RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 CD4P01730 458 aa24.18■■□□□ 1.46
PNKP-209ENST00000596726 UBA1P22314 1058 aaKnown RBP24.18■■□□□ 1.46
PNKP-209ENST00000596726 CLK2P49760 499 aaKnown RBP24.18■■□□□ 1.46
PNKP-209ENST00000596726 MDM2Q00987 491 aaPredicted RBP24.18■■□□□ 1.46
PNKP-209ENST00000596726 AKAP17AQ02040 695 aaKnown RBP24.18■■□□□ 1.46
PNKP-209ENST00000596726 DHX37Q8IY37 1157 aaKnown RBP24.18■■□□□ 1.46
PNKP-209ENST00000596726 SLC26A6Q9BXS9 759 aa24.18■■□□□ 1.46
PNKP-209ENST00000596726 TMEM39AQ9NV64 488 aa24.18■■□□□ 1.46
PNKP-209ENST00000596726 A0A1W2PPC1 479 aa24.17■■□□□ 1.46
PNKP-209ENST00000596726 FIBPO43427 364 aa24.17■■□□□ 1.46
PNKP-209ENST00000596726 FOSP01100 380 aaPredicted RBP24.17■■□□□ 1.46
PNKP-209ENST00000596726 ITGB8P26012 769 aa24.17■■□□□ 1.46
PNKP-209ENST00000596726 PPTC7Q8NI37 304 aa24.17■■□□□ 1.46
PNKP-209ENST00000596726 LBHD1Q9BQE6 289 aaPredicted RBP24.17■■□□□ 1.46
PNKP-209ENST00000596726 ZMYND12Q9H0C1 365 aa24.17■■□□□ 1.46
PNKP-209ENST00000596726 TBX21Q9UL17 535 aa24.17■■□□□ 1.46
PNKP-209ENST00000596726 TPCN1Q9ULQ1 816 aa24.17■■□□□ 1.46
PNKP-209ENST00000596726 PPFIA3O75145 1194 aa24.16■■□□□ 1.46
PNKP-209ENST00000596726 GGPS1O95749 300 aa24.16■■□□□ 1.46
PNKP-209ENST00000596726 HOXD8P13378 290 aaPredicted RBP24.16■■□□□ 1.46
PNKP-209ENST00000596726 AK2P54819 239 aa24.16■■□□□ 1.46
PNKP-209ENST00000596726 STK3Q13188 491 aa24.16■■□□□ 1.46
PNKP-209ENST00000596726 EHMT1Q9H9B1 1298 aa24.16■■□□□ 1.46
PNKP-209ENST00000596726 UBIAD1Q9Y5Z9 338 aa24.16■■□□□ 1.46
PNKP-209ENST00000596726 TLR3O15455 904 aaKnown RBP24.15■■□□□ 1.46
PNKP-209ENST00000596726 SCRN1Q12765 414 aa24.15■■□□□ 1.46
PNKP-209ENST00000596726 AP3B2Q13367 1082 aa24.15■■□□□ 1.46
PNKP-209ENST00000596726 ANKRD1Q15327 319 aa24.15■■□□□ 1.46
PNKP-209ENST00000596726 DGKDQ16760 1214 aa24.15■■□□□ 1.46
PNKP-209ENST00000596726 NLRX1Q86UT6 975 aa24.15■■□□□ 1.46
PNKP-209ENST00000596726 CCDC12Q8WUD4 166 aaPredicted RBP24.15■■□□□ 1.46
PNKP-209ENST00000596726 KAT2BQ92831 832 aa24.15■■□□□ 1.46
PNKP-209ENST00000596726 BADQ92934 168 aa24.15■■□□□ 1.46
PNKP-209ENST00000596726 GPRASP2Q96D09 838 aa24.15■■□□□ 1.46
PNKP-209ENST00000596726 BCAS3Q9H6U6 928 aa24.15■■□□□ 1.46
PNKP-209ENST00000596726 PFKFB2O60825 505 aa24.14■■□□□ 1.45
PNKP-209ENST00000596726 ITGB5P18084 799 aa24.14■■□□□ 1.45
PNKP-209ENST00000596726 SSRP1Q08945 709 aaKnown RBP24.14■■□□□ 1.45
PNKP-209ENST00000596726 NEDD9Q14511 834 aa24.14■■□□□ 1.45
PNKP-209ENST00000596726 NBPF20Q3BBV1 942 aa24.14■■□□□ 1.45
PNKP-209ENST00000596726 HSDL1Q3SXM5 330 aa24.14■■□□□ 1.45
PNKP-209ENST00000596726 NFRKBQ6P4R8 1299 aa24.14■■□□□ 1.45
PNKP-209ENST00000596726 PGBD1Q96JS3 809 aa24.14■■□□□ 1.45
PNKP-209ENST00000596726 SENP7Q9BQF6 1050 aa24.14■■□□□ 1.45
PNKP-209ENST00000596726 ANO3Q9BYT9 981 aa24.14■■□□□ 1.45
PNKP-209ENST00000596726 UBE2OQ9C0C9 1292 aaKnown RBP24.14■■□□□ 1.45
PNKP-209ENST00000596726 TMEM260Q9NX78 707 aa24.14■■□□□ 1.45
PNKP-209ENST00000596726 CPLX1O14810 134 aa24.13■■□□□ 1.45
PNKP-209ENST00000596726 ADAMTS3O15072 1205 aa24.13■■□□□ 1.45
PNKP-209ENST00000596726 B4GALT4O60513 344 aa24.13■■□□□ 1.45
PNKP-209ENST00000596726 PPFIA4O75335 1185 aa24.13■■□□□ 1.45
PNKP-209ENST00000596726 RAG1P15918 1043 aa24.13■■□□□ 1.45
PNKP-209ENST00000596726 CPLX2Q6PUV4 134 aaKnown RBP24.13■■□□□ 1.45
PNKP-209ENST00000596726 TRIM22Q8IYM9 498 aa24.13■■□□□ 1.45
PNKP-209ENST00000596726 SPATA33Q96N06 139 aa24.13■■□□□ 1.45
PNKP-209ENST00000596726 SLKQ9H2G2 1235 aaPredicted RBP24.13■■□□□ 1.45
PNKP-209ENST00000596726 MLXIPQ9HAP2 919 aa24.13■■□□□ 1.45
PNKP-209ENST00000596726 C6orf50Q9HD87 102 aa24.13■■□□□ 1.45
PNKP-209ENST00000596726 SH3GLB2Q9NR46 395 aa24.13■■□□□ 1.45
PNKP-209ENST00000596726 SORBS3O60504 671 aa24.12■■□□□ 1.45
PNKP-209ENST00000596726 TIMP1P01033 207 aa24.12■■□□□ 1.45
PNKP-209ENST00000596726 SREBF1P36956 1147 aa24.12■■□□□ 1.45
PNKP-209ENST00000596726 NEK4P51957 841 aa24.12■■□□□ 1.45
PNKP-209ENST00000596726 PTPN11Q06124 597 aaPredicted RBP24.12■■□□□ 1.45
PNKP-209ENST00000596726 METTL7BQ6UX53 244 aa24.12■■□□□ 1.45
PNKP-209ENST00000596726 CDHR1Q96JP9 859 aa24.12■■□□□ 1.45
PNKP-209ENST00000596726 TRPV6Q9H1D0 765 aa24.12■■□□□ 1.45
PNKP-209ENST00000596726 JADE2Q9NQC1 790 aa24.12■■□□□ 1.45
PNKP-209ENST00000596726 MAFGO15525 162 aa24.11■■□□□ 1.45
PNKP-209ENST00000596726 DEXIO95424 95 aa24.11■■□□□ 1.45
PNKP-209ENST00000596726 GNA11P29992 359 aa24.11■■□□□ 1.45
PNKP-209ENST00000596726 JAKMIP3Q5VZ66 844 aa24.11■■□□□ 1.45
PNKP-209ENST00000596726 MCTP2Q6DN12 878 aa24.11■■□□□ 1.45
PNKP-209ENST00000596726 CYFIP1Q7L576 1253 aa24.11■■□□□ 1.45
PNKP-209ENST00000596726 CCDC148Q8NFR7 591 aa24.11■■□□□ 1.45
PNKP-209ENST00000596726 MXRA8Q9BRK3 442 aa24.11■■□□□ 1.45
PNKP-209ENST00000596726 VPS54Q9P1Q0 977 aa24.11■■□□□ 1.45
PNKP-209ENST00000596726 HAS3O00219 553 aa24.1■■□□□ 1.45
PNKP-209ENST00000596726 ATP9AO75110 1047 aa24.1■■□□□ 1.45
PNKP-209ENST00000596726 F2P00734 622 aa24.1■■□□□ 1.45
PNKP-209ENST00000596726 KCNA2P16389 499 aa24.1■■□□□ 1.45
PNKP-209ENST00000596726 SESTD1Q86VW0 696 aa24.1■■□□□ 1.45
PNKP-209ENST00000596726 TDHQ8IZJ6 230 aa24.1■■□□□ 1.45
PNKP-209ENST00000596726 GIMAP8Q8ND71 665 aaPredicted RBP24.1■■□□□ 1.45
PNKP-209ENST00000596726 CRYGNQ8WXF5 182 aa24.1■■□□□ 1.45
PNKP-209ENST00000596726 FXR1P51114 621 aaKnown RBP eCLIP24.09■■□□□ 1.45
PNKP-209ENST00000596726 MTMR1Q13613 665 aa24.09■■□□□ 1.45
PNKP-209ENST00000596726 ME3Q16798 604 aa24.09■■□□□ 1.45
PNKP-209ENST00000596726 REXO1Q8N1G1 1221 aaKnown RBP24.09■■□□□ 1.45
PNKP-209ENST00000596726 BICD2Q8TD16 824 aa24.09■■□□□ 1.45
PNKP-209ENST00000596726 PPP1R13LQ8WUF5 828 aa24.09■■□□□ 1.45
PNKP-209ENST00000596726 KIF2CQ99661 725 aa24.09■■□□□ 1.45
PNKP-209ENST00000596726 GPR20Q99678 358 aa24.09■■□□□ 1.45
PNKP-209ENST00000596726 TRMT13Q9NUP7 481 aaKnown RBP24.09■■□□□ 1.45
PNKP-209ENST00000596726 CDKL5O76039 1030 aa24.08■■□□□ 1.45
PNKP-209ENST00000596726 LARGE1O95461 756 aa24.08■■□□□ 1.45
PNKP-209ENST00000596726 CTDNEP1O95476 244 aa24.08■■□□□ 1.45
PNKP-209ENST00000596726 CYP3A4P08684 503 aa24.08■■□□□ 1.45
PNKP-209ENST00000596726 SUPT20HL2P0C7V6 817 aa24.08■■□□□ 1.45
PNKP-209ENST00000596726 ZNF286BP0CG31 522 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms