RNA–Protein interactions for RNA: ENST00000594047.2

SYNM-204, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 6,407 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-204ENST00000594047 DBNLQ9UJU6 430 aaKnown RBP19.83■□□□□ 0.76
SYNM-204ENST00000594047 STX2P32856 288 aa19.82■□□□□ 0.76
SYNM-204ENST00000594047 MFAP3P55082 362 aa19.82■□□□□ 0.76
SYNM-204ENST00000594047 BBS5Q8N3I7 341 aa19.82■□□□□ 0.76
SYNM-204ENST00000594047 CACTINQ8WUQ7 758 aaKnown RBP19.82■□□□□ 0.76
SYNM-204ENST00000594047 ZNF157P51786 506 aaPredicted RBP19.82■□□□□ 0.76
SYNM-204ENST00000594047 MSTO1Q9BUK6 570 aa19.82■□□□□ 0.76
SYNM-204ENST00000594047 ATF2P15336 505 aa19.82■□□□□ 0.76
SYNM-204ENST00000594047 POLR2BP30876 1174 aaKnown RBP19.82■□□□□ 0.76
SYNM-204ENST00000594047 ACCSQ96QU6 501 aa19.82■□□□□ 0.76
SYNM-204ENST00000594047 GFPT2O94808 682 aa19.82■□□□□ 0.76
SYNM-204ENST00000594047 PCK1P35558 622 aa19.82■□□□□ 0.76
SYNM-204ENST00000594047 CNOT6LQ96LI5 555 aaKnown RBP19.82■□□□□ 0.76
SYNM-204ENST00000594047 FAM114A2Q9NRY5 505 aa19.82■□□□□ 0.76
SYNM-204ENST00000594047 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.82■□□□□ 0.76
SYNM-204ENST00000594047 SFMBT1Q9UHJ3 866 aa19.82■□□□□ 0.76
SYNM-204ENST00000594047 KRBA2Q6ZNG9 492 aa19.82■□□□□ 0.76
SYNM-204ENST00000594047 RHPN2Q8IUC4 686 aa19.82■□□□□ 0.76
SYNM-204ENST00000594047 PASD1Q8IV76 773 aa19.82■□□□□ 0.76
SYNM-204ENST00000594047 NUP160Q12769 1436 aa19.82■□□□□ 0.76
SYNM-204ENST00000594047 MYO1EQ12965 1108 aa19.81■□□□□ 0.76
SYNM-204ENST00000594047 PDE1CQ14123 709 aaPredicted RBP19.81■□□□□ 0.76
SYNM-204ENST00000594047 ZNF449Q6P9G9 518 aa19.81■□□□□ 0.76
SYNM-204ENST00000594047 H0YCG3 227 aa19.81■□□□□ 0.76
SYNM-204ENST00000594047 BAG2O95816 211 aa19.81■□□□□ 0.76
SYNM-204ENST00000594047 BABAM1Q9NWV8 329 aa19.81■□□□□ 0.76
SYNM-204ENST00000594047 NDUFAB1O14561 156 aa19.81■□□□□ 0.76
SYNM-204ENST00000594047 PPP2R5BQ15173 497 aa19.81■□□□□ 0.76
SYNM-204ENST00000594047 TRPC7Q9HCX4 862 aa19.81■□□□□ 0.76
SYNM-204ENST00000594047 TMTC1Q8IUR5 882 aa19.81■□□□□ 0.76
SYNM-204ENST00000594047 ARFGAP2Q8N6H7 521 aa19.81■□□□□ 0.76
SYNM-204ENST00000594047 TTC25Q96NG3 672 aa19.81■□□□□ 0.76
SYNM-204ENST00000594047 PDE1BQ01064 536 aa19.81■□□□□ 0.76
SYNM-204ENST00000594047 SPP2Q13103 211 aa19.81■□□□□ 0.76
SYNM-204ENST00000594047 MARCH10Q8NA82 808 aaPredicted RBP19.81■□□□□ 0.76
SYNM-204ENST00000594047 LARP4BQ92615 738 aaKnown RBP19.81■□□□□ 0.76
SYNM-204ENST00000594047 KRT1P04264 644 aa19.8■□□□□ 0.76
SYNM-204ENST00000594047 CTSHP09668 335 aa19.8■□□□□ 0.76
SYNM-204ENST00000594047 CTNNA1P35221 906 aaKnown RBP19.8■□□□□ 0.76
SYNM-204ENST00000594047 NR5A1Q13285 461 aa19.8■□□□□ 0.76
SYNM-204ENST00000594047 ACBD5Q5T8D3 534 aaPredicted RBP19.8■□□□□ 0.76
SYNM-204ENST00000594047 DARS2Q6PI48 645 aaKnown RBP19.8■□□□□ 0.76
SYNM-204ENST00000594047 TACO1Q9BSH4 297 aaKnown RBP19.8■□□□□ 0.76
SYNM-204ENST00000594047 MAPK4P31152 587 aa19.8■□□□□ 0.76
SYNM-204ENST00000594047 PGBD3Q8N328 593 aa19.8■□□□□ 0.76
SYNM-204ENST00000594047 CEP120Q8N960 986 aa19.8■□□□□ 0.76
SYNM-204ENST00000594047 CCDC17Q96LX7 622 aa19.8■□□□□ 0.76
SYNM-204ENST00000594047 PIK3R2O00459 728 aa19.8■□□□□ 0.76
SYNM-204ENST00000594047 ATP1A2P50993 1020 aa19.8■□□□□ 0.76
SYNM-204ENST00000594047 GOLGA5Q8TBA6 731 aa19.8■□□□□ 0.76
SYNM-204ENST00000594047 RGS16O15492 202 aaPredicted RBP19.8■□□□□ 0.76
SYNM-204ENST00000594047 NMT2O60551 498 aa19.8■□□□□ 0.76
SYNM-204ENST00000594047 GSPT1P15170 499 aaKnown RBP19.8■□□□□ 0.76
SYNM-204ENST00000594047 IRX4P78413 519 aa19.8■□□□□ 0.76
SYNM-204ENST00000594047 EHHADHQ08426 723 aa19.8■□□□□ 0.76
SYNM-204ENST00000594047 ANKRD20A3Q5VUR7 823 aa19.8■□□□□ 0.76
SYNM-204ENST00000594047 PNMA8AQ86V59 439 aaPredicted RBP19.8■□□□□ 0.76
SYNM-204ENST00000594047 RPGRIP1Q96KN7 1286 aa19.8■□□□□ 0.76
SYNM-204ENST00000594047 N4BP1O75113 896 aaKnown RBP19.8■□□□□ 0.76
SYNM-204ENST00000594047 LMNB1P20700 586 aa19.8■□□□□ 0.76
SYNM-204ENST00000594047 PDIA3P30101 505 aaKnown RBP19.8■□□□□ 0.76
SYNM-204ENST00000594047 SESN3P58005 492 aa19.8■□□□□ 0.76
SYNM-204ENST00000594047 ZBTB41Q5SVQ8 909 aa19.8■□□□□ 0.76
SYNM-204ENST00000594047 PHBP35232 272 aa19.79■□□□□ 0.76
SYNM-204ENST00000594047 PIH1D3Q9NQM4 214 aaKnown RBP19.79■□□□□ 0.76
SYNM-204ENST00000594047 BASP1P80723 227 aaKnown RBP19.79■□□□□ 0.76
SYNM-204ENST00000594047 FAM186BQ8IYM0 893 aa19.79■□□□□ 0.76
SYNM-204ENST00000594047 DNAJC17Q9NVM6 304 aaKnown RBP19.79■□□□□ 0.76
SYNM-204ENST00000594047 USP17L5A8MUK1 530 aa19.79■□□□□ 0.76
SYNM-204ENST00000594047 WDR64B1ANS9 1081 aa19.79■□□□□ 0.76
SYNM-204ENST00000594047 ADCK5Q3MIX3 580 aa19.79■□□□□ 0.76
SYNM-204ENST00000594047 CCDC84Q86UT8 332 aaPredicted RBP19.79■□□□□ 0.76
SYNM-204ENST00000594047 FANCLQ9NW38 375 aa19.79■□□□□ 0.76
SYNM-204ENST00000594047 GPATCH4Q5T3I0 446 aaKnown RBP19.79■□□□□ 0.76
SYNM-204ENST00000594047 FEZ2Q9UHY8 353 aaPredicted RBP19.79■□□□□ 0.76
SYNM-204ENST00000594047 ENC1O14682 589 aa19.78■□□□□ 0.76
SYNM-204ENST00000594047 THOC5Q13769 683 aaKnown RBP19.78■□□□□ 0.76
SYNM-204ENST00000594047 SLC44A5Q8NCS7 719 aa19.78■□□□□ 0.76
SYNM-204ENST00000594047 LBHD1Q9BQE6 289 aaPredicted RBP19.78■□□□□ 0.76
SYNM-204ENST00000594047 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.78■□□□□ 0.76
SYNM-204ENST00000594047 SARS2Q9NP81 518 aaKnown RBP19.78■□□□□ 0.76
SYNM-204ENST00000594047 CASQ2O14958 399 aaPredicted RBP19.78■□□□□ 0.76
SYNM-204ENST00000594047 MOCS2O96007 188 aaPredicted RBP19.78■□□□□ 0.76
SYNM-204ENST00000594047 SUGT1Q9Y2Z0 365 aa19.78■□□□□ 0.76
SYNM-204ENST00000594047 TMEM62Q0P6H9 643 aa19.78■□□□□ 0.76
SYNM-204ENST00000594047 CYFIP1Q7L576 1253 aa19.78■□□□□ 0.76
SYNM-204ENST00000594047 FAM133AQ8N9E0 248 aa19.78■□□□□ 0.76
SYNM-204ENST00000594047 YIPF2Q9BWQ6 316 aa19.78■□□□□ 0.76
SYNM-204ENST00000594047 PSMC2P35998 433 aaKnown RBP19.78■□□□□ 0.76
SYNM-204ENST00000594047 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.78■□□□□ 0.76
SYNM-204ENST00000594047 AFF4Q9UHB7 1163 aaKnown RBP19.78■□□□□ 0.76
SYNM-204ENST00000594047 COPB2P35606 906 aa19.77■□□□□ 0.76
SYNM-204ENST00000594047 GPBP1L1Q9HC44 474 aaPredicted RBP19.77■□□□□ 0.76
SYNM-204ENST00000594047 ATP8B3O60423 1300 aa19.77■□□□□ 0.76
SYNM-204ENST00000594047 MYL1P05976 194 aa19.77■□□□□ 0.76
SYNM-204ENST00000594047 KRT3P12035 628 aa19.77■□□□□ 0.76
SYNM-204ENST00000594047 CXCR5P32302 372 aa19.77■□□□□ 0.76
SYNM-204ENST00000594047 ARHGEF1Q92888 912 aaKnown RBP19.77■□□□□ 0.76
SYNM-204ENST00000594047 FGD4Q96M96 766 aa19.77■□□□□ 0.76
SYNM-204ENST00000594047 RMDN3Q96TC7 470 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms