RNA–Protein interactions for RNA: ENST00000597146.1

LIG1-214, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-214ENST00000597146 DNERQ8NFT8 737 aa18.25■□□□□ 0.51
LIG1-214ENST00000597146 PRRX2Q99811 253 aa18.25■□□□□ 0.51
LIG1-214ENST00000597146 INCENPQ9NQS7 918 aa18.25■□□□□ 0.51
LIG1-214ENST00000597146 FAM186AA6NE01 2351 aa18.25■□□□□ 0.51
LIG1-214ENST00000597146 EMSYQ7Z589 1322 aa18.24■□□□□ 0.51
LIG1-214ENST00000597146 TSPY2A6NKD2 308 aa18.24■□□□□ 0.51
LIG1-214ENST00000597146 RNF113AO15541 343 aaKnown RBP18.24■□□□□ 0.51
LIG1-214ENST00000597146 GNAT2P19087 354 aa18.24■□□□□ 0.51
LIG1-214ENST00000597146 CASTP20810 708 aaKnown RBP18.24■□□□□ 0.51
LIG1-214ENST00000597146 CTNNB1P35222 781 aa18.24■□□□□ 0.51
LIG1-214ENST00000597146 KIAA0753Q2KHM9 967 aa18.24■□□□□ 0.51
LIG1-214ENST00000597146 FBXL6Q8N531 539 aa18.24■□□□□ 0.51
LIG1-214ENST00000597146 KBTBD3Q8NAB2 608 aa18.24■□□□□ 0.51
LIG1-214ENST00000597146 DCAF4Q8WV16 495 aa18.24■□□□□ 0.51
LIG1-214ENST00000597146 OSBPL7Q9BZF2 842 aa18.24■□□□□ 0.51
LIG1-214ENST00000597146 GPCPD1Q9NPB8 672 aa18.24■□□□□ 0.51
LIG1-214ENST00000597146 ZBTB40Q9NUA8 1239 aa18.24■□□□□ 0.51
LIG1-214ENST00000597146 PATL2C9JE40 543 aaKnown RBP18.23■□□□□ 0.51
LIG1-214ENST00000597146 GRM6O15303 877 aa18.23■□□□□ 0.51
LIG1-214ENST00000597146 F2P00734 622 aa18.23■□□□□ 0.51
LIG1-214ENST00000597146 DGKDQ16760 1214 aa18.23■□□□□ 0.51
LIG1-214ENST00000597146 PLEKHG4Q58EX7 1191 aa18.23■□□□□ 0.51
LIG1-214ENST00000597146 BTNL9Q6UXG8 535 aa18.23■□□□□ 0.51
LIG1-214ENST00000597146 TOP1MTQ969P6 601 aa18.23■□□□□ 0.51
LIG1-214ENST00000597146 IGFLR1Q9H665 355 aa18.23■□□□□ 0.51
LIG1-214ENST00000597146 CD207Q9UJ71 328 aa18.23■□□□□ 0.51
LIG1-214ENST00000597146 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.23■□□□□ 0.51
LIG1-214ENST00000597146 MYH6P13533 1939 aa18.23■□□□□ 0.51
LIG1-214ENST00000597146 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.22■□□□□ 0.51
LIG1-214ENST00000597146 RSPH10B2B2RC85 870 aa18.22■□□□□ 0.51
LIG1-214ENST00000597146 NCK2O43639 380 aa18.22■□□□□ 0.51
LIG1-214ENST00000597146 SMARCA5O60264 1052 aaPredicted RBP18.22■□□□□ 0.51
LIG1-214ENST00000597146 SLC3A2P08195 630 aaKnown RBP18.22■□□□□ 0.51
LIG1-214ENST00000597146 RSPH10BP0C881 870 aa18.22■□□□□ 0.51
LIG1-214ENST00000597146 THPOP40225 353 aa18.22■□□□□ 0.51
LIG1-214ENST00000597146 ZXDAP98168 799 aa18.22■□□□□ 0.51
LIG1-214ENST00000597146 TSHZ3Q63HK5 1081 aa18.22■□□□□ 0.51
LIG1-214ENST00000597146 ATOH1Q92858 354 aaPredicted RBP18.22■□□□□ 0.51
LIG1-214ENST00000597146 SEC62Q99442 399 aaKnown RBP18.22■□□□□ 0.51
LIG1-214ENST00000597146 KATNAL1Q9BW62 490 aa18.22■□□□□ 0.51
LIG1-214ENST00000597146 HAS3O00219 553 aa18.21■□□□□ 0.51
LIG1-214ENST00000597146 CTDSPL2Q05D32 466 aa18.21■□□□□ 0.51
LIG1-214ENST00000597146 PKN1Q16512 942 aa18.21■□□□□ 0.51
LIG1-214ENST00000597146 PPP4R3BQ5MIZ7 849 aa18.21■□□□□ 0.51
LIG1-214ENST00000597146 DHX37Q8IY37 1157 aaKnown RBP18.21■□□□□ 0.51
LIG1-214ENST00000597146 IFIH1Q9BYX4 1025 aaKnown RBP18.21■□□□□ 0.51
LIG1-214ENST00000597146 NAPBQ9H115 298 aa18.21■□□□□ 0.51
LIG1-214ENST00000597146 WDR87Q6ZQQ6 2873 aa18.21■□□□□ 0.51
LIG1-214ENST00000597146 LINC00271P0C7V0 271 aa18.2■□□□□ 0.5
LIG1-214ENST00000597146 C20orf194Q5TEA3 1177 aa18.2■□□□□ 0.5
LIG1-214ENST00000597146 SERINC5Q86VE9 423 aa18.2■□□□□ 0.5
LIG1-214ENST00000597146 NACAP1Q9BZK3 213 aa18.2■□□□□ 0.5
LIG1-214ENST00000597146 GVINP1Q7Z2Y8 2422 aa18.19■□□□□ 0.5
LIG1-214ENST00000597146 B4DLN1 442 aa18.19■□□□□ 0.5
LIG1-214ENST00000597146 C5orf67F2Z3F1 127 aa18.19■□□□□ 0.5
LIG1-214ENST00000597146 RANBP6O60518 1105 aaKnown RBP18.19■□□□□ 0.5
LIG1-214ENST00000597146 CTSHP09668 335 aa18.19■□□□□ 0.5
LIG1-214ENST00000597146 NOVP48745 357 aa18.19■□□□□ 0.5
LIG1-214ENST00000597146 MRPL12P52815 198 aaKnown RBP18.19■□□□□ 0.5
LIG1-214ENST00000597146 USH1GQ495M9 461 aa18.19■□□□□ 0.5
LIG1-214ENST00000597146 ASCL5Q7RTU5 278 aa18.19■□□□□ 0.5
LIG1-214ENST00000597146 SEPT8Q92599 483 aa18.19■□□□□ 0.5
LIG1-214ENST00000597146 LMAN2LQ9H0V9 348 aa18.19■□□□□ 0.5
LIG1-214ENST00000597146 ECHDC1Q9NTX5 307 aa18.19■□□□□ 0.5
LIG1-214ENST00000597146 COL20A1Q9P218 1284 aa18.19■□□□□ 0.5
LIG1-214ENST00000597146 H0Y858 1186 aa18.18■□□□□ 0.5
LIG1-214ENST00000597146 SORBS3O60504 671 aa18.18■□□□□ 0.5
LIG1-214ENST00000597146 ZFYP08048 801 aaPredicted RBP18.18■□□□□ 0.5
LIG1-214ENST00000597146 NDUFV1P49821 464 aa18.18■□□□□ 0.5
LIG1-214ENST00000597146 FIBCD1Q8N539 461 aa18.18■□□□□ 0.5
LIG1-214ENST00000597146 TBC1D5Q92609 795 aa18.18■□□□□ 0.5
LIG1-214ENST00000597146 MSLNLQ96KJ4 702 aa18.18■□□□□ 0.5
LIG1-214ENST00000597146 TAAR1Q96RJ0 339 aa18.18■□□□□ 0.5
LIG1-214ENST00000597146 C11orf84Q9BUA3 381 aaPredicted RBP18.18■□□□□ 0.5
LIG1-214ENST00000597146 TLR9Q9NR96 1032 aa18.18■□□□□ 0.5
LIG1-214ENST00000597146 DDX41Q9UJV9 622 aaKnown RBP18.18■□□□□ 0.5
LIG1-214ENST00000597146 WDR19Q8NEZ3 1342 aa18.18■□□□□ 0.5
LIG1-214ENST00000597146 DOCK5Q9H7D0 1870 aa18.18■□□□□ 0.5
LIG1-214ENST00000597146 PLXNA4Q9HCM2 1894 aa18.18■□□□□ 0.5
LIG1-214ENST00000597146 LOC730098B7Z3J9 87 aa18.17■□□□□ 0.5
LIG1-214ENST00000597146 SIGLEC14Q08ET2 396 aa18.17■□□□□ 0.5
LIG1-214ENST00000597146 ADAM15Q13444 863 aa18.17■□□□□ 0.5
LIG1-214ENST00000597146 PPTC7Q8NI37 304 aa18.17■□□□□ 0.5
LIG1-214ENST00000597146 EMID1Q96A84 441 aaPredicted RBP18.17■□□□□ 0.5
LIG1-214ENST00000597146 IL17RAQ96F46 866 aa18.17■□□□□ 0.5
LIG1-214ENST00000597146 ASIC4Q96FT7 647 aa18.17■□□□□ 0.5
LIG1-214ENST00000597146 FOXP2O15409 715 aa18.16■□□□□ 0.5
LIG1-214ENST00000597146 EYA4O95677 639 aa18.16■□□□□ 0.5
LIG1-214ENST00000597146 PDHBP11177 359 aa18.16■□□□□ 0.5
LIG1-214ENST00000597146 AVPR2P30518 371 aa18.16■□□□□ 0.5
LIG1-214ENST00000597146 BMPR1AP36894 532 aa18.16■□□□□ 0.5
LIG1-214ENST00000597146 RRP1P56182 461 aaKnown RBP18.16■□□□□ 0.5
LIG1-214ENST00000597146 ADGRD2Q7Z7M1 963 aa18.16■□□□□ 0.5
LIG1-214ENST00000597146 SYTL5Q8TDW5 730 aaPredicted RBP18.16■□□□□ 0.5
LIG1-214ENST00000597146 TMEM47Q9BQJ4 181 aa18.16■□□□□ 0.5
LIG1-214ENST00000597146 FSD1Q9BTV5 496 aa18.16■□□□□ 0.5
LIG1-214ENST00000597146 LRRCC1Q9C099 1032 aa18.16■□□□□ 0.5
LIG1-214ENST00000597146 CLEC1BQ9P126 229 aa18.16■□□□□ 0.5
LIG1-214ENST00000597146 ADGRA3Q8IWK6 1321 aa18.16■□□□□ 0.5
LIG1-214ENST00000597146 PDGFBP01127 241 aaPredicted RBP18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms