UBE2SQ16763 222 aa16.5■□□□□ 0.23
PKNOX1-210ENST00000607049 RUFY3Q7L099 469 aa16.5■□□□□ 0.23
PKNOX1-210ENST00000607049 CYFIP1Q7L576 1253 aa16.5■□□□□ 0.23
PKNOX1-210ENST00000607049 KAT2BQ92831 832 aa16.5■□□□□ 0.23
PKNOX1-210ENST00000607049 BARHL2Q9NY43 387 aa16.5■□□□□ 0.23
PKNOX1-210ENST00000607049 GTF2IRD1Q9UHL9 959 aa16.5■□□□□ 0.23
PKNOX1-210ENST00000607049 TMEM265A0A087WTH1 108 aa16.49■□□□□ 0.23
PKNOX1-210ENST00000607049 GNAT1P11488 350 aa16.49■□□□□ 0.23
PKNOX1-210ENST00000607049 HOXD8P13378 290 aaPredicted RBP16.49■□□□□ 0.23
PKNOX1-210ENST00000607049 ADD1P35611 737 aaKnown RBP16.49■□□□□ 0.23
PKNOX1-210ENST00000607049 SP2Q02086 613 aa16.49■□□□□ 0.23
PKNOX1-210ENST00000607049 AP3B2Q13367 1082 aa16.49■□□□□ 0.23
PKNOX1-210ENST00000607049 MTMR1Q13613 665 aa16.49■□□□□ 0.23
PKNOX1-210ENST00000607049 PFKFB3Q16875 520 aaPredicted RBP16.49■□□□□ 0.23
PKNOX1-210ENST00000607049 CPLX2Q6PUV4 134 aaKnown RBP16.49■□□□□ 0.23
PKNOX1-210ENST00000607049 Q7L0L9 218 aa16.49■□□□□ 0.23
PKNOX1-210ENST00000607049 AFAP1L1Q8TED9 768 aa16.49■□□□□ 0.23
PKNOX1-210ENST00000607049 HERVK_113Q902F9 699 aa16.49■□□□□ 0.23
PKNOX1-210ENST00000607049 TM6SF1Q9BZW5 370 aa16.49■□□□□ 0.23
PKNOX1-210ENST00000607049 C6orf50Q9HD87 102 aa16.49■□□□□ 0.23
PKNOX1-210ENST00000607049 MTMR10Q9NXD2 777 aa16.49■□□□□ 0.23
PKNOX1-210ENST00000607049 UMODL1Q5DID0 1318 aa16.48■□□□□ 0.23
PKNOX1-210ENST00000607049 H3BRB1 525 aa16.48■□□□□ 0.23
PKNOX1-210ENST00000607049 CPLX1O14810 134 aa16.48■□□□□ 0.23
PKNOX1-210ENST00000607049 SCG2P13521 617 aa16.48■□□□□ 0.23
PKNOX1-210ENST00000607049 GNA11P29992 359 aa16.48■□□□□ 0.23
PKNOX1-210ENST00000607049 CDC27P30260 824 aa16.48■□□□□ 0.23
PKNOX1-210ENST00000607049 ZNF76P36508 570 aa16.48■□□□□ 0.23
PKNOX1-210ENST00000607049 FUT2Q10981 343 aa16.48■□□□□ 0.23
PKNOX1-210ENST00000607049 OTOP2Q7RTS6 562 aa16.48■□□□□ 0.23
PKNOX1-210ENST00000607049 TRIM22Q8IYM9 498 aa16.48■□□□□ 0.23
PKNOX1-210ENST00000607049 SCLYQ96I15 445 aa16.48■□□□□ 0.23
PKNOX1-210ENST00000607049 FTOQ9C0B1 505 aaKnown RBP eCLIP16.48■□□□□ 0.23
PKNOX1-210ENST00000607049 WNT8AQ9H1J5 351 aa16.48■□□□□ 0.23
PKNOX1-210ENST00000607049 TUT1Q9H6E5 874 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms