RNA–Protein interactions for RNA: ENST00000605424.5

MMP28-201, Transcript of matrix metallopeptidase 28, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MMP28, Length 1,928 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-201ENST00000605424 PRR16Q569H4 304 aa22.1■■□□□ 1.13
MMP28-201ENST00000605424 FIGNQ5HY92 759 aa22.1■■□□□ 1.13
MMP28-201ENST00000605424 CCDC65Q8IXS2 484 aa22.1■■□□□ 1.13
MMP28-201ENST00000605424 ERGIC2Q96RQ1 377 aa22.1■■□□□ 1.13
MMP28-201ENST00000605424 P2RX7Q99572 595 aaKnown RBP22.1■■□□□ 1.13
MMP28-201ENST00000605424 TSG101Q99816 390 aa22.1■■□□□ 1.13
MMP28-201ENST00000605424 DESI2Q9BSY9 194 aa22.1■■□□□ 1.13
MMP28-201ENST00000605424 NOC4LQ9BVI4 516 aaKnown RBP22.1■■□□□ 1.13
MMP28-201ENST00000605424 RANBP17Q9H2T7 1088 aaKnown RBP22.1■■□□□ 1.13
MMP28-201ENST00000605424 VEZTQ9HBM0 779 aa22.1■■□□□ 1.13
MMP28-201ENST00000605424 PES1O00541 588 aaKnown RBP22.1■■□□□ 1.13
MMP28-201ENST00000605424 KIF20AO95235 890 aa22.1■■□□□ 1.13
MMP28-201ENST00000605424 PLA2G4BP0C869 781 aa22.1■■□□□ 1.13
MMP28-201ENST00000605424 CAP2P40123 477 aa22.1■■□□□ 1.13
MMP28-201ENST00000605424 SPIRE1Q08AE8 756 aa22.1■■□□□ 1.13
MMP28-201ENST00000605424 FKBP15Q5T1M5 1219 aa22.1■■□□□ 1.13
MMP28-201ENST00000605424 SPICE1Q8N0Z3 855 aa22.1■■□□□ 1.13
MMP28-201ENST00000605424 PDCL2Q8N4E4 241 aa22.1■■□□□ 1.13
MMP28-201ENST00000605424 ACER1Q8TDN7 264 aa22.1■■□□□ 1.13
MMP28-201ENST00000605424 LENG9Q96B70 501 aa22.1■■□□□ 1.13
MMP28-201ENST00000605424 PANK4Q9NVE7 773 aa22.1■■□□□ 1.13
MMP28-201ENST00000605424 CGNQ9P2M7 1197 aaKnown RBP22.1■■□□□ 1.13
MMP28-201ENST00000605424 TTC26A0AVF1 554 aa22.09■■□□□ 1.13
MMP28-201ENST00000605424 B4DLN1 442 aa22.09■■□□□ 1.13
MMP28-201ENST00000605424 RPA1P27694 616 aa22.09■■□□□ 1.13
MMP28-201ENST00000605424 COASYQ13057 564 aa22.09■■□□□ 1.13
MMP28-201ENST00000605424 MYOCDQ8IZQ8 938 aa22.09■■□□□ 1.13
MMP28-201ENST00000605424 HPS3Q969F9 1004 aa22.09■■□□□ 1.13
MMP28-201ENST00000605424 RNF225M0QZC1 329 aaPredicted RBP22.08■■□□□ 1.13
MMP28-201ENST00000605424 ERVK-24P63145 666 aa22.08■■□□□ 1.13
MMP28-201ENST00000605424 CXCL9Q07325 125 aa22.08■■□□□ 1.13
MMP28-201ENST00000605424 MIIPQ5JXC2 388 aa22.08■■□□□ 1.13
MMP28-201ENST00000605424 FAM26FQ5R3K3 315 aa22.08■■□□□ 1.13
MMP28-201ENST00000605424 FAM83BQ5T0W9 1011 aa22.08■■□□□ 1.13
MMP28-201ENST00000605424 GJA10Q969M2 543 aa22.08■■□□□ 1.13
MMP28-201ENST00000605424 MRPL44Q9H9J2 332 aaKnown RBP22.08■■□□□ 1.13
MMP28-201ENST00000605424 PGAP2Q9UHJ9 254 aa22.08■■□□□ 1.13
MMP28-201ENST00000605424 A0A1W2PQJ5 194 aa22.08■■□□□ 1.12
MMP28-201ENST00000605424 ASNSP08243 561 aa22.08■■□□□ 1.12
MMP28-201ENST00000605424 CIAPIN1Q6FI81 312 aa22.08■■□□□ 1.12
MMP28-201ENST00000605424 TTYH3Q9C0H2 523 aa22.08■■□□□ 1.12
MMP28-201ENST00000605424 TMEM39BQ9GZU3 492 aa22.08■■□□□ 1.12
MMP28-201ENST00000605424 EHMT1Q9H9B1 1298 aa22.08■■□□□ 1.12
MMP28-201ENST00000605424 FEM1BQ9UK73 627 aa22.08■■□□□ 1.12
MMP28-201ENST00000605424 MRPL11Q9Y3B7 192 aaKnown RBP22.08■■□□□ 1.12
MMP28-201ENST00000605424 POTEB3A0JP26 581 aa22.07■■□□□ 1.12
MMP28-201ENST00000605424 POTECB2RU33 542 aa22.07■■□□□ 1.12
MMP28-201ENST00000605424 E9PMD0 336 aa22.07■■□□□ 1.12
MMP28-201ENST00000605424 FAM86B1E9PN63 330 aa22.07■■□□□ 1.12
MMP28-201ENST00000605424 FAM86B2P0C5J1 330 aa22.07■■□□□ 1.12
MMP28-201ENST00000605424 BRCA1P38398 1863 aaKnown RBP22.07■■□□□ 1.12
MMP28-201ENST00000605424 KIAA1755Q5JYT7 1200 aa22.07■■□□□ 1.12
MMP28-201ENST00000605424 POTEBQ6S5H4 581 aa22.07■■□□□ 1.12
MMP28-201ENST00000605424 FRMD3A2A2Y4 597 aa22.06■■□□□ 1.12
MMP28-201ENST00000605424 GCOM1H8Y6P7 765 aaPredicted RBP22.06■■□□□ 1.12
MMP28-201ENST00000605424 KIF5CO60282 957 aa22.06■■□□□ 1.12
MMP28-201ENST00000605424 MED24O75448 989 aa22.06■■□□□ 1.12
MMP28-201ENST00000605424 URI1O94763 535 aaPredicted RBP22.06■■□□□ 1.12
MMP28-201ENST00000605424 POLR2MP0CAP2 368 aa22.06■■□□□ 1.12
MMP28-201ENST00000605424 MAN2A1Q16706 1144 aa22.06■■□□□ 1.12
MMP28-201ENST00000605424 SYT17Q9BSW7 474 aa22.06■■□□□ 1.12
MMP28-201ENST00000605424 GINM1Q9NU53 330 aa22.06■■□□□ 1.12
MMP28-201ENST00000605424 MYO1AQ9UBC5 1043 aa22.06■■□□□ 1.12
MMP28-201ENST00000605424 DNM3Q9UQ16 869 aa22.06■■□□□ 1.12
MMP28-201ENST00000605424 WNT10BO00744 389 aa22.06■■□□□ 1.12
MMP28-201ENST00000605424 CYP11B2P19099 503 aa22.06■■□□□ 1.12
MMP28-201ENST00000605424 TRIM21P19474 475 aaKnown RBP22.06■■□□□ 1.12
MMP28-201ENST00000605424 ZNF76P36508 570 aa22.06■■□□□ 1.12
MMP28-201ENST00000605424 SLC12A3P55017 1021 aa22.06■■□□□ 1.12
MMP28-201ENST00000605424 ZBED6P86452 979 aa22.06■■□□□ 1.12
MMP28-201ENST00000605424 TNIP1Q15025 636 aa22.06■■□□□ 1.12
MMP28-201ENST00000605424 MEA1Q16626 185 aa22.06■■□□□ 1.12
MMP28-201ENST00000605424 VWA3BQ502W6 1294 aa22.06■■□□□ 1.12
MMP28-201ENST00000605424 GPBP1Q86WP2 473 aa22.06■■□□□ 1.12
MMP28-201ENST00000605424 CATSPER3Q86XQ3 398 aa22.06■■□□□ 1.12
MMP28-201ENST00000605424 ZNF397Q8NF99 534 aaPredicted RBP22.06■■□□□ 1.12
MMP28-201ENST00000605424 KIFC2Q96AC6 838 aa22.06■■□□□ 1.12
MMP28-201ENST00000605424 FANCGO15287 622 aa22.05■■□□□ 1.12
MMP28-201ENST00000605424 MSH4O15457 936 aa22.05■■□□□ 1.12
MMP28-201ENST00000605424 SSBP05455 408 aaKnown RBP eCLIP22.05■■□□□ 1.12
MMP28-201ENST00000605424 MAP3K9P80192 1104 aa22.05■■□□□ 1.12
MMP28-201ENST00000605424 TUBB2AQ13885 445 aa22.05■■□□□ 1.12
MMP28-201ENST00000605424 CCDC84Q86UT8 332 aaPredicted RBP22.05■■□□□ 1.12
MMP28-201ENST00000605424 JDP2Q8WYK2 163 aa22.05■■□□□ 1.12
MMP28-201ENST00000605424 WDR24Q96S15 920 aa22.05■■□□□ 1.12
MMP28-201ENST00000605424 POLR3CQ9BUI4 534 aaPredicted RBP22.05■■□□□ 1.12
MMP28-201ENST00000605424 TUBB2BQ9BVA1 445 aa22.05■■□□□ 1.12
MMP28-201ENST00000605424 DEFB129Q9H1M3 183 aa22.05■■□□□ 1.12
MMP28-201ENST00000605424 MYOZ2Q9NPC6 264 aa22.05■■□□□ 1.12
MMP28-201ENST00000605424 EPN1Q9Y6I3 576 aaPredicted RBP22.05■■□□□ 1.12
MMP28-201ENST00000605424 HOXA13P31271 388 aaPredicted RBP22.04■■□□□ 1.12
MMP28-201ENST00000605424 STAT3P40763 770 aa22.04■■□□□ 1.12
MMP28-201ENST00000605424 FKBP3Q00688 224 aaKnown RBP22.04■■□□□ 1.12
MMP28-201ENST00000605424 KIF4BQ2VIQ3 1234 aa22.04■■□□□ 1.12
MMP28-201ENST00000605424 ZCWPW2Q504Y3 356 aa22.04■■□□□ 1.12
MMP28-201ENST00000605424 DALRD3Q5D0E6 543 aaKnown RBP22.04■■□□□ 1.12
MMP28-201ENST00000605424 LRRC55Q6ZSA7 311 aa22.04■■□□□ 1.12
MMP28-201ENST00000605424 SYT2Q8N9I0 419 aaPredicted RBP22.04■■□□□ 1.12
MMP28-201ENST00000605424 CEP63Q96MT8 703 aa22.04■■□□□ 1.12
MMP28-201ENST00000605424 TAOK3Q9H2K8 898 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms