RNA–Protein interactions for RNA: ENST00000601324.1

VRK3-222, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-222ENST00000601324 POMZP3Q6PJE2 187 aa6.22□□□□□ -1.41
VRK3-222ENST00000601324 TOM1L2Q6ZVM7 507 aa6.22□□□□□ -1.41
VRK3-222ENST00000601324 ZNF227Q86WZ6 799 aa6.22□□□□□ -1.41
VRK3-222ENST00000601324 CRACR2BQ8N4Y2 399 aaPredicted RBP6.22□□□□□ -1.41
VRK3-222ENST00000601324 BVESQ8NE79 360 aa6.22□□□□□ -1.41
VRK3-222ENST00000601324 PPP1R14AQ96A00 147 aa6.22□□□□□ -1.41
VRK3-222ENST00000601324 TCTN2Q96GX1 697 aa6.22□□□□□ -1.41
VRK3-222ENST00000601324 SGSM3Q96HU1 749 aa6.22□□□□□ -1.41
VRK3-222ENST00000601324 LRP2BPQ9P2M1 347 aa6.22□□□□□ -1.41
VRK3-222ENST00000601324 ZMYM5Q9UJ78 669 aa6.22□□□□□ -1.41
VRK3-222ENST00000601324 EMC9Q9Y3B6 208 aa6.22□□□□□ -1.41
VRK3-222ENST00000601324 CPSF1Q10570 1443 aaKnown RBP6.22□□□□□ -1.41
VRK3-222ENST00000601324 NSD2O96028 1365 aa6.21□□□□□ -1.41
VRK3-222ENST00000601324 QRICH2Q9H0J4 1663 aa6.21□□□□□ -1.42
VRK3-222ENST00000601324 H0Y8X5 98 aa6.21□□□□□ -1.42
VRK3-222ENST00000601324 EXOC5O00471 708 aa6.21□□□□□ -1.42
VRK3-222ENST00000601324 NOP56O00567 594 aaKnown RBP6.21□□□□□ -1.42
VRK3-222ENST00000601324 BMP8BP34820 402 aa6.21□□□□□ -1.42
VRK3-222ENST00000601324 PCBP3P57721 371 aaKnown RBP6.21□□□□□ -1.42
VRK3-222ENST00000601324 BNIP3Q12983 259 aa6.21□□□□□ -1.42
VRK3-222ENST00000601324 GRB10Q13322 594 aa6.21□□□□□ -1.42
VRK3-222ENST00000601324 IKZF1Q13422 519 aa6.21□□□□□ -1.42
VRK3-222ENST00000601324 PPP2R5DQ14738 602 aa6.21□□□□□ -1.42
VRK3-222ENST00000601324 ZMYM1Q5SVZ6 1142 aa6.21□□□□□ -1.42
VRK3-222ENST00000601324 CWF19L1Q69YN2 538 aaKnown RBP6.21□□□□□ -1.42
VRK3-222ENST00000601324 CRTC3Q6UUV7 619 aa6.21□□□□□ -1.42
VRK3-222ENST00000601324 SPATC1Q76KD6 591 aa6.21□□□□□ -1.42
VRK3-222ENST00000601324 NOP9Q86U38 636 aaKnown RBP6.21□□□□□ -1.42
VRK3-222ENST00000601324 COL23A1Q86Y22 540 aaPredicted RBP6.21□□□□□ -1.42
VRK3-222ENST00000601324 CREG2Q8IUH2 290 aa6.21□□□□□ -1.42
VRK3-222ENST00000601324 TRIM59Q8IWR1 403 aa6.21□□□□□ -1.42
VRK3-222ENST00000601324 LRRC47Q8N1G4 583 aaKnown RBP6.21□□□□□ -1.42
VRK3-222ENST00000601324 LRRN4CLQ8ND94 238 aa6.21□□□□□ -1.42
VRK3-222ENST00000601324 MRGPRX3Q96LB0 322 aa6.21□□□□□ -1.42
VRK3-222ENST00000601324 ZDHHC15Q96MV8 337 aa6.21□□□□□ -1.42
VRK3-222ENST00000601324 DNAJC7Q99615 494 aa6.21□□□□□ -1.42
VRK3-222ENST00000601324 CDK19Q9BWU1 502 aa6.21□□□□□ -1.42
VRK3-222ENST00000601324 CCDC39Q9UFE4 941 aa6.21□□□□□ -1.42
VRK3-222ENST00000601324 AKT3Q9Y243 479 aa6.21□□□□□ -1.42
VRK3-222ENST00000601324 PPIP5K1Q6PFW1 1433 aa6.21□□□□□ -1.42
VRK3-222ENST00000601324 ESR1P03372 595 aa6.2□□□□□ -1.42
VRK3-222ENST00000601324 ITGAVP06756 1048 aa6.2□□□□□ -1.42
VRK3-222ENST00000601324 CD96P40200 585 aa6.2□□□□□ -1.42
VRK3-222ENST00000601324 POU4F1Q01851 419 aa6.2□□□□□ -1.42
VRK3-222ENST00000601324 SSRP1Q08945 709 aaKnown RBP6.2□□□□□ -1.42
VRK3-222ENST00000601324 LRP8Q14114 963 aa6.2□□□□□ -1.42
VRK3-222ENST00000601324 ANGEL2Q5VTE6 544 aaKnown RBP6.2□□□□□ -1.42
VRK3-222ENST00000601324 RNF111Q6ZNA4 994 aa6.2□□□□□ -1.42
VRK3-222ENST00000601324 SPRED2Q7Z698 418 aa6.2□□□□□ -1.42
VRK3-222ENST00000601324 WFDC3Q8IUB2 231 aa6.2□□□□□ -1.42
VRK3-222ENST00000601324 USHBP1Q8N6Y0 703 aa6.2□□□□□ -1.42
VRK3-222ENST00000601324 LINC00116Q8NCU8 138 aa6.2□□□□□ -1.42
VRK3-222ENST00000601324 NMRK2Q9NPI5 230 aa6.2□□□□□ -1.42
VRK3-222ENST00000601324 PCMTD2Q9NV79 361 aa6.2□□□□□ -1.42
VRK3-222ENST00000601324 ANGEL1Q9UNK9 670 aaKnown RBP6.2□□□□□ -1.42
VRK3-222ENST00000601324 PCDHA11Q9Y5I1 949 aa6.2□□□□□ -1.42
VRK3-222ENST00000601324 NFAT5O94916 1531 aa6.2□□□□□ -1.42
VRK3-222ENST00000601324 CCDC7Q96M83 1385 aa6.19□□□□□ -1.42
VRK3-222ENST00000601324 A0A1W2PQU0 124 aa6.19□□□□□ -1.42
VRK3-222ENST00000601324 SYPP08247 313 aa6.19□□□□□ -1.42
VRK3-222ENST00000601324 CD8BP10966 210 aa6.19□□□□□ -1.42
VRK3-222ENST00000601324 ZNF574Q6ZN55 896 aaPredicted RBP6.19□□□□□ -1.42
VRK3-222ENST00000601324 FLCNQ8NFG4 579 aa6.19□□□□□ -1.42
VRK3-222ENST00000601324 MPHOSPH9Q99550 1183 aa6.19□□□□□ -1.42
VRK3-222ENST00000601324 SPATA9Q9BWV2 254 aa6.19□□□□□ -1.42
VRK3-222ENST00000601324 LGR4Q9BXB1 951 aa6.19□□□□□ -1.42
VRK3-222ENST00000601324 FOXP3Q9BZS1 431 aa6.19□□□□□ -1.42
VRK3-222ENST00000601324 LMCD1Q9NZU5 365 aa6.19□□□□□ -1.42
VRK3-222ENST00000601324 PFDN2Q9UHV9 154 aa6.19□□□□□ -1.42
VRK3-222ENST00000601324 TCFL5Q9UL49 500 aa6.19□□□□□ -1.42
VRK3-222ENST00000601324 PIK3C2AO00443 1686 aa6.19□□□□□ -1.42
VRK3-222ENST00000601324 LY75O60449 1722 aa6.19□□□□□ -1.42
VRK3-222ENST00000601324 C10orf71Q711Q0 1435 aa6.18□□□□□ -1.42
VRK3-222ENST00000601324 SSU72P8A0A1W2PR75 194 aa6.18□□□□□ -1.42
VRK3-222ENST00000601324 TBX1O43435 398 aa6.18□□□□□ -1.42
VRK3-222ENST00000601324 DIAPH1O60610 1272 aaKnown RBP6.18□□□□□ -1.42
VRK3-222ENST00000601324 ZNF205O95201 554 aa6.18□□□□□ -1.42
VRK3-222ENST00000601324 KCNH1O95259 989 aa6.18□□□□□ -1.42
VRK3-222ENST00000601324 CAPNS1P04632 268 aa6.18□□□□□ -1.42
VRK3-222ENST00000601324 CD3EP07766 207 aa6.18□□□□□ -1.42
VRK3-222ENST00000601324 VAV1P15498 845 aa6.18□□□□□ -1.42
VRK3-222ENST00000601324 ENDOUP21128 410 aaKnown RBP6.18□□□□□ -1.42
VRK3-222ENST00000601324 PPP2R2AP63151 447 aa6.18□□□□□ -1.42
VRK3-222ENST00000601324 AMPD2Q01433 879 aa6.18□□□□□ -1.42
VRK3-222ENST00000601324 EGR3Q06889 387 aa6.18□□□□□ -1.42
VRK3-222ENST00000601324 NFXL1Q6ZNB6 911 aa6.18□□□□□ -1.42
VRK3-222ENST00000601324 AMIGO3Q86WK7 504 aa6.18□□□□□ -1.42
VRK3-222ENST00000601324 CARS2Q9HA77 564 aaKnown RBP6.18□□□□□ -1.42
VRK3-222ENST00000601324 TFCP2L1Q9NZI6 479 aa6.18□□□□□ -1.42
VRK3-222ENST00000601324 KDM2BQ8NHM5 1336 aa6.18□□□□□ -1.42
VRK3-222ENST00000601324 RGPD5Q99666 1765 aa6.18□□□□□ -1.42
VRK3-222ENST00000601324 KIAA1551Q9HCM1 1747 aa6.17□□□□□ -1.42
VRK3-222ENST00000601324 HYAL3O43820 417 aaPredicted RBP6.17□□□□□ -1.42
VRK3-222ENST00000601324 WNT11O96014 354 aa6.17□□□□□ -1.42
VRK3-222ENST00000601324 HSPA1AP0DMV8 641 aaKnown RBP6.17□□□□□ -1.42
VRK3-222ENST00000601324 HSPA1BP0DMV9 641 aaKnown RBP6.17□□□□□ -1.42
VRK3-222ENST00000601324 NOP2P46087 812 aaKnown RBP6.17□□□□□ -1.42
VRK3-222ENST00000601324 TEKQ02763 1124 aa6.17□□□□□ -1.42
VRK3-222ENST00000601324 ZP2Q05996 745 aa6.17□□□□□ -1.42
VRK3-222ENST00000601324 FSTL1Q12841 308 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms