RNA–Protein interactions for RNA: ENST00000592839.6

SF3A2-207, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-207ENST00000592839 GUCD1Q96NT3 240 aa17.13■□□□□ 0.33
SF3A2-207ENST00000592839 PPP1R12CQ9BZL4 782 aa17.13■□□□□ 0.33
SF3A2-207ENST00000592839 FAM217BQ9NTX9 383 aaPredicted RBP17.13■□□□□ 0.33
SF3A2-207ENST00000592839 TRMT13Q9NUP7 481 aaKnown RBP17.13■□□□□ 0.33
SF3A2-207ENST00000592839 GTF2IRD1Q9UHL9 959 aa17.13■□□□□ 0.33
SF3A2-207ENST00000592839 BRPF3Q9ULD4 1205 aa17.13■□□□□ 0.33
SF3A2-207ENST00000592839 SP2Q02086 613 aa17.12■□□□□ 0.33
SF3A2-207ENST00000592839 HSDL1Q3SXM5 330 aa17.12■□□□□ 0.33
SF3A2-207ENST00000592839 METTL7BQ6UX53 244 aa17.12■□□□□ 0.33
SF3A2-207ENST00000592839 DHX37Q8IY37 1157 aaKnown RBP17.12■□□□□ 0.33
SF3A2-207ENST00000592839 CAGE1Q8TC20 777 aa17.12■□□□□ 0.33
SF3A2-207ENST00000592839 LRRC2Q9BYS8 371 aa17.12■□□□□ 0.33
SF3A2-207ENST00000592839 SNX14Q9Y5W7 946 aa17.12■□□□□ 0.33
SF3A2-207ENST00000592839 SCN5AQ14524 2016 aa17.11■□□□□ 0.33
SF3A2-207ENST00000592839 TET1Q8NFU7 2136 aa17.11■□□□□ 0.33
SF3A2-207ENST00000592839 ZBTB43O43298 467 aa17.11■□□□□ 0.33
SF3A2-207ENST00000592839 PARNO95453 639 aaKnown RBP17.11■□□□□ 0.33
SF3A2-207ENST00000592839 RXRAP19793 462 aa17.11■□□□□ 0.33
SF3A2-207ENST00000592839 NEDD9Q14511 834 aa17.11■□□□□ 0.33
SF3A2-207ENST00000592839 USP17L6PQ6QN14 398 aa17.11■□□□□ 0.33
SF3A2-207ENST00000592839 SYNE3Q6ZMZ3 975 aa17.11■□□□□ 0.33
SF3A2-207ENST00000592839 ZNF365Q70YC5 407 aa17.11■□□□□ 0.33
SF3A2-207ENST00000592839 FCHSD1Q86WN1 690 aa17.11■□□□□ 0.33
SF3A2-207ENST00000592839 RPUSD2Q8IZ73 545 aaKnown RBP17.11■□□□□ 0.33
SF3A2-207ENST00000592839 CUL5Q93034 780 aa17.11■□□□□ 0.33
SF3A2-207ENST00000592839 GPRASP2Q96D09 838 aa17.11■□□□□ 0.33
SF3A2-207ENST00000592839 C16orf70Q9BSU1 422 aa17.11■□□□□ 0.33
SF3A2-207ENST00000592839 PSTPIP2Q9H939 334 aa17.11■□□□□ 0.33
SF3A2-207ENST00000592839 CHD7Q9P2D1 2997 aa17.11■□□□□ 0.33
SF3A2-207ENST00000592839 TRIP12Q14669 1992 aaPredicted RBP17.11■□□□□ 0.33
SF3A2-207ENST00000592839 EYSQ5T1H1 3165 aa17.11■□□□□ 0.33
SF3A2-207ENST00000592839 MAFGO15525 162 aa17.1■□□□□ 0.33
SF3A2-207ENST00000592839 GGPS1O95749 300 aa17.1■□□□□ 0.33
SF3A2-207ENST00000592839 MYCLP12524 364 aaPredicted RBP17.1■□□□□ 0.33
SF3A2-207ENST00000592839 RTN1Q16799 776 aa17.1■□□□□ 0.33
SF3A2-207ENST00000592839 GIMAP8Q8ND71 665 aaPredicted RBP17.1■□□□□ 0.33
SF3A2-207ENST00000592839 SMARCC2Q8TAQ2 1214 aa17.1■□□□□ 0.33
SF3A2-207ENST00000592839 AFAP1L1Q8TED9 768 aa17.1■□□□□ 0.33
SF3A2-207ENST00000592839 CDHR1Q96JP9 859 aa17.1■□□□□ 0.33
SF3A2-207ENST00000592839 MTIF3Q9H2K0 278 aaKnown RBP17.1■□□□□ 0.33
SF3A2-207ENST00000592839 TTYH1Q9H313 450 aaPredicted RBP17.1■□□□□ 0.33
SF3A2-207ENST00000592839 SEMA6BQ9H3T3 888 aa17.1■□□□□ 0.33
SF3A2-207ENST00000592839 DOCK5Q9H7D0 1870 aa17.1■□□□□ 0.33
SF3A2-207ENST00000592839 UNC80Q8N2C7 3258 aa17.09■□□□□ 0.33
SF3A2-207ENST00000592839 ESYT2A0FGR8 921 aa17.09■□□□□ 0.33
SF3A2-207ENST00000592839 IQCF3P0C7M6 154 aa17.09■□□□□ 0.33
SF3A2-207ENST00000592839 CYP2C9P11712 490 aa17.09■□□□□ 0.33
SF3A2-207ENST00000592839 CLK2P49760 499 aaKnown RBP17.09■□□□□ 0.33
SF3A2-207ENST00000592839 PSEN2P49810 448 aa17.09■□□□□ 0.33
SF3A2-207ENST00000592839 BFSP2Q13515 415 aa17.09■□□□□ 0.33
SF3A2-207ENST00000592839 WWC2Q6AWC2 1192 aa17.09■□□□□ 0.33
SF3A2-207ENST00000592839 TYW1BQ6NUM6 668 aa17.09■□□□□ 0.33
SF3A2-207ENST00000592839 CMTR1Q8N1G2 835 aaKnown RBP17.09■□□□□ 0.33
SF3A2-207ENST00000592839 SPATA33Q96N06 139 aa17.09■□□□□ 0.33
SF3A2-207ENST00000592839 GLT8D2Q9H1C3 349 aa17.09■□□□□ 0.33
SF3A2-207ENST00000592839 BARHL2Q9NY43 387 aa17.09■□□□□ 0.33
SF3A2-207ENST00000592839 UBIAD1Q9Y5Z9 338 aa17.09■□□□□ 0.33
SF3A2-207ENST00000592839 GBF1Q92538 1859 aa17.09■□□□□ 0.33
SF3A2-207ENST00000592839 CCDC196A0A1B0GTZ2 297 aa17.08■□□□□ 0.32
SF3A2-207ENST00000592839 FGBP02675 491 aa17.08■□□□□ 0.32
SF3A2-207ENST00000592839 CXCL10P02778 98 aa17.08■□□□□ 0.32
SF3A2-207ENST00000592839 RPS6KB1P23443 525 aa17.08■□□□□ 0.32
SF3A2-207ENST00000592839 DNAJB2P25686 324 aa17.08■□□□□ 0.32
SF3A2-207ENST00000592839 CDC27P30260 824 aa17.08■□□□□ 0.32
SF3A2-207ENST00000592839 MFSD10Q14728 455 aa17.08■□□□□ 0.32
SF3A2-207ENST00000592839 TRIM71Q2Q1W2 868 aaKnown RBP17.08■□□□□ 0.32
SF3A2-207ENST00000592839 GDF6Q6KF10 455 aaPredicted RBP17.08■□□□□ 0.32
SF3A2-207ENST00000592839 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.08■□□□□ 0.32
SF3A2-207ENST00000592839 CCDC155Q8N6L0 562 aa17.08■□□□□ 0.32
SF3A2-207ENST00000592839 CRYGNQ8WXF5 182 aa17.08■□□□□ 0.32
SF3A2-207ENST00000592839 DHX38Q92620 1227 aaKnown RBP17.08■□□□□ 0.32
SF3A2-207ENST00000592839 GPKOWQ92917 476 aaPredicted RBP eCLIP17.08■□□□□ 0.32
SF3A2-207ENST00000592839 IL17RAQ96F46 866 aa17.08■□□□□ 0.32
SF3A2-207ENST00000592839 CDX2Q99626 313 aaPredicted RBP17.08■□□□□ 0.32
SF3A2-207ENST00000592839 USP26Q9BXU7 913 aa17.08■□□□□ 0.32
SF3A2-207ENST00000592839 TM6SF1Q9BZW5 370 aa17.08■□□□□ 0.32
SF3A2-207ENST00000592839 RIC8AQ9NPQ8 531 aa17.08■□□□□ 0.32
SF3A2-207ENST00000592839 KLF18A0A0U1RQI7 1052 aa17.07■□□□□ 0.32
SF3A2-207ENST00000592839 STXBP3O00186 592 aa17.07■□□□□ 0.32
SF3A2-207ENST00000592839 FOSP01100 380 aaPredicted RBP17.07■□□□□ 0.32
SF3A2-207ENST00000592839 NEFLP07196 543 aa17.07■□□□□ 0.32
SF3A2-207ENST00000592839 KCNA2P16389 499 aa17.07■□□□□ 0.32
SF3A2-207ENST00000592839 ITGB5P18084 799 aa17.07■□□□□ 0.32
SF3A2-207ENST00000592839 PSMA5P28066 241 aa17.07■□□□□ 0.32
SF3A2-207ENST00000592839 CCL23P55773 120 aa17.07■□□□□ 0.32
SF3A2-207ENST00000592839 PTK7Q13308 1070 aa17.07■□□□□ 0.32
SF3A2-207ENST00000592839 AP3B2Q13367 1082 aa17.07■□□□□ 0.32
SF3A2-207ENST00000592839 PTGISQ16647 500 aa17.07■□□□□ 0.32
SF3A2-207ENST00000592839 KIAA0753Q2KHM9 967 aa17.07■□□□□ 0.32
SF3A2-207ENST00000592839 FAM47CQ5HY64 1035 aa17.07■□□□□ 0.32
SF3A2-207ENST00000592839 TRAF7Q6Q0C0 670 aa17.07■□□□□ 0.32
SF3A2-207ENST00000592839 BLOC1S2Q6QNY1 142 aa17.07■□□□□ 0.32
SF3A2-207ENST00000592839 NLRX1Q86UT6 975 aa17.07■□□□□ 0.32
SF3A2-207ENST00000592839 TCEANC2Q96MN5 208 aa17.07■□□□□ 0.32
SF3A2-207ENST00000592839 GPR20Q99678 358 aa17.07■□□□□ 0.32
SF3A2-207ENST00000592839 ZSWIM6Q9HCJ5 1215 aa17.07■□□□□ 0.32
SF3A2-207ENST00000592839 CXXC1Q9P0U4 656 aaPredicted RBP17.07■□□□□ 0.32
SF3A2-207ENST00000592839 HDAC6Q9UBN7 1215 aa17.07■□□□□ 0.32
SF3A2-207ENST00000592839 MYO9BQ13459 2157 aa17.06■□□□□ 0.32
SF3A2-207ENST00000592839 GOLGA8AA7E2F4 631 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms