RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 ANKRD33Q7Z3H0 272 aa18.57■□□□□ 0.56
LSM4-206ENST00000600289 CCDC12Q8WUD4 166 aaPredicted RBP18.57■□□□□ 0.56
LSM4-206ENST00000600289 TOX2Q96NM4 488 aa18.57■□□□□ 0.56
LSM4-206ENST00000600289 INPP4AQ96PE3 977 aaPredicted RBP18.57■□□□□ 0.56
LSM4-206ENST00000600289 POLR3EQ9NVU0 708 aa18.57■□□□□ 0.56
LSM4-206ENST00000600289 MROH7Q68CQ1 1323 aa18.56■□□□□ 0.56
LSM4-206ENST00000600289 KPNA6O60684 536 aa18.56■□□□□ 0.56
LSM4-206ENST00000600289 GH1P01241 217 aa18.56■□□□□ 0.56
LSM4-206ENST00000600289 ICAM3P32942 547 aa18.56■□□□□ 0.56
LSM4-206ENST00000600289 CLK2P49760 499 aaKnown RBP18.56■□□□□ 0.56
LSM4-206ENST00000600289 ADCY7P51828 1080 aa18.56■□□□□ 0.56
LSM4-206ENST00000600289 CCT2P78371 535 aaKnown RBP18.56■□□□□ 0.56
LSM4-206ENST00000600289 ARHGAP1Q07960 439 aa18.56■□□□□ 0.56
LSM4-206ENST00000600289 TRIM60Q495X7 471 aa18.56■□□□□ 0.56
LSM4-206ENST00000600289 BRDTQ58F21 947 aaPredicted RBP18.56■□□□□ 0.56
LSM4-206ENST00000600289 FAM177A1Q8N128 213 aaPredicted RBP18.56■□□□□ 0.56
LSM4-206ENST00000600289 PHKBQ93100 1093 aa18.56■□□□□ 0.56
LSM4-206ENST00000600289 NCOA5Q9HCD5 579 aaKnown RBP18.56■□□□□ 0.56
LSM4-206ENST00000600289 MRVI1Q9Y6F6 885 aa18.56■□□□□ 0.56
LSM4-206ENST00000600289 A0A0U1RQG5 324 aaPredicted RBP18.55■□□□□ 0.56
LSM4-206ENST00000600289 SPDYE3A6NKU9 549 aa18.55■□□□□ 0.56
LSM4-206ENST00000600289 PFKFB2O60825 505 aa18.55■□□□□ 0.56
LSM4-206ENST00000600289 FOSP01100 380 aaPredicted RBP18.55■□□□□ 0.56
LSM4-206ENST00000600289 CDK7P50613 346 aa18.55■□□□□ 0.56
LSM4-206ENST00000600289 AK2P54819 239 aa18.55■□□□□ 0.56
LSM4-206ENST00000600289 AKAP17AQ02040 695 aaKnown RBP18.55■□□□□ 0.56
LSM4-206ENST00000600289 AP3B2Q13367 1082 aa18.55■□□□□ 0.56
LSM4-206ENST00000600289 UBE2SQ16763 222 aa18.55■□□□□ 0.56
LSM4-206ENST00000600289 LY6KQ17RY6 165 aa18.55■□□□□ 0.56
LSM4-206ENST00000600289 GNPTABQ3T906 1256 aa18.55■□□□□ 0.56
LSM4-206ENST00000600289 MCTP2Q6DN12 878 aa18.55■□□□□ 0.56
LSM4-206ENST00000600289 SLC43A3Q8NBI5 491 aa18.55■□□□□ 0.56
LSM4-206ENST00000600289 COPS5Q92905 334 aa18.55■□□□□ 0.56
LSM4-206ENST00000600289 ZMYND12Q9H0C1 365 aa18.55■□□□□ 0.56
LSM4-206ENST00000600289 EHMT1Q9H9B1 1298 aa18.55■□□□□ 0.56
LSM4-206ENST00000600289 ATP11BQ9Y2G3 1177 aa18.55■□□□□ 0.56
LSM4-206ENST00000600289 TCF20Q9UGU0 1960 aaKnown RBP18.55■□□□□ 0.56
LSM4-206ENST00000600289 SMCO2A6NFE2 343 aa18.54■□□□□ 0.56
LSM4-206ENST00000600289 PURAQ00577 322 aaKnown RBP18.54■□□□□ 0.56
LSM4-206ENST00000600289 CPLX2Q6PUV4 134 aaKnown RBP18.54■□□□□ 0.56
LSM4-206ENST00000600289 CXCL17Q6UXB2 119 aa18.54■□□□□ 0.56
LSM4-206ENST00000600289 TRIM22Q8IYM9 498 aa18.54■□□□□ 0.56
LSM4-206ENST00000600289 SLC26A6Q9BXS9 759 aa18.54■□□□□ 0.56
LSM4-206ENST00000600289 SH3GLB2Q9NR46 395 aa18.54■□□□□ 0.56
LSM4-206ENST00000600289 TPCN1Q9ULQ1 816 aa18.54■□□□□ 0.56
LSM4-206ENST00000600289 PCDHA6Q9UN73 950 aa18.54■□□□□ 0.56
LSM4-206ENST00000600289 PCDHA8Q9Y5H6 950 aa18.54■□□□□ 0.56
LSM4-206ENST00000600289 XIRP2A4UGR9 3374 aa18.54■□□□□ 0.56
LSM4-206ENST00000600289 STK36Q9NRP7 1315 aa18.53■□□□□ 0.56
LSM4-206ENST00000600289 ARVCFO00192 962 aa18.53■□□□□ 0.56
LSM4-206ENST00000600289 CPLX1O14810 134 aa18.53■□□□□ 0.56
LSM4-206ENST00000600289 FIBPO43427 364 aa18.53■□□□□ 0.56
LSM4-206ENST00000600289 HOXD8P13378 290 aaPredicted RBP18.53■□□□□ 0.56
LSM4-206ENST00000600289 RBM25P49756 843 aaKnown RBP18.53■□□□□ 0.56
LSM4-206ENST00000600289 TLE2Q04725 743 aa18.53■□□□□ 0.56
LSM4-206ENST00000600289 SCRN1Q12765 414 aa18.53■□□□□ 0.56
LSM4-206ENST00000600289 LAMC2Q13753 1193 aa18.53■□□□□ 0.56
LSM4-206ENST00000600289 CCDC148Q8NFR7 591 aa18.53■□□□□ 0.56
LSM4-206ENST00000600289 PDLIM7Q9NR12 457 aa18.53■□□□□ 0.56
LSM4-206ENST00000600289 SPATA31C2B4DYI2 1134 aa18.52■□□□□ 0.56
LSM4-206ENST00000600289 CDKL5O76039 1030 aa18.52■□□□□ 0.56
LSM4-206ENST00000600289 DEXIO95424 95 aa18.52■□□□□ 0.56
LSM4-206ENST00000600289 MMP3P08254 477 aa18.52■□□□□ 0.56
LSM4-206ENST00000600289 UBA1P22314 1058 aaKnown RBP18.52■□□□□ 0.56
LSM4-206ENST00000600289 NEK4P51957 841 aa18.52■□□□□ 0.56
LSM4-206ENST00000600289 SSRP1Q08945 709 aaKnown RBP18.52■□□□□ 0.56
LSM4-206ENST00000600289 GRIN2CQ14957 1233 aa18.52■□□□□ 0.56
LSM4-206ENST00000600289 CELF3Q5SZQ8 465 aaKnown RBP18.52■□□□□ 0.56
LSM4-206ENST00000600289 MYSM1Q5VVJ2 828 aa18.52■□□□□ 0.56
LSM4-206ENST00000600289 PPTC7Q8NI37 304 aa18.52■□□□□ 0.56
LSM4-206ENST00000600289 ADAMTS19Q8TE59 1207 aa18.52■□□□□ 0.56
LSM4-206ENST00000600289 GPRASP2Q96D09 838 aa18.52■□□□□ 0.56
LSM4-206ENST00000600289 CDHR1Q96JP9 859 aa18.52■□□□□ 0.56
LSM4-206ENST00000600289 LARP6Q9BRS8 491 aaKnown RBP18.52■□□□□ 0.56
LSM4-206ENST00000600289 MTG1Q9BT17 334 aaPredicted RBP18.52■□□□□ 0.56
LSM4-206ENST00000600289 SLKQ9H2G2 1235 aaPredicted RBP18.52■□□□□ 0.56
LSM4-206ENST00000600289 C6orf50Q9HD87 102 aa18.52■□□□□ 0.56
LSM4-206ENST00000600289 CHD9Q3L8U1 2897 aa18.52■□□□□ 0.56
LSM4-206ENST00000600289 CLTBP09497 229 aa18.51■□□□□ 0.55
LSM4-206ENST00000600289 GNA11P29992 359 aa18.51■□□□□ 0.55
LSM4-206ENST00000600289 SREBF1P36956 1147 aa18.51■□□□□ 0.55
LSM4-206ENST00000600289 SP2Q02086 613 aa18.51■□□□□ 0.55
LSM4-206ENST00000600289 STK3Q13188 491 aa18.51■□□□□ 0.55
LSM4-206ENST00000600289 SEMA3FQ13275 785 aa18.51■□□□□ 0.55
LSM4-206ENST00000600289 ITGA7Q13683 1181 aa18.51■□□□□ 0.55
LSM4-206ENST00000600289 NLRX1Q86UT6 975 aa18.51■□□□□ 0.55
LSM4-206ENST00000600289 FAM126BQ8IXS8 530 aa18.51■□□□□ 0.55
LSM4-206ENST00000600289 DHX37Q8IY37 1157 aaKnown RBP18.51■□□□□ 0.55
LSM4-206ENST00000600289 IL27Q8NEV9 243 aa18.51■□□□□ 0.55
LSM4-206ENST00000600289 BICD2Q8TD16 824 aa18.51■□□□□ 0.55
LSM4-206ENST00000600289 AFG1LQ8WV93 481 aa18.51■□□□□ 0.55
LSM4-206ENST00000600289 KIF2CQ99661 725 aa18.51■□□□□ 0.55
LSM4-206ENST00000600289 SENP7Q9BQF6 1050 aa18.51■□□□□ 0.55
LSM4-206ENST00000600289 ANO3Q9BYT9 981 aa18.51■□□□□ 0.55
LSM4-206ENST00000600289 C22orf23Q9BZE7 217 aa18.51■□□□□ 0.55
LSM4-206ENST00000600289 UBIAD1Q9Y5Z9 338 aa18.51■□□□□ 0.55
LSM4-206ENST00000600289 TANC1Q9C0D5 1861 aa18.51■□□□□ 0.55
LSM4-206ENST00000600289 GRIN2DO15399 1336 aa18.5■□□□□ 0.55
LSM4-206ENST00000600289 DCDC2CA8MYV0 355 aa18.5■□□□□ 0.55
LSM4-206ENST00000600289 KIAA0355O15063 1070 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms