RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 SEZ6LQ9BYH1 1024 aa19.17■□□□□ 0.66
SSBP4-213ENST00000602088 SLKQ9H2G2 1235 aaPredicted RBP19.17■□□□□ 0.66
SSBP4-213ENST00000602088 PCDH10Q9P2E7 1040 aa19.17■□□□□ 0.66
SSBP4-213ENST00000602088 MROH7Q68CQ1 1323 aa19.17■□□□□ 0.66
SSBP4-213ENST00000602088 MYH7BA7E2Y1 1941 aa19.17■□□□□ 0.66
SSBP4-213ENST00000602088 TRIM43BA6NCK2 446 aa19.16■□□□□ 0.66
SSBP4-213ENST00000602088 FIBPO43427 364 aa19.16■□□□□ 0.66
SSBP4-213ENST00000602088 GGPS1O95749 300 aa19.16■□□□□ 0.66
SSBP4-213ENST00000602088 MMP3P08254 477 aa19.16■□□□□ 0.66
SSBP4-213ENST00000602088 UBA1P22314 1058 aaKnown RBP19.16■□□□□ 0.66
SSBP4-213ENST00000602088 PSMC6P62333 389 aa19.16■□□□□ 0.66
SSBP4-213ENST00000602088 SCRN1Q12765 414 aa19.16■□□□□ 0.66
SSBP4-213ENST00000602088 SEMA3FQ13275 785 aa19.16■□□□□ 0.66
SSBP4-213ENST00000602088 TRIM43Q96BQ3 446 aaPredicted RBP19.16■□□□□ 0.66
SSBP4-213ENST00000602088 ANO3Q9BYT9 981 aa19.16■□□□□ 0.66
SSBP4-213ENST00000602088 EHMT1Q9H9B1 1298 aa19.16■□□□□ 0.66
SSBP4-213ENST00000602088 C6orf50Q9HD87 102 aa19.16■□□□□ 0.66
SSBP4-213ENST00000602088 PRDM5Q9NQX1 630 aaPredicted RBP19.16■□□□□ 0.66
SSBP4-213ENST00000602088 SH3GLB2Q9NR46 395 aa19.16■□□□□ 0.66
SSBP4-213ENST00000602088 TMEM260Q9NX78 707 aa19.16■□□□□ 0.66
SSBP4-213ENST00000602088 DEXIO95424 95 aa19.15■□□□□ 0.66
SSBP4-213ENST00000602088 BMP8BP34820 402 aa19.15■□□□□ 0.66
SSBP4-213ENST00000602088 AP3B2Q13367 1082 aa19.15■□□□□ 0.66
SSBP4-213ENST00000602088 NLRX1Q86UT6 975 aa19.15■□□□□ 0.66
SSBP4-213ENST00000602088 FAM126BQ8IXS8 530 aa19.15■□□□□ 0.66
SSBP4-213ENST00000602088 PPTC7Q8NI37 304 aa19.15■□□□□ 0.66
SSBP4-213ENST00000602088 GPRASP2Q96D09 838 aa19.15■□□□□ 0.66
SSBP4-213ENST00000602088 PGBD1Q96JS3 809 aa19.15■□□□□ 0.66
SSBP4-213ENST00000602088 UBIAD1Q9Y5Z9 338 aa19.15■□□□□ 0.66
SSBP4-213ENST00000602088 SCN10AQ9Y5Y9 1956 aa19.14■□□□□ 0.65
SSBP4-213ENST00000602088 KIAA0355O15063 1070 aa19.14■□□□□ 0.65
SSBP4-213ENST00000602088 ADAMTS3O15072 1205 aa19.14■□□□□ 0.65
SSBP4-213ENST00000602088 ITGB5P18084 799 aa19.14■□□□□ 0.65
SSBP4-213ENST00000602088 GNA11P29992 359 aa19.14■□□□□ 0.65
SSBP4-213ENST00000602088 NEDD9Q14511 834 aa19.14■□□□□ 0.65
SSBP4-213ENST00000602088 DGKDQ16760 1214 aa19.14■□□□□ 0.65
SSBP4-213ENST00000602088 HSDL1Q3SXM5 330 aa19.14■□□□□ 0.65
SSBP4-213ENST00000602088 MCTP2Q6DN12 878 aa19.14■□□□□ 0.65
SSBP4-213ENST00000602088 SPATA33Q96N06 139 aa19.14■□□□□ 0.65
SSBP4-213ENST00000602088 KIF2CQ99661 725 aa19.14■□□□□ 0.65
SSBP4-213ENST00000602088 SENP7Q9BQF6 1050 aa19.14■□□□□ 0.65
SSBP4-213ENST00000602088 C22orf23Q9BZE7 217 aa19.14■□□□□ 0.65
SSBP4-213ENST00000602088 BCAS3Q9H6U6 928 aa19.14■□□□□ 0.65
SSBP4-213ENST00000602088 MLXIPQ9HAP2 919 aa19.14■□□□□ 0.65
SSBP4-213ENST00000602088 TMEM39AQ9NV64 488 aa19.14■□□□□ 0.65
SSBP4-213ENST00000602088 VPS54Q9P1Q0 977 aa19.14■□□□□ 0.65
SSBP4-213ENST00000602088 TRIOBPQ9H2D6 2365 aa19.13■□□□□ 0.65
SSBP4-213ENST00000602088 TLR3O15455 904 aaKnown RBP19.13■□□□□ 0.65
SSBP4-213ENST00000602088 SORBS3O60504 671 aa19.13■□□□□ 0.65
SSBP4-213ENST00000602088 PPFIA4O75335 1185 aa19.13■□□□□ 0.65
SSBP4-213ENST00000602088 CDKL5O76039 1030 aa19.13■□□□□ 0.65
SSBP4-213ENST00000602088 CD4P01730 458 aa19.13■□□□□ 0.65
SSBP4-213ENST00000602088 HOXD8P13378 290 aaPredicted RBP19.13■□□□□ 0.65
SSBP4-213ENST00000602088 SREBF1P36956 1147 aa19.13■□□□□ 0.65
SSBP4-213ENST00000602088 MDM2Q00987 491 aaPredicted RBP19.13■□□□□ 0.65
SSBP4-213ENST00000602088 ME3Q16798 604 aa19.13■□□□□ 0.65
SSBP4-213ENST00000602088 NBPF20Q3BBV1 942 aa19.13■□□□□ 0.65
SSBP4-213ENST00000602088 HABP4Q5JVS0 413 aaKnown RBP19.13■□□□□ 0.65
SSBP4-213ENST00000602088 JAKMIP3Q5VZ66 844 aa19.13■□□□□ 0.65
SSBP4-213ENST00000602088 CCDC148Q8NFR7 591 aa19.13■□□□□ 0.65
SSBP4-213ENST00000602088 CDHR1Q96JP9 859 aa19.13■□□□□ 0.65
SSBP4-213ENST00000602088 LBHD1Q9BQE6 289 aaPredicted RBP19.13■□□□□ 0.65
SSBP4-213ENST00000602088 JADE2Q9NQC1 790 aa19.13■□□□□ 0.65
SSBP4-213ENST00000602088 MAFGO15525 162 aa19.12■□□□□ 0.65
SSBP4-213ENST00000602088 LARGE1O95461 756 aa19.12■□□□□ 0.65
SSBP4-213ENST00000602088 CTDNEP1O95476 244 aa19.12■□□□□ 0.65
SSBP4-213ENST00000602088 ITGB8P26012 769 aa19.12■□□□□ 0.65
SSBP4-213ENST00000602088 RBM25P49756 843 aaKnown RBP19.12■□□□□ 0.65
SSBP4-213ENST00000602088 METTL7BQ6UX53 244 aa19.12■□□□□ 0.65
SSBP4-213ENST00000602088 CYFIP1Q7L576 1253 aa19.12■□□□□ 0.65
SSBP4-213ENST00000602088 REXO1Q8N1G1 1221 aaKnown RBP19.12■□□□□ 0.65
SSBP4-213ENST00000602088 BICD2Q8TD16 824 aa19.12■□□□□ 0.65
SSBP4-213ENST00000602088 KAT2BQ92831 832 aa19.12■□□□□ 0.65
SSBP4-213ENST00000602088 MXRA8Q9BRK3 442 aa19.12■□□□□ 0.65
SSBP4-213ENST00000602088 TBX21Q9UL17 535 aa19.12■□□□□ 0.65
SSBP4-213ENST00000602088 LTBP2Q14767 1821 aa19.11■□□□□ 0.65
SSBP4-213ENST00000602088 ATP9AO75110 1047 aa19.11■□□□□ 0.65
SSBP4-213ENST00000602088 RAG1P15918 1043 aa19.11■□□□□ 0.65
SSBP4-213ENST00000602088 MTMR1Q13613 665 aa19.11■□□□□ 0.65
SSBP4-213ENST00000602088 FAM177A1Q8N128 213 aaPredicted RBP19.11■□□□□ 0.65
SSBP4-213ENST00000602088 NECAB1Q8N987 351 aa19.11■□□□□ 0.65
SSBP4-213ENST00000602088 GIMAP8Q8ND71 665 aaPredicted RBP19.11■□□□□ 0.65
SSBP4-213ENST00000602088 CRYGNQ8WXF5 182 aa19.11■□□□□ 0.65
SSBP4-213ENST00000602088 BADQ92934 168 aa19.11■□□□□ 0.65
SSBP4-213ENST00000602088 GTF3C6Q969F1 213 aa19.11■□□□□ 0.65
SSBP4-213ENST00000602088 TRPV6Q9H1D0 765 aa19.11■□□□□ 0.65
SSBP4-213ENST00000602088 STK36Q9NRP7 1315 aa19.1■□□□□ 0.65
SSBP4-213ENST00000602088 A0A1W2PPC1 479 aa19.1■□□□□ 0.65
SSBP4-213ENST00000602088 B4GALT4O60513 344 aa19.1■□□□□ 0.65
SSBP4-213ENST00000602088 KCNA2P16389 499 aa19.1■□□□□ 0.65
SSBP4-213ENST00000602088 NLRP5P59047 1200 aa19.1■□□□□ 0.65
SSBP4-213ENST00000602088 ARHGAP4P98171 946 aa19.1■□□□□ 0.65
SSBP4-213ENST00000602088 PTPN11Q06124 597 aaPredicted RBP19.1■□□□□ 0.65
SSBP4-213ENST00000602088 CEP55Q53EZ4 464 aa19.1■□□□□ 0.65
SSBP4-213ENST00000602088 NFRKBQ6P4R8 1299 aa19.1■□□□□ 0.65
SSBP4-213ENST00000602088 CYP2W1Q8TAV3 490 aa19.1■□□□□ 0.65
SSBP4-213ENST00000602088 AIFM3Q96NN9 605 aa19.1■□□□□ 0.65
SSBP4-213ENST00000602088 UBE2OQ9C0C9 1292 aaKnown RBP19.1■□□□□ 0.65
SSBP4-213ENST00000602088 DOCK5Q9H7D0 1870 aa19.09■□□□□ 0.65
SSBP4-213ENST00000602088 MEIS1O00470 390 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms