RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 CEP19Q96LK0 163 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 STK17AQ9UEE5 414 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 H3BRJ5 948 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 NCF2P19878 526 aaPredicted RBP10.38□□□□□ -0.75
CSMD1-217ENST00000602723 PMLP29590 882 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 ADD1P35611 737 aaKnown RBP10.38□□□□□ -0.75
CSMD1-217ENST00000602723 DR1Q01658 176 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 TRIM59Q8IWR1 403 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 SMYD4Q8IYR2 804 aaPredicted RBP10.38□□□□□ -0.75
CSMD1-217ENST00000602723 FBXO18Q8NFZ0 1043 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 NEK9Q8TD19 979 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 KRT1P04264 644 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 PNMA6AP0CW24 399 aaPredicted RBP10.38□□□□□ -0.75
CSMD1-217ENST00000602723 ATG16L1Q676U5 607 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 SHROOM2Q13796 1616 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 MYH7P12883 1935 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 GSPT1P15170 499 aaKnown RBP10.38□□□□□ -0.75
CSMD1-217ENST00000602723 MCF2L2Q86YR7 1114 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 CEP70Q8NHQ1 597 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 KIFC3Q9BVG8 833 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 SPDYE2BA6NHP3 402 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 BTBD18B2RXH4 712 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 LMNAP02545 664 aaKnown RBP10.38□□□□□ -0.75
CSMD1-217ENST00000602723 GCP02774 474 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 SPDYE6P0CI01 402 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 EIF3BP55884 814 aaKnown RBP10.38□□□□□ -0.75
CSMD1-217ENST00000602723 DYNLT1P63172 113 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 C11orf57Q6ZUT1 292 aaPredicted RBP10.38□□□□□ -0.75
CSMD1-217ENST00000602723 POLR3CQ9BUI4 534 aaPredicted RBP10.38□□□□□ -0.75
CSMD1-217ENST00000602723 RNF14Q9UBS8 474 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 WDR91A4D1P6 747 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 SPAG7O75391 227 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 SLC4A1P02730 911 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 PTPREP23469 700 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 PCGF5Q86SE9 256 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 LRRC47Q8N1G4 583 aaKnown RBP10.38□□□□□ -0.75
CSMD1-217ENST00000602723 PANX2Q96RD6 677 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 SPC25Q9HBM1 224 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 SLC38A10Q9HBR0 1119 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 NOP53Q9NZM5 478 aaKnown RBP10.38□□□□□ -0.75
CSMD1-217ENST00000602723 HSPA6P17066 643 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 IL13P35225 146 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 TEKT2Q9UIF3 430 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 PCDHA1Q9Y5I3 950 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 LARP4BQ92615 738 aaKnown RBP10.38□□□□□ -0.75
CSMD1-217ENST00000602723 SLC5A4Q9NY91 659 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 PTPRKQ15262 1439 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 USP17L12C9JPN9 530 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 USP17L21D6R901 530 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 CFLARO15519 480 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 AFPP02771 609 aaKnown RBP10.38□□□□□ -0.75
CSMD1-217ENST00000602723 GRAMD4Q6IC98 578 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 USP40Q9NVE5 1235 aa10.38□□□□□ -0.75
CSMD1-217ENST00000602723 IKBKBO14920 756 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 GAP43P17677 238 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 CYP4A11Q02928 519 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 MMS22LQ6ZRQ5 1243 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 DEPDC1BQ8WUY9 529 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 DYDC2Q96IM9 177 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 FOXP1Q9H334 677 aaPredicted RBP10.37□□□□□ -0.75
CSMD1-217ENST00000602723 ATP10DQ9P241 1426 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 TMEM259Q4ZIN3 620 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 FBXL13Q8NEE6 735 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 SEPT8Q92599 483 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 FIS1Q9Y3D6 152 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 MOCS3O95396 460 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 MCF2P10911 925 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 ADCY2Q08462 1091 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 POLA2Q14181 598 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 C6orf118Q5T5N4 469 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 PPP1R2P3Q6NXS1 205 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 DARS2Q6PI48 645 aaKnown RBP10.37□□□□□ -0.75
CSMD1-217ENST00000602723 RSRC2Q7L4I2 434 aaKnown RBP10.37□□□□□ -0.75
CSMD1-217ENST00000602723 NIM1KQ8IY84 436 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 PARD6BQ9BYG5 372 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 NBPF3Q9H094 633 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 IFNL3Q8IZI9 196 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 SUCLA2Q9P2R7 463 aaPredicted RBP10.37□□□□□ -0.75
CSMD1-217ENST00000602723 RWDD2AQ9UIY3 292 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 MYO18AQ92614 2054 aaKnown RBP10.37□□□□□ -0.75
CSMD1-217ENST00000602723 CREB3O43889 395 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 BASP1P80723 227 aaKnown RBP10.37□□□□□ -0.75
CSMD1-217ENST00000602723 SDR42E1Q8WUS8 393 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 TEKT3Q9BXF9 490 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 TLK1Q9UKI8 766 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 DCTN3O75935 186 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 GFPT2O94808 682 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 TRAPPC10P48553 1259 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 CASP8Q14790 479 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 MAN2A1Q16706 1144 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 DNAJC24Q6P3W2 148 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 MLXIPQ9HAP2 919 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 ALAS1P13196 640 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 CRLF3Q8IUI8 442 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 FAM133AQ8N9E0 248 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 EDC3Q96F86 508 aaKnown RBP10.37□□□□□ -0.75
CSMD1-217ENST00000602723 FAM81BQ96LP2 452 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 ATP6V1E1P36543 226 aa10.37□□□□□ -0.75
CSMD1-217ENST00000602723 TRIP13Q15645 432 aaPredicted RBP10.37□□□□□ -0.75
CSMD1-217ENST00000602723 CACTINQ8WUQ7 758 aaKnown RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms