RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 KPNA6O60684 536 aa14.67□□□□□ -0.06
SHROOM1-207ENST00000606676 PFKFB2O60825 505 aa14.67□□□□□ -0.06
SHROOM1-207ENST00000606676 HOXD8P13378 290 aaPredicted RBP14.67□□□□□ -0.06
SHROOM1-207ENST00000606676 NEK4P51957 841 aa14.67□□□□□ -0.06
SHROOM1-207ENST00000606676 MDM2Q00987 491 aaPredicted RBP14.67□□□□□ -0.06
SHROOM1-207ENST00000606676 SCRN1Q12765 414 aa14.67□□□□□ -0.06
SHROOM1-207ENST00000606676 GNPTABQ3T906 1256 aa14.67□□□□□ -0.06
SHROOM1-207ENST00000606676 BRDTQ58F21 947 aaPredicted RBP14.67□□□□□ -0.06
SHROOM1-207ENST00000606676 FAM126BQ8IXS8 530 aa14.67□□□□□ -0.06
SHROOM1-207ENST00000606676 DHX37Q8IY37 1157 aaKnown RBP14.67□□□□□ -0.06
SHROOM1-207ENST00000606676 PGBD1Q96JS3 809 aa14.67□□□□□ -0.06
SHROOM1-207ENST00000606676 GLT8D2Q9H1C3 349 aa14.67□□□□□ -0.06
SHROOM1-207ENST00000606676 PRDM5Q9NQX1 630 aaPredicted RBP14.67□□□□□ -0.06
SHROOM1-207ENST00000606676 TMEM260Q9NX78 707 aa14.67□□□□□ -0.06
SHROOM1-207ENST00000606676 PRKAG2Q9UGJ0 569 aa14.67□□□□□ -0.06
SHROOM1-207ENST00000606676 MROH7Q68CQ1 1323 aa14.66□□□□□ -0.06
SHROOM1-207ENST00000606676 TRIOBPQ9H2D6 2365 aa14.66□□□□□ -0.06
SHROOM1-207ENST00000606676 FIBPO43427 364 aa14.66□□□□□ -0.06
SHROOM1-207ENST00000606676 SORBS3O60504 671 aa14.66□□□□□ -0.06
SHROOM1-207ENST00000606676 GGPS1O95749 300 aa14.66□□□□□ -0.06
SHROOM1-207ENST00000606676 FOSP01100 380 aaPredicted RBP14.66□□□□□ -0.06
SHROOM1-207ENST00000606676 CD4P01730 458 aa14.66□□□□□ -0.06
SHROOM1-207ENST00000606676 ITGB5P18084 799 aa14.66□□□□□ -0.06
SHROOM1-207ENST00000606676 AKAP17AQ02040 695 aaKnown RBP14.66□□□□□ -0.06
SHROOM1-207ENST00000606676 SSRP1Q08945 709 aaKnown RBP14.66□□□□□ -0.06
SHROOM1-207ENST00000606676 ANKRD1Q15327 319 aa14.66□□□□□ -0.06
SHROOM1-207ENST00000606676 NBPF20Q3BBV1 942 aa14.66□□□□□ -0.06
SHROOM1-207ENST00000606676 HSDL1Q3SXM5 330 aa14.66□□□□□ -0.06
SHROOM1-207ENST00000606676 PPTC7Q8NI37 304 aa14.66□□□□□ -0.06
SHROOM1-207ENST00000606676 KAT2BQ92831 832 aa14.66□□□□□ -0.06
SHROOM1-207ENST00000606676 KIF2CQ99661 725 aa14.66□□□□□ -0.06
SHROOM1-207ENST00000606676 SEZ6LQ9BYH1 1024 aa14.66□□□□□ -0.06
SHROOM1-207ENST00000606676 ANO3Q9BYT9 981 aa14.66□□□□□ -0.06
SHROOM1-207ENST00000606676 TMEM39AQ9NV64 488 aa14.66□□□□□ -0.06
SHROOM1-207ENST00000606676 TBX21Q9UL17 535 aa14.66□□□□□ -0.06
SHROOM1-207ENST00000606676 UBIAD1Q9Y5Z9 338 aa14.66□□□□□ -0.06
SHROOM1-207ENST00000606676 CPLX1O14810 134 aa14.65□□□□□ -0.06
SHROOM1-207ENST00000606676 LARGE1O95461 756 aa14.65□□□□□ -0.06
SHROOM1-207ENST00000606676 CTDNEP1O95476 244 aa14.65□□□□□ -0.06
SHROOM1-207ENST00000606676 AP3B2Q13367 1082 aa14.65□□□□□ -0.06
SHROOM1-207ENST00000606676 DGKDQ16760 1214 aa14.65□□□□□ -0.06
SHROOM1-207ENST00000606676 CCDC12Q8WUD4 166 aaPredicted RBP14.65□□□□□ -0.06
SHROOM1-207ENST00000606676 PPP1R13LQ8WUF5 828 aa14.65□□□□□ -0.06
SHROOM1-207ENST00000606676 BADQ92934 168 aa14.65□□□□□ -0.06
SHROOM1-207ENST00000606676 GPRASP2Q96D09 838 aa14.65□□□□□ -0.06
SHROOM1-207ENST00000606676 SPATA33Q96N06 139 aa14.65□□□□□ -0.06
SHROOM1-207ENST00000606676 TRPV6Q9H1D0 765 aa14.65□□□□□ -0.06
SHROOM1-207ENST00000606676 SLKQ9H2G2 1235 aaPredicted RBP14.65□□□□□ -0.06
SHROOM1-207ENST00000606676 JADE2Q9NQC1 790 aa14.65□□□□□ -0.06
SHROOM1-207ENST00000606676 VPS54Q9P1Q0 977 aa14.65□□□□□ -0.06
SHROOM1-207ENST00000606676 TELO2Q9Y4R8 837 aa14.65□□□□□ -0.06
SHROOM1-207ENST00000606676 B4GALT4O60513 344 aa14.64□□□□□ -0.07
SHROOM1-207ENST00000606676 DTNBO60941 627 aa14.64□□□□□ -0.07
SHROOM1-207ENST00000606676 ATP9AO75110 1047 aa14.64□□□□□ -0.07
SHROOM1-207ENST00000606676 PPFIA4O75335 1185 aa14.64□□□□□ -0.07
SHROOM1-207ENST00000606676 DEXIO95424 95 aa14.64□□□□□ -0.07
SHROOM1-207ENST00000606676 SREBF1P36956 1147 aa14.64□□□□□ -0.07
SHROOM1-207ENST00000606676 NEDD9Q14511 834 aa14.64□□□□□ -0.07
SHROOM1-207ENST00000606676 ME3Q16798 604 aa14.64□□□□□ -0.07
SHROOM1-207ENST00000606676 JAKMIP3Q5VZ66 844 aa14.64□□□□□ -0.07
SHROOM1-207ENST00000606676 CYFIP1Q7L576 1253 aa14.64□□□□□ -0.07
SHROOM1-207ENST00000606676 NLRX1Q86UT6 975 aa14.64□□□□□ -0.07
SHROOM1-207ENST00000606676 TRIM22Q8IYM9 498 aa14.64□□□□□ -0.07
SHROOM1-207ENST00000606676 CYP2W1Q8TAV3 490 aa14.64□□□□□ -0.07
SHROOM1-207ENST00000606676 CRYGNQ8WXF5 182 aa14.64□□□□□ -0.07
SHROOM1-207ENST00000606676 AIFM3Q96NN9 605 aa14.64□□□□□ -0.07
SHROOM1-207ENST00000606676 LBHD1Q9BQE6 289 aaPredicted RBP14.64□□□□□ -0.07
SHROOM1-207ENST00000606676 SENP7Q9BQF6 1050 aa14.64□□□□□ -0.07
SHROOM1-207ENST00000606676 MXRA8Q9BRK3 442 aa14.64□□□□□ -0.07
SHROOM1-207ENST00000606676 EHMT1Q9H9B1 1298 aa14.64□□□□□ -0.07
SHROOM1-207ENST00000606676 MLXIPQ9HAP2 919 aa14.64□□□□□ -0.07
SHROOM1-207ENST00000606676 C6orf50Q9HD87 102 aa14.64□□□□□ -0.07
SHROOM1-207ENST00000606676 SH3GLB2Q9NR46 395 aa14.64□□□□□ -0.07
SHROOM1-207ENST00000606676 A0A1W2PPC1 479 aa14.63□□□□□ -0.07
SHROOM1-207ENST00000606676 TIMP1P01033 207 aa14.63□□□□□ -0.07
SHROOM1-207ENST00000606676 RAG1P15918 1043 aa14.63□□□□□ -0.07
SHROOM1-207ENST00000606676 KCNA2P16389 499 aa14.63□□□□□ -0.07
SHROOM1-207ENST00000606676 GNA11P29992 359 aa14.63□□□□□ -0.07
SHROOM1-207ENST00000606676 MTMR1Q13613 665 aa14.63□□□□□ -0.07
SHROOM1-207ENST00000606676 NFRKBQ6P4R8 1299 aa14.63□□□□□ -0.07
SHROOM1-207ENST00000606676 CPLX2Q6PUV4 134 aaKnown RBP14.63□□□□□ -0.07
SHROOM1-207ENST00000606676 METTL7BQ6UX53 244 aa14.63□□□□□ -0.07
SHROOM1-207ENST00000606676 REXO1Q8N1G1 1221 aaKnown RBP14.63□□□□□ -0.07
SHROOM1-207ENST00000606676 NECAB1Q8N987 351 aa14.63□□□□□ -0.07
SHROOM1-207ENST00000606676 RASGRP4Q8TDF6 673 aa14.63□□□□□ -0.07
SHROOM1-207ENST00000606676 C22orf23Q9BZE7 217 aa14.63□□□□□ -0.07
SHROOM1-207ENST00000606676 UBE2OQ9C0C9 1292 aaKnown RBP14.63□□□□□ -0.07
SHROOM1-207ENST00000606676 TRMT13Q9NUP7 481 aaKnown RBP14.63□□□□□ -0.07
SHROOM1-207ENST00000606676 SCN10AQ9Y5Y9 1956 aa14.63□□□□□ -0.07
SHROOM1-207ENST00000606676 LTBP2Q14767 1821 aa14.62□□□□□ -0.07
SHROOM1-207ENST00000606676 HAS3O00219 553 aa14.62□□□□□ -0.07
SHROOM1-207ENST00000606676 MEIS1O00470 390 aa14.62□□□□□ -0.07
SHROOM1-207ENST00000606676 TLR3O15455 904 aaKnown RBP14.62□□□□□ -0.07
SHROOM1-207ENST00000606676 MAFGO15525 162 aa14.62□□□□□ -0.07
SHROOM1-207ENST00000606676 F2P00734 622 aa14.62□□□□□ -0.07
SHROOM1-207ENST00000606676 ZNF286BP0CG31 522 aa14.62□□□□□ -0.07
SHROOM1-207ENST00000606676 RBM25P49756 843 aaKnown RBP14.62□□□□□ -0.07
SHROOM1-207ENST00000606676 ARHGAP4P98171 946 aa14.62□□□□□ -0.07
SHROOM1-207ENST00000606676 NPY5RQ15761 445 aa14.62□□□□□ -0.07
SHROOM1-207ENST00000606676 CEP55Q53EZ4 464 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms