RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 KIAA1257Q9ULG3 409 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 ABCC1P33527 1531 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 PTCH1Q13635 1447 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 A0A0B4J203 849 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 H0YC42 278 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 GNA14O95837 355 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 APOEP02649 317 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 GLI1P08151 1106 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 GNAZP19086 355 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 CALB2P22676 271 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 TKTP29401 623 aaKnown RBP9.67□□□□□ -0.86
COMMD3-215ENST00000602574 MDH1P40925 334 aaKnown RBP9.67□□□□□ -0.86
COMMD3-215ENST00000602574 ADARP55265 1226 aaKnown RBP9.67□□□□□ -0.86
COMMD3-215ENST00000602574 TPD52P55327 224 aaPredicted RBP9.67□□□□□ -0.86
COMMD3-215ENST00000602574 MAP3K12Q12852 859 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 KIF22Q14807 665 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 NDUFAF5Q5TEU4 345 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 FIP1L1Q6UN15 594 aaKnown RBP9.67□□□□□ -0.86
COMMD3-215ENST00000602574 BRSK2Q8IWQ3 736 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 CCDC82Q8N4S0 544 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 SYTL4Q96C24 671 aaPredicted RBP9.67□□□□□ -0.86
COMMD3-215ENST00000602574 ASIC4Q96FT7 647 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 C1orf74Q96LT6 269 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 OLFM3Q96PB7 478 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 CDCA7Q9BWT1 371 aaPredicted RBP9.67□□□□□ -0.86
COMMD3-215ENST00000602574 KLHL4Q9C0H6 718 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 SCAND2PQ9GZW5 306 aaPredicted RBP9.67□□□□□ -0.86
COMMD3-215ENST00000602574 C12orf10Q9HB07 376 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.67□□□□□ -0.86
COMMD3-215ENST00000602574 IP6K2Q9UHH9 426 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 TSC22D4Q9Y3Q8 395 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 HEY1Q9Y5J3 304 aa9.67□□□□□ -0.86
COMMD3-215ENST00000602574 STX10O60499 249 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 DGKIO75912 1065 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 PCP11498 1178 aaKnown RBP9.66□□□□□ -0.86
COMMD3-215ENST00000602574 GSPT1P15170 499 aaKnown RBP9.66□□□□□ -0.86
COMMD3-215ENST00000602574 RFC5P40937 340 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 SARSP49591 514 aaKnown RBP9.66□□□□□ -0.86
COMMD3-215ENST00000602574 GJA9P57773 515 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 ATP8B2P98198 1209 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 PROSER3Q2NL68 480 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 ANKDD1AQ495B1 522 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 C10orf76Q5T2E6 689 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 KRT27Q7Z3Y8 459 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 OSTM1Q86WC4 334 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 RHOT2Q8IXI1 618 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 SGCDQ92629 289 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 ZNF75CPQ92670 426 aaPredicted RBP9.66□□□□□ -0.86
COMMD3-215ENST00000602574 ANKRD36BP1Q96IX9 119 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 COG3Q96JB2 828 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 SELENOOQ9BVL4 669 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 DACT1Q9NYF0 836 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 DLGAP2Q9P1A6 1054 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 GPC6Q9Y625 555 aaPredicted RBP9.66□□□□□ -0.86
COMMD3-215ENST00000602574 ZNF536O15090 1300 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 ITIH6Q6UXX5 1313 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.66□□□□□ -0.86
COMMD3-215ENST00000602574 E9PMD0 336 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 HAT1O14929 419 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 ASMTLO95671 621 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 PAEPP09466 180 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 POTEJP0CG39 1038 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 MAN1A1P33908 653 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 PCK1P35558 622 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 HNRNPMP52272 730 aaKnown RBP eCLIP9.66□□□□□ -0.86
COMMD3-215ENST00000602574 GSTA3Q16772 222 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 KCTD16Q68DU8 428 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 SIGIRRQ6IA17 410 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 VPS36Q86VN1 386 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 TMEM139Q8IV31 216 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 CD302Q8IX05 232 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 CKAP2LQ8IYA6 745 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 SPICE1Q8N0Z3 855 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 ZFPM2Q8WW38 1151 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 RIN2Q8WYP3 895 aaPredicted RBP9.66□□□□□ -0.86
COMMD3-215ENST00000602574 STARD8Q92502 1023 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 VTI1AQ96AJ9 217 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 EFHD2Q96C19 240 aaPredicted RBP9.66□□□□□ -0.86
COMMD3-215ENST00000602574 FHDC1Q9C0D6 1143 aaPredicted RBP9.66□□□□□ -0.86
COMMD3-215ENST00000602574 NDEL1Q9GZM8 345 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 TIMMDC1Q9NPL8 285 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 TTF2Q9UNY4 1162 aaKnown RBP9.66□□□□□ -0.86
COMMD3-215ENST00000602574 NFE2L3Q9Y4A8 694 aa9.66□□□□□ -0.86
COMMD3-215ENST00000602574 ARIH1Q9Y4X5 557 aaPredicted RBP9.66□□□□□ -0.86
COMMD3-215ENST00000602574 FRMPD1Q5SYB0 1578 aa9.65□□□□□ -0.86
COMMD3-215ENST00000602574 VPS37CA5D8V6 355 aaPredicted RBP9.65□□□□□ -0.86
COMMD3-215ENST00000602574 GOLGA8CPA6NN73 597 aa9.65□□□□□ -0.86
COMMD3-215ENST00000602574 FAM47E-STBD1D6RA91 191 aa9.65□□□□□ -0.86
COMMD3-215ENST00000602574 M0QX08 132 aa9.65□□□□□ -0.86
COMMD3-215ENST00000602574 RHOXF2BP0C7M4 288 aa9.65□□□□□ -0.86
COMMD3-215ENST00000602574 GBP1P32455 592 aa9.65□□□□□ -0.86
COMMD3-215ENST00000602574 TBL3Q12788 808 aaKnown RBP9.65□□□□□ -0.86
COMMD3-215ENST00000602574 NNTQ13423 1086 aa9.65□□□□□ -0.86
COMMD3-215ENST00000602574 SPRED3Q2MJR0 410 aa9.65□□□□□ -0.86
COMMD3-215ENST00000602574 SLC27A3Q5K4L6 730 aa9.65□□□□□ -0.86
COMMD3-215ENST00000602574 EFCAB2Q5VUJ9 269 aa9.65□□□□□ -0.86
COMMD3-215ENST00000602574 BEND5Q7L4P6 421 aa9.65□□□□□ -0.86
COMMD3-215ENST00000602574 RELL1Q8IUW5 271 aa9.65□□□□□ -0.86
COMMD3-215ENST00000602574 CARNMT1Q8N4J0 409 aa9.65□□□□□ -0.86
COMMD3-215ENST00000602574 TOR1AIP2Q8NFQ8 470 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms